Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 6.1e-199 697.2 330 100.0
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 3.6e-167 591.7 321 88.5
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 8.3e-164 580.5 321 88.2
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.5e-160 569.7 333 82.3
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 4.4e-157 558.1 326 81.9
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.8e-155 552.7 330 80.9
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 5.4e-155 551.2 323 81.7
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 6.6e-129 464.5 325 66.8
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 8.6e-129 464.2 325 66.5
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 5.6e-128 461.5 324 66.4
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.8e-126 456.4 321 67.0
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 1.2e-125 453.8 324 65.4
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 5.8e-125 451.4 323 65.9
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 5.4e-123 444.9 325 64.6
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.0e-121 439.1 317 65.9
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 2.1e-119 433.0 325 63.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.4e-118 430.3 320 63.4
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 9.0e-118 427.6 324 63.0
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 2.6e-117 426.0 327 61.5
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 9.9e-117 424.1 323 60.7
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 9.9e-117 424.1 323 62.2
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 1.3e-116 423.7 323 62.8
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 2.2e-116 422.9 324 62.7
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 3.8e-116 422.2 320 62.5
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 6.4e-116 421.4 325 61.5
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 4.2e-115 418.7 326 62.3
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.2e-114 417.2 327 60.9
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.6e-114 416.8 327 60.2
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.6e-114 416.8 327 60.2
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 4.6e-114 415.2 319 61.8
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 6.0e-114 414.8 318 62.3
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 7.8e-114 414.5 317 63.4
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.3e-113 413.7 340 60.9
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 1.7e-113 413.3 323 61.0
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 3.0e-113 412.5 326 61.7
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 3.9e-113 412.1 325 59.4
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 5.1e-113 411.8 327 59.6
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 6.6e-113 411.4 323 60.1
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 8.7e-113 411.0 324 60.5
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 2.5e-112 409.5 322 59.9
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 4.3e-112 408.7 324 61.1
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 7.3e-112 407.9 322 59.3
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 7.3e-112 407.9 322 58.4
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 2.1e-111 406.4 321 61.1
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 4.8e-111 405.2 320 60.0
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 6.2e-111 404.8 320 61.2
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 6.2e-111 404.8 324 59.3
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 1.8e-110 403.3 325 57.8
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.0e-110 402.1 321 61.1
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 9.0e-110 401.0 325 58.8
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 1.2e-109 400.6 322 60.2
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 1.5e-109 400.2 323 59.1
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 2.6e-109 399.4 320 59.7
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.6e-109 399.4 320 59.4
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 2.6e-109 399.4 314 59.2
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 3.4e-109 399.1 320 60.0
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 7.6e-109 397.9 322 59.6
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 2.9e-108 396.0 324 58.3
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 4.9e-108 395.2 326 58.9
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 6.4e-108 394.8 321 60.4
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 8.4e-108 394.4 320 59.4
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 2.4e-107 392.9 322 58.4
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 5.4e-107 391.7 320 59.1
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 7.1e-107 391.3 317 59.6
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 9.3e-107 391.0 321 59.8
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.6e-106 390.2 326 58.3
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.1e-106 389.8 322 59.0
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.5e-106 389.0 317 59.3
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.6e-106 388.7 321 59.8
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 4.6e-106 388.7 321 58.6
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 4.6e-106 388.7 442 47.3
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 1.8e-105 386.7 440 47.0
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.0e-105 386.0 317 59.0
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 5.1e-105 385.2 322 57.8
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 6.7e-105 384.8 319 59.9
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 6.7e-105 384.8 324 56.5
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.5e-104 383.6 320 58.4
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 1.5e-104 383.6 317 57.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.5e-104 382.9 317 58.4
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 4.3e-104 382.1 321 57.9
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 9.6e-104 380.9 321 57.9
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 9.6e-104 380.9 321 57.9
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 2.1e-103 379.8 317 57.4
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 3.7e-103 379.0 311 58.2
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 1.4e-102 377.1 322 57.1
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 3.1e-102 375.9 321 57.6
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.2e-101 374.0 291 61.2
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.6e-101 372.9 322 59.3
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 8.4e-100 367.9 319 56.1
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 4.2e-99 365.5 340 54.4
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 2.1e-98 363.2 316 55.4
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 4.3e-96 355.5 322 53.4
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.7e-92 343.6 316 54.1
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 5.0e-92 342.0 318 53.1
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 3.7e-87 325.9 321 51.4
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 6.3e-87 325.1 320 49.1
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.1e-86 324.3 322 49.1
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.8e-86 323.6 319 52.7
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 3.2e-75 286.2 249 56.6
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.8e-71 272.3 321 42.7
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 1.2e-69 267.7 325 42.2
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.5e-61 239.6 318 38.4
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 3.8e-60 236.1 208 56.7
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 1.0e-52 211.5 152 66.4
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.6e-50 204.1 320 36.2
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.7e-47 193.0 284 36.6
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 7.2e-43 178.7 113 69.0
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.0e-36 158.3 111 63.1
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 9.8e-32 141.7 85 68.2
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 5.8e-08 62.8 70 51.4


User provided reference genes

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