Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 3.0e-128 461.8 231 100.0
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 1.4e-109 399.8 233 88.4
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 1.6e-25 120.6 231 37.7
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 2.2e-22 110.2 235 37.0
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 4.6e-20 102.4 236 34.3
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 6.0e-20 102.1 236 35.2
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 8.7e-19 98.2 233 35.6
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 8.7e-19 98.2 234 33.3
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 1.9e-18 97.1 235 33.2
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 3.3e-18 96.3 235 33.6
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 2.8e-17 93.2 233 34.8
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 3.7e-17 92.8 235 35.7
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 3.7e-17 92.8 231 33.8
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 1.8e-16 90.5 255 31.4
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 2.4e-16 90.1 246 31.7
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 3.1e-16 89.7 239 33.5
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.2e-15 87.8 232 32.3
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 1.2e-15 87.8 232 31.9
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 1.5e-15 87.4 223 29.6
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 1.5e-15 87.4 235 35.3
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 2.0e-15 87.0 233 32.2
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 2.0e-15 87.0 237 32.9
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.0e-15 87.0 234 32.5
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.4e-15 86.3 223 29.6
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 3.4e-15 86.3 239 31.0
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 4.5e-15 85.9 233 33.5
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 4.5e-15 85.9 231 34.2
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 4.5e-15 85.9 238 33.6
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.0e-14 84.7 237 30.0
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 1.3e-14 84.3 240 30.8
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 1.7e-14 84.0 235 30.6
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 2.2e-14 83.6 231 33.3
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 2.9e-14 83.2 227 30.4
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 2.9e-14 83.2 261 28.7
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 1.4e-13 80.9 234 30.8
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 1.4e-13 80.9 240 32.9
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 1.9e-13 80.5 240 29.2
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 2.5e-13 80.1 247 31.6
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 3.2e-13 79.7 232 29.3
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 4.2e-13 79.3 229 31.4
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 5.5e-13 79.0 242 30.2
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 7.1e-13 78.6 242 28.9
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 9.3e-13 78.2 233 30.5
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 1.2e-12 77.8 233 29.6
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 1.2e-12 77.8 233 31.3
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 2.1e-12 77.0 236 27.1
EL10Ac3g05005 Beta vulgaris HOM05D007526 ORTHO05D009350 2.7e-12 76.6 245 30.2
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 2.7e-12 76.6 232 31.0
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 2.7e-12 76.6 237 31.6
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 3.5e-12 76.3 240 30.8
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 3.5e-12 76.3 238 32.8
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 3.5e-12 76.3 216 28.7
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 1.0e-11 74.7 242 31.0
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.3e-11 74.3 228 31.1
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 1.8e-11 73.9 229 29.3
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 1.8e-11 73.9 235 28.9
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 3.9e-11 72.8 213 31.0
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 2.5e-10 70.1 238 29.8
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 3.3e-10 69.7 59 61.0
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 5.7e-10 68.9 217 29.0
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 5.7e-10 68.9 232 32.3
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 2.2e-09 67.0 258 30.2
AUR62015571 Chenopodium quinoa HOM05D007526 ORTHO05D009350 2.2e-09 67.0 247 30.4
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 2.2e-09 67.0 226 30.1
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 3.7e-09 66.2 184 29.3
Lsat_1_v5_gn_3_120620 Lactuca sativa HOM05D064852 ORTHO05D009350 6.3e-09 65.5 153 34.6
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 8.2e-09 65.1 227 30.4
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.4e-08 64.3 221 29.0
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 2.4e-08 63.5 230 27.4
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 3.1e-08 63.2 235 26.8
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 5.3e-08 62.4 222 27.5
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 9.0e-08 61.6 224 30.4
Dinv27054 Davidia involucrata HOM05D007526 ORTHO05D009350 1.2e-07 61.2 59 54.2
Actinidia01843 Actinidia chinensis HOM05D007526 ORTHO05D009350 2.6e-07 60.1 76 43.4
COL.COLO4_15878 Corchorus olitorius HOM05D007526 ORTHO05D009350 2.6e-07 60.1 51 58.8
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 2.6e-07 60.1 224 29.5
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 3.4e-07 59.7 216 28.7
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 5.9e-07 58.9 220 30.0
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 7.7e-07 58.5 230 27.0
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.0e-06 58.2 224 27.7
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.0e-06 58.2 224 27.7
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.0e-06 58.2 222 25.2
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.3e-06 57.8 230 26.5
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 1.3e-06 57.8 223 26.9
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.7e-06 57.4 232 30.2
Migut.G00517 Erythranthe guttata HOM05D007526 ORTHO05D009350 2.2e-06 57.0 103 35.0
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.2e-06 57.0 224 27.7
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 3.8e-06 56.2 203 28.1
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 5.0e-06 55.8 245 27.8
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 6.5e-06 55.5 93 39.8
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 8.5e-06 55.1 232 28.4
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 8.5e-06 55.1 241 25.3


User provided reference genes

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