Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.6e-39 164.9 79 100.0
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.1e-33 145.2 77 87.0
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.1e-32 141.4 77 85.7
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 3.1e-32 141.4 77 85.7
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 3.1e-32 141.4 73 89.0
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 4.0e-32 141.0 77 83.1
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.5e-31 139.0 78 82.1
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 3.4e-31 137.9 77 80.5
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 3.4e-31 137.9 77 83.1
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.9e-30 134.8 77 80.5
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.7e-28 128.3 67 89.6
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.1e-27 124.0 77 75.3
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 7.3e-26 120.2 67 80.6
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 9.6e-26 119.8 73 75.3
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.8e-23 110.5 66 75.8
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 4.2e-21 104.4 77 59.7
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 9.3e-21 103.2 68 63.2
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 1.0e-19 99.8 77 53.2
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.0e-19 99.8 77 54.5
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 3.0e-19 98.2 77 55.8
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 3.9e-19 97.8 77 51.9
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 5.1e-19 97.4 77 54.5
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 5.1e-19 97.4 77 54.5
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 5.1e-19 97.4 77 54.5
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 5.1e-19 97.4 77 48.1
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 6.6e-19 97.1 77 55.8
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 8.7e-19 96.7 77 54.5
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.1e-18 96.3 77 51.9
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.1e-18 96.3 77 55.8
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.1e-18 96.3 77 55.8
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 1.1e-18 96.3 77 57.1
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.5e-18 95.9 77 53.2
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 1.9e-18 95.5 77 53.2
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 2.5e-18 95.1 77 51.9
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 2.5e-18 95.1 77 51.9
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 3.3e-18 94.7 77 51.9
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 4.3e-18 94.4 77 51.9
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 4.3e-18 94.4 77 51.9
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 5.6e-18 94.0 77 54.5
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 5.6e-18 94.0 77 50.6
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 5.6e-18 94.0 77 49.4
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 7.3e-18 93.6 77 53.2
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 9.6e-18 93.2 77 49.4
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 9.6e-18 93.2 77 51.9
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 1.3e-17 92.8 77 57.1
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 1.3e-17 92.8 77 50.6
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.3e-17 92.8 77 51.9
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.3e-17 92.8 77 48.1
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.6e-17 92.4 77 51.9
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.1e-17 92.0 77 51.9
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 2.1e-17 92.0 77 51.9
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 2.8e-17 91.7 77 49.4
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 3.6e-17 91.3 77 49.4
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 3.6e-17 91.3 77 49.4
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.6e-17 91.3 73 56.2
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 3.6e-17 91.3 73 53.4
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.8e-17 90.9 67 59.7
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 6.2e-17 90.5 77 51.9
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 8.1e-17 90.1 77 53.2
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 8.1e-17 90.1 74 54.1
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 8.1e-17 90.1 77 49.4
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 8.1e-17 90.1 77 50.6
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 8.1e-17 90.1 65 61.5
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 1.4e-16 89.4 77 48.1
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.4e-16 89.4 77 50.6
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.8e-16 89.0 77 50.6
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.8e-16 89.0 77 51.9
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 2.4e-16 88.6 77 49.4
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.4e-16 88.6 77 50.6
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 3.1e-16 88.2 77 46.8
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.1e-16 88.2 77 50.6
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 3.1e-16 88.2 77 49.4
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 3.1e-16 88.2 77 50.6
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 5.3e-16 87.4 77 51.9
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 9.0e-16 86.7 77 46.8
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.2e-15 86.3 74 52.7
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 1.2e-15 86.3 77 48.1
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 2.0e-15 85.5 77 48.1
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.0e-15 85.5 69 53.6
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 2.0e-15 85.5 87 47.1
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 2.6e-15 85.1 74 50.0
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 4.5e-15 84.3 77 49.4
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 2.2e-14 82.0 77 45.5
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 3.8e-14 81.3 74 48.6
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.9e-14 80.9 62 54.8
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 4.9e-14 80.9 77 40.3
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 6.4e-14 80.5 77 42.9
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 6.4e-14 80.5 77 40.3
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 8.4e-14 80.1 77 58.4
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 1.9e-13 79.0 77 46.8
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.2e-12 76.3 88 47.7
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 7.9e-12 73.6 73 41.1
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.5e-10 69.3 76 40.8
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 5.6e-10 67.4 73 38.4
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 1.1e-08 63.2 83 39.8
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 2.6e-07 58.5 53 47.2
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 3.4e-07 58.2 45 53.3
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 4.5e-07 57.8 51 49.0
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 9.9e-07 56.6 59 40.7
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 2.2e-06 55.5 78 33.3
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 6.4e-06 53.9 68 35.3


User provided reference genes

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