Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.4e-137 492.3 265 100.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 4.5e-136 488.0 265 98.5
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.1e-131 473.4 265 95.5
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.0e-131 472.6 265 94.7
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 1.7e-127 459.5 253 98.8
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 6.3e-122 441.0 265 86.4
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.1e-121 440.3 265 86.8
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 3.1e-121 438.7 265 86.8
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 3.1e-121 438.7 265 86.4
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 4.1e-121 438.3 265 87.2
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 4.1e-121 438.3 265 86.4
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 9.1e-121 437.2 265 87.2
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 9.1e-121 437.2 265 86.8
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 5.9e-120 434.5 265 86.4
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.7e-120 434.1 265 85.3
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.0e-119 433.7 265 86.4
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.3e-119 433.3 241 97.1
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 2.9e-119 432.2 265 85.3
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.8e-119 431.8 265 85.3
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 6.5e-119 431.0 265 85.7
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 8.5e-119 430.6 263 85.9
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 8.5e-119 430.6 265 86.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.1e-118 430.3 265 85.3
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 83.8
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 85.7
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.2
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 84.2
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 84.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 85.7
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 84.9
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 9.4e-118 427.2 262 84.0
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 85.3
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.7e-117 425.6 265 83.4
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.6e-117 425.2 263 85.9
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 3.6e-117 425.2 264 84.8
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 6.1e-117 424.5 265 83.8
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 6.1e-117 424.5 265 85.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.0e-116 423.7 265 82.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 3.0e-116 422.2 278 81.7
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 83.0
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 3.9e-116 421.8 265 84.2
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 3.9e-116 421.8 264 83.7
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 83.8
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 84.2
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.1e-115 420.2 274 82.5
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.5e-115 419.9 260 83.8
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.5e-115 419.9 260 83.8
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 1.5e-115 419.9 265 82.6
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.5e-115 419.9 263 84.0
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.0e-115 419.5 260 83.8
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 3.3e-115 418.7 264 83.0
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 3.3e-115 418.7 258 85.3
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.3e-114 416.8 260 83.5
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.3e-114 416.8 260 83.5
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 81.1
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.8e-114 415.6 263 82.5
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 3.7e-114 415.2 264 81.8
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 3.7e-114 415.2 262 82.4
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.1e-113 413.7 264 81.8
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 1.4e-113 413.3 265 83.0
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.8e-113 412.9 262 81.7
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.8e-113 412.9 262 82.1
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 2.4e-113 412.5 262 82.1
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 2.4e-113 412.5 262 81.7
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.1e-113 412.1 255 84.3
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 5.3e-113 411.4 272 79.4
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 9.1e-113 410.6 261 80.1
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.2e-112 410.2 258 84.1
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 1.2e-112 410.2 260 81.5
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 1.2e-112 410.2 260 81.5
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 2.6e-112 409.1 265 80.4
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 3.5e-112 408.7 259 82.2
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 3.5e-112 408.7 263 80.6
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 5.9e-112 407.9 265 81.1
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 5.9e-112 407.9 263 81.7
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 7.7e-112 407.5 263 81.7
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 7.7e-112 407.5 263 81.0
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 1.7e-111 406.4 265 80.4
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.9e-111 405.6 253 85.0
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.9e-111 405.6 263 81.0
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 3.8e-111 405.2 262 81.3
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 5.0e-111 404.8 263 81.0
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 6.5e-111 404.4 262 79.8
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 6.5e-111 404.4 263 81.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 6.5e-111 404.4 258 83.7
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 8.5e-111 404.1 262 78.6
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.9e-110 402.9 259 82.6
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 2.5e-110 402.5 263 82.9
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 9.4e-110 400.6 263 79.1
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.2e-109 400.2 265 80.0
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.6e-109 399.8 262 80.5
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.6e-109 399.8 258 82.6
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.7e-109 399.1 253 84.6
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 8.0e-109 397.5 251 83.7
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 4.0e-108 395.2 253 83.8
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 5.2e-108 394.8 259 81.1
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 8.8e-108 394.0 286 75.9
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 3.3e-107 392.1 287 76.3
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 4.8e-106 388.3 257 78.6
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.4e-105 386.7 264 76.9
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.4e-105 386.7 262 76.7
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.0e-104 382.9 238 84.5
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.7e-104 380.9 257 80.2
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 7.7e-104 380.9 259 77.2
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.9e-103 379.0 225 88.4
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 2.7e-101 372.5 225 86.7
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.4e-100 370.2 265 72.8
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 4.0e-100 368.6 265 76.2
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.7e-98 363.2 262 72.1
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.2e-98 362.8 264 72.0
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.6e-96 356.7 262 70.6
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.5e-94 347.4 262 67.9
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 3.6e-93 345.5 265 72.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.9e-92 340.9 258 69.0
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 5.2e-84 315.1 252 67.9
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 8.9e-84 314.3 212 80.7
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 6.2e-77 291.6 265 66.4
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 3.4e-67 259.2 254 54.3
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.4e-65 253.1 179 73.2
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 9.2e-65 251.1 161 81.4
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.2e-61 240.7 152 84.2
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.8e-58 229.2 154 81.8
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.3e-52 208.8 265 50.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.2e-51 207.6 243 42.8
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.3e-47 194.1 252 41.3
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.9e-39 166.0 233 42.1
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 3.1e-36 156.4 98 79.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 9.3e-33 144.8 96 79.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.8e-31 140.6 239 35.6
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 6.7e-31 138.7 119 63.9
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-30 137.9 77 94.8
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.3e-28 129.0 75 90.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.3e-23 114.4 232 34.9
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 7.4e-22 108.6 101 66.3
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.0e-10 71.6 51 74.5
Actinidia13116 Actinidia chinensis HOM05D000001 ORTHO05D009676 4.4e-06 56.2 47 59.6


User provided reference genes

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