Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 9.2e-130 466.8 228 100.0
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 2.1e-105 386.0 231 85.3
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.2e-97 360.1 213 85.4
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 7.4e-71 271.2 146 92.5
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 3.1e-53 212.6 229 47.6
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 5.9e-52 208.4 230 47.4
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 8.0e-49 198.0 229 47.2
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 5.2e-48 195.3 148 70.9
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 2.4e-45 186.4 273 40.3
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 2.7e-44 183.0 230 46.5
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 3.5e-44 182.6 237 46.8
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 3.5e-44 182.6 237 46.8
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.4e-40 170.6 232 43.1
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 2.0e-39 166.8 83 90.4
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 2.0e-39 166.8 81 93.8
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 3.4e-39 166.0 232 45.3
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 3.4e-39 166.0 87 89.7
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 4.4e-39 165.6 252 41.3
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 1.7e-38 163.7 230 42.6
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.4e-37 160.6 230 42.6
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 1.8e-37 160.2 228 43.9
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 5.4e-37 158.7 230 43.9
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 7.0e-37 158.3 230 40.9
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 3.5e-36 156.0 239 42.7
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 7.2e-34 148.3 239 43.5
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 1.2e-33 147.5 223 42.6
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 2.8e-33 146.4 276 37.3
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 3.6e-33 146.0 231 41.6
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 8.9e-32 141.4 238 39.9
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 3.4e-31 139.4 249 40.2
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 1.3e-30 137.5 233 39.9
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 3.7e-30 136.0 250 37.2
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 6.3e-30 135.2 235 37.0
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 6.3e-30 135.2 238 37.4
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 8.3e-30 134.8 283 36.4
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 8.3e-30 134.8 234 41.0
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 3.2e-29 132.9 233 37.8
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 4.1e-29 132.5 245 38.4
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 7.0e-29 131.7 225 37.3
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 1.2e-28 131.0 234 39.7
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 2.7e-28 129.8 235 40.0
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 4.6e-28 129.0 235 38.3
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 1.7e-27 127.1 239 39.7
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 6.6e-27 125.2 232 36.6
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 1.1e-26 124.4 231 37.7
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.5e-26 124.0 228 34.6
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 1.9e-26 123.6 165 40.6
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 1.9e-26 123.6 232 36.6
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 2.5e-26 123.2 232 37.1
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 2.5e-26 123.2 261 37.5
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 3.3e-26 122.9 232 38.8
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 9.5e-26 121.3 229 35.4
CAN.G1910.1 Capsicum annuum HOM05D007349 ORTHO05D009317 1.6e-25 120.6 136 54.4
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 1.6e-25 120.6 226 38.5
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 2.8e-25 119.8 233 37.3
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 3.6e-25 119.4 228 37.3
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 4.7e-25 119.0 239 37.2
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 1.8e-24 117.1 232 34.5
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 3.1e-24 116.3 120 50.8
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 4.0e-24 115.9 236 40.3
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 1.2e-23 114.4 226 36.3
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 1.3e-22 110.9 231 34.6
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 1.3e-22 110.9 246 32.1
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 1.7e-22 110.5 231 33.3
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.2e-22 110.2 141 44.0
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 4.9e-22 109.0 200 34.0
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 4.9e-22 109.0 231 32.9
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 2.4e-21 106.7 72 63.9
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 5.4e-21 105.5 132 46.2
CAN.G1910.2 Capsicum annuum HOM05D007349 ORTHO05D009317 5.4e-21 105.5 63 77.8
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 9.2e-21 104.8 233 34.8
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 2.7e-20 103.2 275 33.8
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 6.0e-20 102.1 229 34.5
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 7.8e-20 101.7 210 34.3
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 1.3e-19 100.9 264 33.0
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 3.9e-19 99.4 235 33.6
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 6.6e-19 98.6 266 32.0
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 8.6e-19 98.2 251 33.1
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 1.9e-18 97.1 267 34.1
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 2.5e-18 96.7 271 32.8
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.3e-18 96.3 167 37.7
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 5.6e-18 95.5 145 43.4
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 5.6e-18 95.5 264 31.4
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 9.5e-18 94.7 282 30.5
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 1.6e-17 94.0 265 32.1
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 2.8e-17 93.2 265 31.7
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 6.2e-17 92.0 275 29.8
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 1.8e-16 90.5 145 35.2
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 4.0e-16 89.4 270 32.6
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 4.0e-16 89.4 271 31.0
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 4.0e-16 89.4 86 53.5
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 5.2e-16 89.0 265 31.3
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 3.4e-15 86.3 274 31.4
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.3e-14 84.3 41 82.9
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 3.7e-14 82.8 206 29.6
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 2.7e-12 76.6 46 69.6
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 3.3e-10 69.7 250 28.8
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 8.9e-08 61.6 85 38.8
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 1.2e-07 61.2 70 42.9
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 2.6e-07 60.1 115 31.3


User provided reference genes

Program Settings