Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.7e-164 582.8 343 100.0
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.7e-77 292.4 281 65.1
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 8.6e-63 245.0 190 72.6
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 5.5e-62 242.3 155 86.5
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.2e-45 188.0 99 91.9
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 3.6e-45 186.4 143 70.6
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 6.8e-44 182.2 478 36.8
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.7e-39 167.5 387 36.2
Sopen10g027270 Solanum pennellii HOM05D004064 ORTHO05D009909 2.6e-35 153.7 173 53.8
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.0e-32 142.5 295 41.4
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.6e-31 139.0 363 33.3
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 1.1e-30 138.3 89 75.3
Sopen04g019260 Solanum pennellii HOM05D004064 ORTHO05D009909 1.5e-30 137.9 89 83.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-28 131.3 354 36.2
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 3.1e-28 130.2 99 66.7
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 1.2e-27 128.3 99 67.7
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.5e-27 127.9 89 68.5
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.4e-27 126.7 393 30.5
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.8e-27 125.9 132 53.8
CAN.G391.3 Capsicum annuum HOM05D004064 ORTHO05D009561 9.9e-27 125.2 98 68.4
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-25 121.7 89 66.3
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-25 120.6 382 31.7
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 6.0e-24 115.9 84 73.8
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 1.7e-23 114.4 93 64.5
CAN.G293.7 Capsicum annuum HOM05D004064 ORTHO05D009561 1.1e-22 111.7 159 48.4
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 5.6e-22 109.4 553 25.1
CAN.G321.28 Capsicum annuum HOM05D004064 ORTHO05D009909 9.6e-22 108.6 276 34.8
Solyc05g039910.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 1.4e-20 104.8 75 77.3
PGSC0003DMG400016298 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.9e-20 102.4 57 89.5
CAN.G548.9 Capsicum annuum HOM05D004064 ORTHO05D009561 1.2e-19 101.7 77 67.5
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.4e-19 100.1 77 63.6
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 4.4e-19 99.8 508 27.2
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 5.8e-19 99.4 126 48.4
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 5.8e-19 99.4 126 48.4
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 5.8e-19 99.4 126 48.4
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 5.8e-19 99.4 126 48.4
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 5.8e-19 99.4 126 48.4
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-19 98.6 126 48.4
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 9.9e-19 98.6 118 50.0
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.3e-18 98.2 140 45.0
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.2e-18 97.4 243 33.7
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 2.9e-18 97.1 126 47.6
CAN.G2.10 Capsicum annuum HOM05D004064 ORTHO05D009561 3.8e-18 96.7 73 65.8
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.8e-18 96.7 122 47.5
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 4.9e-18 96.3 126 47.6
CAN.G14.31 Capsicum annuum HOM05D003318 ORTHO05D002824 8.4e-18 95.5 112 57.1
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 8.4e-18 95.5 126 46.8
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.1e-17 95.1 126 46.8
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 3.2e-17 93.6 69 63.8
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 4.2e-17 93.2 126 46.8
Sopen01g018790 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-17 92.8 62 80.6
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 7.1e-17 92.4 126 46.0
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.2e-16 91.7 129 44.2
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 4.6e-16 89.7 126 45.2
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 1.3e-15 88.2 126 45.2
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.3e-15 87.4 96 52.1
Sopen02g005360 Solanum pennellii HOM05D004064 ORTHO05D009909 3.9e-15 86.7 68 64.7
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 3.9e-15 86.7 54 72.2
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 6.6e-15 85.9 126 44.4
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 1.1e-14 85.1 105 41.0
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 3.3e-14 83.6 108 40.7
CAN.G1740.2 Capsicum annuum HOM05D004064 ORTHO05D009561 4.3e-14 83.2 56 67.9
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-13 81.3 111 40.5
PGSC0003DMG400001253 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.6e-13 81.3 63 68.3
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.8e-13 80.5 76 55.3
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 2.8e-13 80.5 152 37.5
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-13 80.5 111 39.6
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.8e-13 80.5 111 39.6
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.6e-13 80.1 306 28.4
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.6e-13 80.1 331 26.6
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 3.6e-13 80.1 55 63.6
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-13 80.1 111 38.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-13 80.1 111 38.7
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-13 80.1 111 38.7
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-13 80.1 111 38.7
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-13 80.1 111 38.7
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-13 80.1 111 38.7
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.8e-13 79.7 100 47.0
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 4.8e-13 79.7 108 39.8
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 6.2e-13 79.3 87 52.9
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-12 78.2 86 46.5
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 1.8e-12 77.8 105 38.1
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 3.1e-12 77.0 111 39.6
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 76.6 80 48.8
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-12 76.3 112 40.2
Sopen07g007160 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-12 76.3 66 59.1
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 6.9e-12 75.9 83 45.8
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.5e-11 74.7 107 37.4
PGSC0003DMG400006499 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.5e-11 74.7 98 51.0
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.5e-11 74.7 125 39.2
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 2.0e-11 74.3 110 39.1
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 2.6e-11 73.9 147 33.3
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.6e-11 73.9 63 50.8
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 5.8e-11 72.8 71 53.5
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.8e-11 72.8 100 45.0
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 7.6e-11 72.4 143 34.3
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 7.6e-11 72.4 110 37.3
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 9.9e-11 72.0 95 40.0
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 9.9e-11 72.0 77 51.9
Sopen11g024290 Solanum pennellii HOM05D004064 ORTHO05D009909 9.9e-11 72.0 102 43.1
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 1.7e-10 71.2 109 38.5
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 2.2e-10 70.9 107 42.1
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 2.2e-10 70.9 75 46.7
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 2.2e-10 70.9 111 35.1
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.2e-10 70.9 109 38.5
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.9e-10 70.5 113 42.5
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.8e-10 70.1 112 35.7
CAN.G508.20 Capsicum annuum HOM05D004064 ORTHO05D009909 4.9e-10 69.7 60 58.3
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 6.4e-10 69.3 102 42.2
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 6.4e-10 69.3 109 41.3
Sopen08g005320 Solanum pennellii HOM05D000004 ORTHO05D003926 6.4e-10 69.3 77 54.5
Solyc12g041930.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 8.4e-10 68.9 73 53.4
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 8.4e-10 68.9 109 41.3
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 1.1e-09 68.6 102 42.2
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.9e-09 67.8 335 28.1
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.9e-09 67.8 69 47.8
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 2.4e-09 67.4 139 35.3
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 3.2e-09 67.0 115 33.0
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 3.2e-09 67.0 126 38.1
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 3.2e-09 67.0 98 40.8
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.2e-09 66.6 60 45.0
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 4.2e-09 66.6 128 35.2
PGSC0003DMG400029014 Solanum tuberosum HOM05D000017 ORTHO05D009909 4.2e-09 66.6 71 47.9
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.4e-09 66.2 101 43.6
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-09 66.2 88 44.3
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 7.1e-09 65.9 110 37.3
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.1e-09 65.9 133 39.8
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 7.1e-09 65.9 106 38.7
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-08 65.1 272 30.1
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-08 64.7 60 45.0
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-08 64.7 132 37.9
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 1.6e-08 64.7 128 37.5
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.6e-08 64.7 73 38.4
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 3.5e-08 63.5 133 37.6
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 3.5e-08 63.5 91 38.5
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 3.5e-08 63.5 114 36.8
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 4.6e-08 63.2 92 40.2
Peaxi162Scf00385g00076 Petunia axillaris HOM05D004064 ORTHO05D009561 6.0e-08 62.8 57 52.6
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.9e-08 62.4 70 47.1
PGSC0003DMG400046490 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.9e-08 62.4 57 52.6
CAN.G268.15 Capsicum annuum HOM05D004064 ORTHO05D009561 1.0e-07 62.0 37 81.1
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 1.0e-07 62.0 55 49.1
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-07 61.2 104 37.5
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-07 60.8 105 35.2
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 2.3e-07 60.8 81 46.9
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.0e-07 60.5 40 57.5
PGSC0003DMG400039930 Solanum tuberosum HOM05D000017 ORTHO05D009909 3.0e-07 60.5 95 41.1
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 3.9e-07 60.1 132 31.8
CAN.G2504.1 Capsicum annuum HOM05D004064 ORTHO05D009909 5.1e-07 59.7 64 42.2
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 6.7e-07 59.3 86 40.7
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.7e-07 59.3 126 33.3
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 6.7e-07 59.3 81 40.7
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 8.7e-07 58.9 70 41.4
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 8.7e-07 58.9 98 33.7
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 1.1e-06 58.5 88 42.0
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-06 57.8 63 46.0
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-06 57.8 95 41.1
Peaxi162Scf00066g01917 Petunia axillaris HOM05D000017 ORTHO05D015725 3.3e-06 57.0 324 24.4
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 3.3e-06 57.0 96 40.6
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 5.6e-06 56.2 118 39.8
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.4e-06 55.8 86 44.2
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 9.6e-06 55.5 95 38.9
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 38.9


User provided reference genes

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