Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.2e-133 479.9 252 100.0
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.3e-132 476.5 252 98.8
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 4.1e-131 471.5 252 98.8
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 7.8e-130 467.2 252 96.0
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.2e-127 459.9 252 94.8
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.8e-127 458.8 252 94.8
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.8e-126 456.1 252 93.7
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 85.7
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 86.1
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 85.7
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.7e-116 422.9 254 86.2
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 86.9
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 85.3
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 85.7
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 84.5
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 85.7
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 84.9
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 84.5
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 84.5
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 84.5
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 5.4e-115 417.9 254 85.4
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 85.7
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.6e-114 416.4 250 83.2
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 85.3
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 82.9
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 2.7e-114 415.6 250 83.6
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.9
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 85.3
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 2.7e-114 415.6 251 83.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 82.9
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 4.6e-114 414.8 253 84.2
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 4.6e-114 414.8 252 84.5
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 84.9
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 84.5
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 84.5
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 82.9
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 83.7
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 83.7
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 81.7
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 82.9
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 2.3e-113 412.5 253 85.0
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.5
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.5
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 82.9
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.5
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 85.3
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 83.7
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 83.3
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 84.5
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 83.3
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.5e-112 409.8 248 84.7
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 83.3
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 84.5
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 84.1
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 82.9
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 83.7
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 83.3
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 83.3
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 81.7
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 83.3
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 81.3
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 81.3
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 82.1
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.8e-110 402.9 252 80.6
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.8e-110 402.9 283 76.0
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 2.4e-110 402.5 252 81.3
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 81.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 6.9e-110 401.0 281 76.5
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 6.9e-110 401.0 256 81.2
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 6.9e-110 401.0 253 80.2
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 1.2e-109 400.2 252 80.2
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 1.2e-109 400.2 252 81.0
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.2e-109 400.2 256 81.2
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 1.5e-109 399.8 252 81.7
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 81.3
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 79.4
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 82.9
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 7.6e-109 397.5 252 82.1
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 7.6e-109 397.5 254 81.5
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 9.9e-109 397.1 250 82.0
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 1.7e-108 396.4 249 82.3
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 2.2e-108 396.0 249 82.3
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 4.9e-108 394.8 260 78.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 8.4e-108 394.0 283 73.9
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 3.2e-107 392.1 249 81.9
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 3.5e-106 388.7 239 82.8
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 4.6e-106 388.3 259 79.2
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 8.7e-105 384.0 252 79.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 1.2e-101 373.6 256 74.6
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 8.4e-100 367.5 256 74.6
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 7.9e-98 360.9 252 73.0
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.0e-97 360.5 272 73.2
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 4.3e-96 355.1 221 82.4
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 3.7e-95 352.1 267 68.2
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 1.4e-94 350.1 252 71.8
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 4.5e-93 345.1 252 71.4
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 4.5e-93 345.1 254 70.1
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 2.5e-91 339.3 252 73.0
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.8e-89 333.2 255 70.6
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 1.7e-84 316.6 274 66.8
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.3e-81 306.2 190 81.1
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 6.7e-81 304.7 191 82.2
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 4.8e-79 298.5 229 69.0
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 8.2e-79 297.7 176 84.7
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.1e-78 297.4 177 84.7
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 3.1e-78 295.8 252 61.5
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.1e-75 287.3 177 82.5
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 4.6e-74 282.0 255 58.0
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 6.7e-73 278.1 280 54.3
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 3.3e-64 249.2 252 56.0
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 5.3e-62 241.9 254 52.8
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 7.7e-61 238.0 145 82.1
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 8.5e-60 234.6 146 82.2
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 9.7e-56 221.1 254 48.0
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 4.7e-50 202.2 123 82.1
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 1.8e-33 147.1 86 87.2
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 4.0e-33 146.0 96 72.9
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 1.2e-32 144.4 91 75.8
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.9e-27 127.1 95 70.5
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 2.3e-17 93.6 63 69.8
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.0e-12 78.2 48 81.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 5.2e-09 65.9 49 65.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 2.2e-07 60.5 34 79.4


User provided reference genes

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