Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016750 Solanum tuberosum HOM05D000045 ORTHO05D000067 2.8e-31 137.9 65 100.0
Sopen06g025470 Solanum pennellii HOM05D000045 ORTHO05D000067 1.6e-23 112.1 59 88.1
Solyc06g068200.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.1e-23 111.7 59 86.4
Nitab4.5_0009670g0030 Nicotiana tabacum HOM05D000045 ORTHO05D000067 1.1e-22 109.4 60 85.0
Nitab4.5_0000373g0120 Nicotiana tabacum HOM05D000045 ORTHO05D000067 7.6e-21 103.2 60 83.3
Lj5C74T20 Lonicera japonica HOM05D000045 ORTHO05D000067 3.9e-17 90.9 60 66.7
CSS0025852 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-16 88.2 60 61.7
Dinv30621 Davidia involucrata HOM05D000045 ORTHO05D000067 3.3e-16 87.8 60 61.7
QL05p030203 Quercus lobata HOM05D000045 ORTHO05D000067 1.6e-15 85.5 60 60.0
Migut.I00751 Erythranthe guttata HOM05D000045 ORTHO05D000067 3.7e-15 84.3 61 65.6
Thecc.06G030700 Theobroma cacao HOM05D000045 ORTHO05D000067 8.2e-15 83.2 60 60.0
Cpa.g.sc167.13 Carica papaya HOM05D000045 ORTHO05D000067 1.1e-14 82.8 59 55.9
Manes.04G111200 Manihot esculenta HOM05D000045 ORTHO05D000067 1.1e-14 82.8 60 58.3
Actinidia01733 Actinidia chinensis HOM05D000045 ORTHO05D000067 1.4e-14 82.4 60 58.3
Haze_16579 Corylus avellana HOM05D000045 ORTHO05D000067 1.4e-14 82.4 60 58.3
Hma1.2p1_0242F.1_g100750 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 1.8e-14 82.0 60 60.0
Duzib235G1514 Durio zibethinus HOM05D000045 ORTHO05D000067 6.9e-14 80.1 60 58.3
Prupe.3G090300 Prunus persica HOM05D000045 ORTHO05D000067 9.0e-14 79.7 60 55.0
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.0e-14 79.7 60 55.0
COL.COLO4_11905 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.0e-13 78.6 60 56.7
vmacro19012 Vaccinium macrocarpon HOM05D000045 ORTHO05D000067 2.6e-13 78.2 60 55.0
Eucgr.J03076 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.4e-13 77.8 60 60.0
FvH4_6g29432 Fragaria vesca HOM05D000045 ORTHO05D000067 4.5e-13 77.4 60 53.3
FAN02G0412 Fragaria x ananassa HOM05D000045 ORTHO05D000067 4.5e-13 77.4 60 53.3
Gohir.A05G122400 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.5e-13 77.4 62 56.5
MD17G1214400 Malus domestica HOM05D000045 ORTHO05D000067 4.5e-13 77.4 60 53.3
Ciclev10025157m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.0e-12 76.3 60 56.7
ClCG07G012230 Citrullus lanatus HOM05D000045 ORTHO05D000067 1.3e-12 75.9 60 55.0
CsaV3_4G001930 Cucumis sativus L. HOM05D000045 ORTHO05D000067 1.3e-12 75.9 60 55.0
Gohir.D05G123300 Gossypium hirsutum HOM05D000045 ORTHO05D000067 1.3e-12 75.9 62 54.8
Gorai.009G127000 Gossypium raimondii HOM05D000045 ORTHO05D000067 1.3e-12 75.9 62 54.8
RcHm_v2.0_Chr2g0134921 Rosa chinensis HOM05D000045 ORTHO05D000067 2.9e-12 74.7 60 50.0
Atru.chr3.3831 Acer truncatum HOM05D000045 ORTHO05D000067 5.0e-12 73.9 60 55.0
MELO3C032857.2 Cucumis melo HOM05D000045 ORTHO05D000067 1.1e-11 72.8 60 51.7
CANSAT56G3827 Cannabis sativa HOM05D000045 ORTHO05D000067 1.4e-11 72.4 60 50.0
Sabra01G0159200 Salix brachista HOM05D000045 ORTHO05D000067 7.2e-11 70.1 60 51.7
MSTRG.22755 Avicennia marina HOM05D000045 ORTHO05D000067 1.2e-10 69.3 49 59.2
Potri.001G201600 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.2e-10 69.3 48 62.5
Sed0011879 Sechium edule HOM05D000045 ORTHO05D000067 6.1e-10 67.0 60 48.3
Prupe.2G072300 Prunus persica HOM05D000045 ORTHO05D000067 3.0e-09 64.7 60 48.3
SGA_v2.0_scaffold5G02711 Striga asiatica HOM05D000045 ORTHO05D000067 1.1e-08 62.8 39 69.2
Dinv05001 Davidia involucrata HOM05D000045 ORTHO05D000067 4.1e-06 54.3 63 38.1
Nn8g39558 Nelumbo nucifera HOM05D000045 ORTHO05D000067 9.0e-06 53.1 63 42.9


User provided reference genes

Program Settings