Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017016 Solanum tuberosum HOM05D004926 ORTHO05D013907 1.5e-127 459.5 235 100.0
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 7.6e-87 324.3 207 83.1
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 9.9e-87 323.9 220 77.3
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 3.9e-75 285.4 220 73.2
Sopen12g009350 Solanum pennellii HOM05D004926 ORTHO05D013907 2.5e-74 282.7 190 79.5
PGSC0003DMG400040719 Solanum tuberosum HOM05D004926 ORTHO05D013907 1.2e-63 247.3 145 88.3
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 4.5e-63 245.4 220 63.6
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 4.2e-61 238.8 220 60.9
Solyc01g015035.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 9.1e-56 221.1 198 65.7
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-29 132.9 168 44.0
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 3.2e-29 132.9 220 41.8
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-28 129.8 171 43.3
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-26 122.9 156 42.3
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-26 122.5 150 43.3
Solyc12g015923.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 9.8e-26 121.3 144 53.5
PGSC0003DMG400021467 Solanum tuberosum HOM05D004926 ORTHO05D013907 9.8e-26 121.3 104 63.5
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-25 120.6 156 41.0
Solyc05g045675.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.2e-25 120.2 220 37.7
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-24 117.1 172 40.1
Solyc05g150114.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 1.8e-24 117.1 220 36.4
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-22 111.3 153 40.5
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-22 110.9 156 40.4
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-22 110.2 69 79.7
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.6e-22 108.6 147 39.5
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-21 107.8 147 40.1
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-21 107.5 156 38.5
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-21 107.1 146 40.4
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.5e-21 104.8 142 40.8
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-20 104.0 146 40.4
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-20 103.6 146 40.4
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-19 101.3 149 38.9
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-19 101.3 133 40.6
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-19 100.9 182 35.7
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-19 100.5 156 38.5
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-19 100.5 222 33.8
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-19 99.8 135 40.7
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-19 99.8 146 39.7
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-19 99.4 229 31.9
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 4.0e-19 99.4 77 71.4
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-18 97.4 146 39.7
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-18 97.1 205 31.7
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-18 96.7 140 37.1
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-18 95.9 131 40.5
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-18 95.9 150 39.3
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.8e-18 94.7 135 40.0
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-17 94.4 127 40.2
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-17 94.0 123 40.7
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-17 93.6 124 39.5
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-17 93.6 124 37.9
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-17 92.4 149 38.3
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-17 92.4 204 31.4
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-17 92.4 146 38.4
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-16 91.3 138 39.9
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-16 91.3 131 40.5
Nitab4.5_0006856g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-16 90.1 136 39.7
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-15 87.8 211 31.8
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-15 85.1 125 38.4
Nitab4.5_0001228g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-14 84.3 106 41.5
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-14 83.2 74 54.1
Nitab4.5_0000030g0240 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.6e-13 79.0 121 41.3
Nitab4.5_0011481g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-12 77.4 119 37.8
Solyc11g150138.1 Solanum lycopersicum HOM05D000047 ORTHO05D013907 2.8e-12 76.6 49 81.6
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-12 76.3 182 30.2
Nitab4.5_0025657g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-12 75.9 63 50.8
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.2e-12 75.5 65 50.8
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-11 73.9 63 50.8
Nitab4.5_0000248g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-11 73.2 63 52.4
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-11 72.8 125 36.0
Nitab4.5_0000058g0340 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.2e-11 72.4 106 39.6
Nitab4.5_0000276g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.9e-11 71.6 86 39.5
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-10 70.1 63 47.6
Nitab4.5_0001843g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-10 69.7 59 47.5
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 69.3 59 49.2
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 69.3 58 48.3
Nitab4.5_0002314g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 69.3 102 39.2
Nitab4.5_0002470g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 69.3 58 50.0
Nitab4.5_0005662g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 69.3 58 50.0
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-10 68.9 62 48.4
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.5e-10 68.6 59 49.2
Nitab4.5_0009292g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-09 67.4 169 31.4
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-09 67.0 59 45.8
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-09 67.0 58 48.3
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-09 66.6 117 37.6
Solyc04g025125.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.9e-09 66.6 119 42.9
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-09 66.2 145 35.2
Nitab4.5_0000276g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-09 66.2 63 46.0
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-09 66.2 106 35.8
Nitab4.5_0001685g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-09 65.9 61 49.2
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.4e-09 65.5 58 46.6
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-08 64.3 57 45.6
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-08 63.9 57 45.6
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-08 63.2 106 38.7
Nitab4.5_0000271g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.4e-08 62.4 59 45.8
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-07 60.8 58 46.6
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 1.6e-07 60.8 29 86.2
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-07 60.1 56 48.2
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.5e-07 59.7 59 42.4
Nitab4.5_0011685g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.0e-07 58.9 52 46.2
Nitab4.5_0005662g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-06 57.8 74 40.5
Nitab4.5_0000271g0150 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-06 56.2 79 39.2
Nitab4.5_0000274g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-06 56.2 101 33.7
Nitab4.5_0022423g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-06 56.2 73 41.1


User provided reference genes

Program Settings