Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016903 Solanum tuberosum HOM05D001749 ORTHO05D001632 3.5e-92 341.7 179 100.0
Nitab4.5_0000199g0040 Nicotiana tabacum HOM05D001749 ORTHO05D001632 7.2e-21 104.8 230 40.0
Nitab4.5_0014783g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 7.2e-21 104.8 240 39.6
Oeu041631.1 Olea europaea HOM05D001749 ORTHO05D001632 8.0e-20 101.3 218 42.2
Solyc01g109810.2 Solanum lycopersicum HOM05D001749 ORTHO05D001632 8.0e-20 101.3 236 38.1
PGSC0003DMG400000718 Solanum tuberosum HOM05D001749 ORTHO05D001632 1.0e-19 100.9 238 36.6
Oeu061220.1 Olea europaea HOM05D001749 ORTHO05D001632 8.8e-19 97.8 219 41.6
Dinv23498 Davidia involucrata HOM05D001749 ORTHO05D001632 1.5e-18 97.1 202 43.1
PGSC0003DMG400000715 Solanum tuberosum HOM05D001749 ORTHO05D001632 1.7e-17 93.6 193 37.8
SalBow6G3784 Salvia bowleyana HOM05D001749 ORTHO05D001632 8.3e-17 91.3 214 36.4
Nitab4.5_0018301g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.4e-16 90.5 257 37.4
SGA_v2.0_scaffold58G20512 Striga asiatica HOM05D001749 ORTHO05D001632 1.8e-16 90.1 222 38.7
Sopen01g052020 Solanum pennellii HOM05D001749 ORTHO05D001632 3.1e-16 89.4 228 37.3
Lsat_1_v5_gn_9_108241 Lactuca sativa HOM05D001749 ORTHO05D001632 7.0e-16 88.2 236 37.3
DCAR_021933 Daucus carota HOM05D001749 ORTHO05D001632 1.2e-15 87.4 238 36.1
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 7.7e-15 84.7 213 37.1
Sopen01g051990 Solanum pennellii HOM05D001749 ORTHO05D001632 7.7e-15 84.7 218 33.5
Peaxi162Scf00684g00210 Petunia axillaris HOM05D001749 ORTHO05D001632 1.3e-14 84.0 258 32.9
CAN.G1058.9 Capsicum annuum HOM05D001749 ORTHO05D001632 2.2e-14 83.2 254 35.8
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 3.8e-14 82.4 225 33.8
Migut.B00219 Erythranthe guttata HOM05D001749 ORTHO05D001632 3.8e-14 82.4 227 34.8
Nitab4.5_0000308g0310 Nicotiana tabacum HOM05D001749 ORTHO05D001632 3.8e-14 82.4 264 36.4
DCAR_022986 Daucus carota HOM05D001749 ORTHO05D001632 6.5e-14 81.6 234 35.0
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 1.9e-13 80.1 222 34.7
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 2.5e-13 79.7 221 34.8
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 3.2e-13 79.3 227 34.4
Nitab4.5_0009921g0040 Nicotiana tabacum HOM05D001749 ORTHO05D001632 5.5e-13 78.6 81 59.3
SalBow3G2565 Salvia bowleyana HOM05D001749 ORTHO05D001632 7.2e-13 78.2 170 37.6
Migut.N01252 Erythranthe guttata HOM05D001749 ORTHO05D001632 9.4e-13 77.8 226 34.5
PGSC0003DMG400000717 Solanum tuberosum HOM05D001749 ORTHO05D001632 9.4e-13 77.8 257 33.9
Peaxi162Scf00016g00515 Petunia axillaris HOM05D001749 ORTHO05D001632 1.4e-11 73.9 247 33.6
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.8e-11 73.6 216 33.8
Rhsim05G0072700 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-11 73.2 229 34.5
Cc02_g17320 Coffea canephora HOM05D001749 ORTHO05D001632 4.0e-11 72.4 246 32.5
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 5.2e-11 72.0 231 33.8
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 6.8e-11 71.6 231 33.8
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 6.8e-11 71.6 230 34.3
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 8.8e-11 71.2 231 33.8
DCAR_003661 Daucus carota HOM05D001749 ORTHO05D001632 1.2e-10 70.9 241 30.7
Solyc01g109800.2 Solanum lycopersicum HOM05D001749 ORTHO05D001632 2.0e-10 70.1 94 53.2
Sopen01g052010 Solanum pennellii HOM05D001749 ORTHO05D001632 2.0e-10 70.1 249 33.3
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 2.6e-10 69.7 229 31.9
Actinidia27886 Actinidia chinensis HOM05D001749 ORTHO05D001632 4.4e-10 68.9 142 42.3
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 4.4e-10 68.9 220 28.6
Gohir.A03G196000 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.4e-10 68.9 215 32.6
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.4e-10 68.9 230 32.6
Oeu029154.2 Olea europaea HOM05D001749 ORTHO05D001632 7.5e-10 68.2 229 34.5
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 9.8e-10 67.8 225 32.4
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 3.7e-09 65.9 233 30.9
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 4.9e-09 65.5 231 32.5
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 4.9e-09 65.5 222 34.7
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 8.3e-09 64.7 224 32.6
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 8.3e-09 64.7 244 29.5
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 8.3e-09 64.7 228 31.1
Gorai.005G245100 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.4e-08 63.9 215 32.1
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 1.4e-08 63.9 227 33.5
Rhsim11G0179200 Rhododendron simsii HOM05D001749 ORTHO05D001632 1.8e-08 63.5 213 33.3
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 2.4e-08 63.2 206 29.1
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 3.1e-08 62.8 227 30.0
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 4.1e-08 62.4 228 31.1
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 5.4e-08 62.0 206 29.1
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 5.4e-08 62.0 218 34.9
AUR62016762 Chenopodium quinoa HOM05D006463 ORTHO05D002997 7.0e-08 61.6 164 36.6
GSVIVG01018920001 Vitis vinifera HOM05D001749 ORTHO05D001632 7.0e-08 61.6 202 32.7
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 9.1e-08 61.2 215 30.2
Hma1.2p1_2496F.1_g323290 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 9.1e-08 61.2 81 54.3
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 1.2e-07 60.8 230 32.6
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 1.6e-07 60.5 202 32.2
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.6e-07 60.5 224 29.0
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.6e-07 60.5 224 28.1
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 1.6e-07 60.5 245 29.0
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 1.6e-07 60.5 218 32.6
Duzib052G0040 Durio zibethinus HOM05D001749 ORTHO05D001632 2.0e-07 60.1 237 27.8
ECA236G4502 Erigeron canadensis HOM05D001749 ORTHO05D001632 2.7e-07 59.7 215 33.0
Glyma.11G115300 Glycine max HOM05D001749 ORTHO05D001632 2.7e-07 59.7 217 31.8
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 3.5e-07 59.3 234 31.6
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 3.5e-07 59.3 234 31.6
MSTRG.27689 Avicennia marina HOM05D001749 ORTHO05D001632 4.5e-07 58.9 220 33.6
Gohir.D02G217101 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.5e-07 58.9 215 30.7
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 5.9e-07 58.5 213 29.6
AUR62011296 Chenopodium quinoa HOM05D001749 ORTHO05D001632 5.9e-07 58.5 160 35.6
Gohir.A13G033300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.9e-07 58.5 223 28.7
Sed0016213 Sechium edule HOM05D001749 ORTHO05D001632 5.9e-07 58.5 262 29.0
Actinidia00539 Actinidia chinensis HOM05D001749 ORTHO05D001632 7.7e-07 58.2 210 35.2
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 7.7e-07 58.2 228 30.7
Sopen01g052000 Solanum pennellii HOM05D001749 ORTHO05D001632 7.7e-07 58.2 187 34.8
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 7.7e-07 58.2 229 30.1
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.3e-06 57.4 221 29.0
CiPaw.05G066900 Carya illinoinensis HOM05D001749 ORTHO05D001632 2.3e-06 56.6 225 29.3
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 2.3e-06 56.6 198 33.8
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 2.9e-06 56.2 212 32.5
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 2.9e-06 56.2 241 33.6
DCAR_028973 Daucus carota HOM05D001749 ORTHO05D001632 3.8e-06 55.8 222 33.3
HanXRQChr16g0505471 Helianthus annuus HOM05D001749 ORTHO05D001632 3.8e-06 55.8 276 26.1
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 3.8e-06 55.8 240 31.7
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 5.0e-06 55.5 228 29.8
Lsat_1_v5_gn_7_90501 Lactuca sativa HOM05D001749 ORTHO05D001632 6.6e-06 55.1 195 31.8


User provided reference genes

Program Settings