Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 2.8e-61 238.4 120 100.0
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 6.0e-56 220.7 120 94.2
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 6.0e-56 220.7 120 94.2
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 5.0e-42 174.5 124 76.6
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 2.0e-19 99.4 99 57.6
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 4.5e-19 98.2 120 48.3
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 2.2e-18 95.9 117 48.7
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 3.8e-18 95.1 120 44.2
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 6.5e-18 94.4 104 52.9
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.4e-15 86.7 118 44.9
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 8.8e-15 84.0 131 43.5
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 1.2e-14 83.6 118 42.4
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 2.0e-14 82.8 102 43.1
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 1.3e-13 80.1 127 42.5
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.8e-13 79.0 118 44.9
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 4.8e-13 78.2 109 45.9
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 6.3e-13 77.8 123 43.9
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 1.1e-12 77.0 72 50.0
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 1.1e-12 77.0 123 39.0
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.1e-12 77.0 126 42.1
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 1.4e-12 76.6 70 54.3
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 1.8e-12 76.3 130 36.9
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.8e-12 76.3 124 42.7
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 1.8e-12 76.3 123 40.7
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 2.4e-12 75.9 126 42.1
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 5.4e-12 74.7 122 37.7
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 7.0e-12 74.3 119 42.0
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 9.1e-12 73.9 121 41.3
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.1e-12 73.9 124 42.7
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 9.1e-12 73.9 124 42.7
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 9.1e-12 73.9 123 36.6
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 9.1e-12 73.9 103 46.6
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 1.2e-11 73.6 67 52.2
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 1.2e-11 73.6 104 43.3
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 1.6e-11 73.2 117 36.8
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 2.7e-11 72.4 99 38.4
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 3.5e-11 72.0 105 40.0
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 4.5e-11 71.6 130 32.3
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 5.9e-11 71.2 123 35.0
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 5.9e-11 71.2 92 43.5
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 5.9e-11 71.2 113 41.6
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 7.7e-11 70.9 60 50.0
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.7e-11 70.9 71 50.7
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 7.7e-11 70.9 71 50.7
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 7.7e-11 70.9 91 45.1
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.0e-10 70.5 71 50.7
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 1.0e-10 70.5 122 32.8
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.3e-10 70.1 121 41.3
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 1.3e-10 70.1 121 33.9
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 1.7e-10 69.7 121 39.7
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.3e-10 69.3 90 45.6
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 2.9e-10 68.9 119 37.0
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 2.9e-10 68.9 91 41.8
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 2.9e-10 68.9 121 39.7
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 5.0e-10 68.2 120 40.8
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 5.0e-10 68.2 118 38.1
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 6.6e-10 67.8 54 53.7
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 6.6e-10 67.8 106 44.3
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 6.6e-10 67.8 106 44.3
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 8.6e-10 67.4 54 55.6
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 1.1e-09 67.0 124 37.1
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 1.1e-09 67.0 112 36.6
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 1.1e-09 67.0 106 43.4
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 1.9e-09 66.2 127 35.4
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 2.5e-09 65.9 133 36.8
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 2.5e-09 65.9 90 41.1
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 3.3e-09 65.5 119 31.9
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 3.3e-09 65.5 64 43.8
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 3.3e-09 65.5 103 40.8
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 3.3e-09 65.5 116 38.8
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 4.2e-09 65.1 62 51.6
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 4.2e-09 65.1 123 36.6
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 4.2e-09 65.1 124 33.9
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 4.2e-09 65.1 120 37.5
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.5e-09 64.7 104 38.5
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 7.2e-09 64.3 112 35.7
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.2e-08 63.5 107 40.2
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 1.6e-08 63.2 120 35.8
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.6e-08 63.2 111 39.6
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.6e-08 63.2 102 43.1
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 2.1e-08 62.8 70 44.3
MSTRG.9124 Avicennia marina HOM05D005304 ORTHO05D004438 2.8e-08 62.4 96 37.5
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.6e-08 62.0 110 35.5
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 4.7e-08 61.6 86 46.5
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 4.7e-08 61.6 117 40.2
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 6.1e-08 61.2 111 38.7
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.1e-08 61.2 111 38.7
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.1e-08 61.2 111 38.7
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 8.0e-08 60.8 123 34.1
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 1.0e-07 60.5 77 46.8
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 1.4e-07 60.1 113 33.6
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 1.4e-07 60.1 105 38.1
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.4e-07 60.1 124 33.9
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 1.8e-07 59.7 77 45.5
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 1.8e-07 59.7 99 36.4
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 1.8e-07 59.7 56 46.4
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.8e-07 59.7 120 35.0
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.2e-07 58.2 101 38.6
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 5.2e-07 58.2 88 39.8
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 6.8e-07 57.8 108 41.7
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 6.8e-07 57.8 58 44.8
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 8.9e-07 57.4 100 39.0
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 8.9e-07 57.4 121 29.8
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 8.9e-07 57.4 114 29.8
Lalb_Chr19g0129331 Lupinus albus HOM05D005304 ORTHO05D004438 8.9e-07 57.4 104 32.7
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 1.2e-06 57.0 107 35.5
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 1.5e-06 56.6 116 35.3
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 2.0e-06 56.2 104 41.3
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 2.6e-06 55.8 73 45.2
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.6e-06 55.8 102 38.2
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.6e-06 55.8 102 39.2
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 2.6e-06 55.8 106 42.5
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 3.4e-06 55.5 61 45.9
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.4e-06 55.5 104 35.6
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.4e-06 55.5 120 33.3
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 4.4e-06 55.1 118 34.7
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 4.4e-06 55.1 118 34.7
Ciclev10033003m.g Citrus clementina HOM05D005304 ORTHO05D004438 5.7e-06 54.7 86 34.9
Medtr4g056580 Medicago truncatula HOM05D014522 ORTHO05D004438 9.8e-06 53.9 99 42.4
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 9.8e-06 53.9 56 48.2


User provided reference genes

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