Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.5e-171 606.7 459 100.0
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 3.7e-146 522.3 402 88.6
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 5.9e-144 515.0 393 92.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 9.8e-131 471.1 416 83.2
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 2.6e-123 446.4 426 79.1
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 4.6e-96 355.9 421 65.6
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 7.9e-96 355.1 434 67.3
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.0e-95 354.8 408 69.6
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.9e-95 352.8 426 66.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.9e-95 352.8 411 59.9
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 5.1e-95 352.4 409 66.7
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 5.6e-94 349.0 417 69.1
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 7.4e-94 348.6 404 66.3
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 9.6e-94 348.2 413 66.8
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.6e-93 347.4 413 64.2
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 2.8e-93 346.7 399 69.7
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 4.8e-93 345.9 406 70.9
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.4e-92 344.4 408 65.9
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.1e-92 343.2 403 64.0
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 6.9e-92 342.0 404 66.6
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.2e-91 341.3 415 68.2
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 3.4e-91 339.7 424 59.0
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 9.9e-91 338.2 403 69.5
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 2.9e-90 336.7 396 67.4
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 3.8e-90 336.3 411 67.9
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.1e-89 334.7 411 72.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.1e-89 334.7 392 67.1
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 1.1e-89 334.7 410 66.8
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.4e-89 334.3 423 63.4
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.2e-89 333.2 405 66.2
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 4.2e-89 332.8 397 67.0
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.2e-89 332.8 389 66.8
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.2e-88 331.3 413 56.4
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 2.1e-88 330.5 394 67.3
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.7e-88 330.1 418 68.4
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 7.9e-88 328.6 364 69.0
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.3e-87 327.8 410 64.6
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 3.0e-87 326.6 410 68.0
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 6.7e-87 325.5 401 63.3
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 3.3e-86 323.2 410 69.3
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 9.6e-86 321.6 402 67.2
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 3.7e-85 319.7 418 65.8
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 4.8e-85 319.3 400 69.2
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.4e-84 317.8 404 65.6
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 3.1e-84 316.6 372 66.1
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 6.9e-84 315.5 419 61.3
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 6.9e-84 315.5 419 65.2
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.2e-83 314.7 410 65.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 2.6e-83 313.5 370 67.6
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.4e-83 313.2 293 68.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.4e-83 313.2 293 68.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 4.5e-83 312.8 408 64.0
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 5.8e-83 312.4 413 67.1
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 2.2e-82 310.5 261 65.5
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.9e-82 309.3 425 56.5
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 8.4e-82 308.5 207 79.2
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.1e-81 308.1 409 66.3
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.5e-81 307.0 209 78.5
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 3.2e-81 306.6 414 65.5
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 4.2e-81 306.2 402 61.9
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 4.2e-81 306.2 391 62.4
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 7.1e-81 305.4 414 65.2
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.2e-80 304.7 455 56.3
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.6e-80 304.3 270 72.6
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.1e-80 303.9 250 69.6
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 3.0e-79 300.1 416 61.5
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.1e-79 299.3 421 63.9
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.1e-78 298.1 405 61.5
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.9e-78 297.4 396 63.1
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.5e-78 297.0 410 52.0
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 4.3e-78 296.2 247 70.9
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 9.7e-78 295.0 402 61.2
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.2e-77 293.9 424 59.0
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 6.3e-77 292.4 267 67.4
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.1e-76 291.6 413 60.3
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.8e-76 290.8 251 68.1
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 9.0e-76 288.5 420 64.3
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.5e-75 287.7 356 64.0
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.5e-75 287.7 442 58.8
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 7.2e-73 278.9 431 57.3
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 2.7e-72 276.9 209 74.6
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.0e-71 275.0 215 73.5
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 3.0e-71 273.5 440 56.6
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.8e-69 266.9 407 62.9
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 8.2e-69 265.4 230 63.0
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.9e-68 262.3 166 77.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.6e-67 260.4 390 62.8
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.2e-64 251.5 315 59.0
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.8e-63 245.4 160 73.8
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.5e-62 244.6 215 65.6
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.3e-61 241.5 213 64.8
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 2.8e-61 240.4 214 65.0
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 8.2e-61 238.8 147 78.2
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 5.3e-60 236.1 165 71.5
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 4.5e-59 233.0 168 70.2
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 6.1e-56 222.6 165 66.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 3.0e-55 220.3 370 64.6
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 3.9e-55 219.9 252 52.8
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 5.7e-54 216.1 164 64.0
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.2e-49 199.9 167 61.1
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.2e-49 199.9 167 61.1
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 7.2e-49 199.1 163 60.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 7.2e-49 199.1 163 60.7
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 2.8e-37 160.6 152 56.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 3.3e-33 147.1 222 45.9
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 1.3e-29 135.2 168 46.4
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.0e-26 125.6 184 46.7
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 3.4e-22 110.5 164 40.2
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 6.0e-19 99.8 63 77.8
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 2.3e-15 87.8 139 36.0
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 3.4e-14 84.0 83 85.5
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 4.1e-12 77.0 117 40.2
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 5.4e-12 76.6 282 53.2
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.9e-09 68.2 95 43.2
HPP92_023605 Vanilla planifolia HOM05D006571 ORTHO05D007771 1.5e-06 58.5 113 46.0
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.5e-06 58.5 82 40.2
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 2.6e-06 57.8 115 33.9


User provided reference genes

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