Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 9.1e-66 253.4 130 100.0
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 5.7e-60 234.2 124 95.2
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 3.7e-59 231.5 124 94.4
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 4.4e-52 208.0 124 84.7
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 2.2e-51 205.7 124 83.9
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 1.1e-47 193.4 120 80.8
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 2.1e-33 146.0 125 59.2
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 8.6e-32 140.6 123 59.3
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 1.4e-29 133.3 126 52.4
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 1.8e-29 132.9 126 53.2
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.2e-28 130.2 124 51.6
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 2.0e-28 129.4 124 54.0
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 7.5e-28 127.5 124 52.4
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 1.7e-27 126.3 122 55.7
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 2.9e-27 125.6 123 51.2
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 3.7e-27 125.2 127 48.8
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 6.4e-27 124.4 125 49.6
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 6.4e-27 124.4 124 50.0
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 6.4e-27 124.4 123 52.0
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 8.3e-27 124.0 124 51.6
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 8.3e-27 124.0 123 49.6
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 3.2e-26 122.1 124 54.0
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 4.1e-26 121.7 124 51.6
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 4.1e-26 121.7 124 52.4
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 5.4e-26 121.3 124 52.4
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 7.1e-26 120.9 121 52.1
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 7.1e-26 120.9 124 52.4
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 1.6e-25 119.8 127 48.8
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 2.7e-25 119.0 125 53.6
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 3.5e-25 118.6 124 48.4
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 6.0e-25 117.9 122 50.8
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 1.3e-24 116.7 124 47.6
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 1.3e-24 116.7 124 47.6
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.7e-24 116.3 115 50.4
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 2.3e-24 115.9 121 47.9
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 2.3e-24 115.9 121 47.9
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 5.1e-24 114.8 121 48.8
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 5.1e-24 114.8 123 49.6
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 6.6e-24 114.4 115 49.6
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 6.6e-24 114.4 122 51.6
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 6.6e-24 114.4 124 48.4
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 6.6e-24 114.4 122 47.5
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 1.1e-23 113.6 123 49.6
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 1.9e-23 112.8 126 47.6
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 2.5e-23 112.5 123 45.5
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 2.5e-23 112.5 121 47.9
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 4.3e-23 111.7 122 47.5
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 5.6e-23 111.3 125 43.2
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 7.3e-23 110.9 124 48.4
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 9.5e-23 110.5 126 46.8
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.1e-22 109.4 124 49.2
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 3.6e-22 108.6 123 48.0
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.6e-22 108.6 124 49.2
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 3.6e-22 108.6 122 44.3
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 4.7e-22 108.2 123 47.2
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 6.2e-22 107.8 124 48.4
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.4e-21 106.7 124 48.4
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 2.4e-21 105.9 124 48.4
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 6.8e-21 104.4 127 44.9
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 8.9e-21 104.0 127 44.9
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 1.5e-20 103.2 122 43.4
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 2.0e-20 102.8 124 48.4
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 2.0e-20 102.8 127 42.5
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 2.6e-20 102.4 124 45.2
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 2.6e-20 102.4 124 45.2
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 4.4e-20 101.7 112 48.2
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 5.8e-20 101.3 127 50.4
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 2.2e-19 99.4 118 42.4
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 2.9e-19 99.0 131 42.7
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 8.4e-19 97.4 105 45.7
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 8.4e-19 97.4 131 40.5
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 1.9e-18 96.3 126 42.9
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.4e-18 95.9 120 42.5
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 4.2e-18 95.1 91 54.9
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 4.2e-18 95.1 159 36.5
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 5.4e-18 94.7 128 39.1
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 5.4e-18 94.7 124 38.7
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 7.1e-18 94.4 121 39.7
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 2.7e-17 92.4 125 40.0
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 2.7e-17 92.4 122 44.3
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 2.7e-17 92.4 128 43.0
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 6.0e-17 91.3 123 40.7
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 2.3e-16 89.4 125 39.2
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 3.0e-16 89.0 129 38.8
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 3.0e-16 89.0 127 40.9
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 3.9e-16 88.6 112 43.8
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 1.1e-15 87.0 118 41.5
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 1.9e-15 86.3 121 41.3
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 3.3e-15 85.5 127 35.4
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 3.3e-15 85.5 127 34.6
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 3.3e-15 85.5 124 40.3
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 4.3e-15 85.1 152 35.5
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 5.6e-15 84.7 127 33.1
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 5.6e-15 84.7 127 33.1
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 5.6e-15 84.7 127 33.1
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 1.3e-14 83.6 122 33.6
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 1.6e-14 83.2 129 38.0
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 1.6e-14 83.2 114 39.5
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 3.6e-14 82.0 131 34.4
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 1.4e-13 80.1 127 32.3
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 1.8e-13 79.7 82 47.6
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 2.4e-13 79.3 129 36.4
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.1e-13 79.0 92 43.5
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 3.4e-12 75.5 120 35.0
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 2.2e-11 72.8 114 36.8
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 1.4e-10 70.1 80 45.0
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 2.4e-10 69.3 117 32.5
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 3.5e-09 65.5 213 26.8
SEGI_11604 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 6.0e-09 64.7 101 34.7
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 3.0e-08 62.4 63 49.2
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 5.1e-08 61.6 68 47.1
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 2.5e-07 59.3 64 53.1


User provided reference genes

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