Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016481 Solanum tuberosum HOM05D000513 ORTHO05D005786 4.6e-27 123.6 55 100.0
CAN.G569.6 Capsicum annuum HOM05D000513 ORTHO05D005786 7.6e-22 106.3 49 93.9
Solyc02g080570.3 Solanum lycopersicum HOM05D000513 ORTHO05D005786 4.9e-21 103.6 44 100.0
Sopen02g025270 Solanum pennellii HOM05D000513 ORTHO05D005786 4.9e-21 103.6 44 100.0
VMungo0540G1206 Vigna mungo HOM05D000513 ORTHO05D005786 1.4e-20 102.1 46 91.3
Lj1C1231T2 Lonicera japonica HOM05D000513 ORTHO05D005786 2.5e-20 101.3 46 91.3
Lj6g0028016 Lotus japonicus HOM05D000513 ORTHO05D005786 2.5e-20 101.3 44 95.5
Glyma.13G204700 Glycine max HOM05D000513 ORTHO05D005786 4.2e-20 100.5 46 91.3
Glyma.15G108000 Glycine max HOM05D000513 ORTHO05D005786 4.2e-20 100.5 46 91.3
Medtr2g023320 Medicago truncatula HOM05D000513 ORTHO05D005786 4.2e-20 100.5 46 91.3
TPR.G9945 Trifolium pratense HOM05D000513 ORTHO05D005786 4.2e-20 100.5 46 91.3
GSVIVG01004632001 Vitis vinifera HOM05D000513 ORTHO05D049394 4.2e-20 100.5 43 95.3
Psat1g180640 Pisum sativum HOM05D000513 ORTHO05D005786 5.5e-20 100.1 46 91.3
PSO675G1484 Papaver somniferum HOM05D000513 ORTHO05D005786 7.1e-20 99.8 43 95.3
Eucgr.D01324 Eucalyptus grandis HOM05D000513 ORTHO05D005786 1.2e-19 99.0 44 93.2
PSO541G4629 Papaver somniferum HOM05D000513 ORTHO05D005786 1.2e-19 99.0 43 95.3
GSVIVG01012723001 Vitis vinifera HOM05D000513 ORTHO05D005786 1.2e-19 99.0 43 93.0
Aqoxy1G02137 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 1.6e-19 98.6 44 90.9
CSS0023626 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005786 1.6e-19 98.6 43 93.0
DCAR_008154 Daucus carota HOM05D000513 ORTHO05D005786 1.6e-19 98.6 44 93.2
FAN21G2967 Fragaria x ananassa HOM05D000513 ORTHO05D005786 2.1e-19 98.2 43 93.0
Lalb_Chr15g0087621 Lupinus albus HOM05D000513 ORTHO05D005786 2.1e-19 98.2 43 93.0
RcHm_v2.0_Chr5g0002941 Rosa chinensis HOM05D000513 ORTHO05D005786 2.1e-19 98.2 43 93.0
Gohir.A05G170400 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.7e-19 97.8 43 90.7
Gohir.D05G173500 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.7e-19 97.8 43 90.7
Gorai.009G178700 Gossypium raimondii HOM05D000513 ORTHO05D005786 2.7e-19 97.8 43 90.7
Ca_00662_v3 Cicer arietinum L. HOM05D000513 ORTHO05D005786 3.5e-19 97.4 46 89.1
ECA248G2927 Erigeron canadensis HOM05D000513 ORTHO05D005786 3.5e-19 97.4 43 93.0
Prupe.4G020100 Prunus persica HOM05D000513 ORTHO05D005786 4.6e-19 97.1 43 90.7
PGR004G0078 Punica granatum HOM05D000513 ORTHO05D005786 4.6e-19 97.1 43 90.7
SGA_v2.0_scaffold4G01913 Striga asiatica HOM05D000513 ORTHO05D005786 4.6e-19 97.1 43 90.7
MSTRG.7208 Avicennia marina HOM05D000513 ORTHO05D005786 6.0e-19 96.7 43 93.0
Cpa.g.sc152.17 Carica papaya HOM05D000513 ORTHO05D005786 6.0e-19 96.7 43 90.7
CiPaw.10G071400 Carya illinoinensis HOM05D000513 ORTHO05D005786 6.0e-19 96.7 43 90.7
Potri.004G014100 Populus trichocarpa HOM05D000513 ORTHO05D005786 6.0e-19 96.7 43 88.4
Actinidia05513 Actinidia chinensis HOM05D000513 ORTHO05D005786 7.9e-19 96.3 43 88.4
Cfa000217 Carpinus fangiana HOM05D000513 ORTHO05D005786 7.9e-19 96.3 43 90.7
Cc09_g01640 Coffea canephora HOM05D000513 ORTHO05D005786 7.9e-19 96.3 43 93.0
Actinidia26911 Actinidia chinensis HOM05D000513 ORTHO05D005786 1.0e-18 95.9 43 88.4
Haze_06803 Corylus avellana HOM05D000513 ORTHO05D005786 1.0e-18 95.9 43 88.4
DCAR_027732 Daucus carota HOM05D000513 ORTHO05D005786 1.0e-18 95.9 44 90.9
Sabra04G0007000 Salix brachista HOM05D000513 ORTHO05D005786 1.0e-18 95.9 43 88.4
FAN25G0071 Fragaria x ananassa HOM05D000513 ORTHO05D005786 1.3e-18 95.5 43 90.7
Hma1.2p1_0749F.1_g212600 Hydrangea macrophylla HOM05D000513 ORTHO05D005786 1.3e-18 95.5 43 88.4
TAR627G1077 Trochodendron aralioides HOM05D000513 ORTHO05D005786 1.3e-18 95.5 43 88.4
COL.COLO4_31779 Corchorus olitorius HOM05D000513 ORTHO05D005786 1.8e-18 95.1 43 88.4
Migut.M01321 Erythranthe guttata HOM05D000513 ORTHO05D005786 1.8e-18 95.1 43 88.4
FvH4_3g02040 Fragaria vesca HOM05D000513 ORTHO05D005786 1.8e-18 95.1 43 88.4
AL1G22860 Arabidopsis lyrata HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 88.4
AT1G11720 Arabidopsis thaliana HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 88.4
arahy.Tifrunner.gnm1.ann1.J4P8M7 Arachis hypogaea HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 93.0
Carub.0001s1136 Capsella rubella HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 88.4
CARHR012030 Cardamine hirsuta HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 88.4
Thhalv10006631m.g Eutrema salsugineum HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 88.4
MD05G1347400 Malus domestica HOM05D000513 ORTHO05D005786 2.3e-18 94.7 43 86.0
Duzib235G0182 Durio zibethinus HOM05D000513 ORTHO05D005786 3.0e-18 94.4 43 88.4
Lsat_1_v5_gn_1_128760 Lactuca sativa HOM05D002121 ORTHO05D005786 3.0e-18 94.4 46 82.6
BcaC05g25041 Brassica carinata HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
A06p08280 Brassica napus HOM05D000316 ORTHO05D005786 3.9e-18 94.0 43 86.0
A08p33270 Brassica napus HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
C08p14920 Brassica napus HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
BolC5t29724H Brassica oleracea HOM05D000316 ORTHO05D005786 3.9e-18 94.0 43 86.0
BolC8t49121H Brassica oleracea HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
BraA06t24027Z Brassica rapa HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
BraA08t35246Z Brassica rapa HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
Sp1g10330 Schrenkiella parvula HOM05D000513 ORTHO05D005786 3.9e-18 94.0 43 86.0
HanXRQChr01g0004221 Helianthus annuus HOM05D000513 ORTHO05D005786 5.1e-18 93.6 43 88.4
Rhsim13G0153900 Rhododendron simsii HOM05D000513 ORTHO05D005786 5.1e-18 93.6 43 86.0
Oeu051893.1 Olea europaea HOM05D000513 ORTHO05D005786 6.7e-18 93.2 43 88.4
Phvul.006G149680 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 6.7e-18 93.2 46 82.6
C05p09830 Brassica napus HOM05D000316 ORTHO05D005786 8.7e-18 92.8 43 83.7
QL05p073090 Quercus lobata HOM05D000513 ORTHO05D005786 8.7e-18 92.8 43 88.4
Sed0027566 Sechium edule HOM05D000513 ORTHO05D005786 8.7e-18 92.8 43 88.4
vmacro03685 Vaccinium macrocarpon HOM05D000513 ORTHO05D005786 8.7e-18 92.8 43 86.0
arahy.Tifrunner.gnm1.ann1.4XJ09G Arachis hypogaea HOM05D000513 ORTHO05D005786 1.1e-17 92.4 44 86.4
MD10G1321800 Malus domestica HOM05D000513 ORTHO05D005786 1.1e-17 92.4 43 86.0
Nn1g07138 Nelumbo nucifera HOM05D000513 ORTHO05D005786 1.1e-17 92.4 43 88.4
Oeu051208.1 Olea europaea HOM05D000513 ORTHO05D005786 1.1e-17 92.4 43 86.0
Thecc.06G220800 Theobroma cacao HOM05D000513 ORTHO05D005786 1.5e-17 92.0 43 86.0
THA.LOC104809504 Tarenaya hassleriana HOM05D000513 ORTHO05D005786 1.9e-17 91.7 43 83.7
Aa31LG1G3050 Aethionema arabicum HOM05D000513 ORTHO05D005786 2.5e-17 91.3 43 83.7
Glyma.07G260500 Glycine max HOM05D000513 ORTHO05D005786 2.5e-17 91.3 43 86.0
arahy.Tifrunner.gnm1.ann1.A9I5GT Arachis hypogaea HOM05D000513 ORTHO05D005786 3.3e-17 90.9 44 86.4
MELO3C002455.2 Cucumis melo HOM05D000513 ORTHO05D005786 3.3e-17 90.9 43 86.0
CsaV3_1G010740 Cucumis sativus L. HOM05D000513 ORTHO05D005786 3.3e-17 90.9 43 86.0
Manes.16G006900 Manihot esculenta HOM05D000513 ORTHO05D005786 4.3e-17 90.5 43 83.7
TWI63G0257 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 5.7e-17 90.1 43 81.4
Os04g0624600 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 7.4e-17 89.7 43 79.1
ClCG03G004710 Citrullus lanatus HOM05D000513 ORTHO05D005786 1.3e-16 89.0 42 85.7
Hund23468 Selenicereus undatus HOM05D000513 ORTHO05D005786 1.3e-16 89.0 43 83.7
Zm00001eb070230 Zea mays HOM05D000513 ORTHO05D005786 1.3e-16 89.0 43 81.4
TAR629G0438 Trochodendron aralioides HOM05D000513 ORTHO05D005786 1.6e-16 88.6 41 85.4
VMungo1215G0539 Vigna mungo HOM05D000513 ORTHO05D005786 1.6e-16 88.6 43 83.7
Gohir.A10G012640 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.1e-16 88.2 43 79.1
Manes.17G038964 Manihot esculenta HOM05D000513 ORTHO05D005786 2.1e-16 88.2 43 79.1
Sed0006328 Sechium edule HOM05D000513 ORTHO05D005786 2.1e-16 88.2 43 81.4
SMO239G0166 Selaginella moellendorffii HOM05D000513 ORTHO05D005786 2.1e-16 88.2 43 81.4
Ciclev10014319m.g Citrus clementina HOM05D000513 ORTHO05D005786 2.8e-16 87.8 43 83.7
Gohir.D10G012300 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.8e-16 87.8 43 79.1
Gorai.011G013800 Gossypium raimondii HOM05D000513 ORTHO05D005786 2.8e-16 87.8 43 79.1
Phvul.003G078800 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 4.8e-16 87.0 42 83.3
SalBow8G1130 Salvia bowleyana HOM05D000513 ORTHO05D005786 4.8e-16 87.0 43 81.4
Atru.chr10.2232 Acer truncatum HOM05D000513 ORTHO05D005786 6.2e-16 86.7 43 83.7
Ah.14g088010 Amaranthus hybridus HOM05D000513 ORTHO05D005786 6.2e-16 86.7 43 79.1
AUR62012712 Chenopodium quinoa HOM05D000513 ORTHO05D005786 6.2e-16 86.7 43 79.1
unitig_748.g7967 Utricularia gibba HOM05D000513 ORTHO05D005786 8.2e-16 86.3 43 81.4
HPP92_011147 Vanilla planifolia HOM05D000513 ORTHO05D005786 8.2e-16 86.3 43 79.1
Zm00001eb413290 Zea mays HOM05D000513 ORTHO05D005786 1.1e-15 85.9 44 77.3
Mapoly0055s0049 Marchantia polymorpha HOM05D000513 ORTHO05D005786 1.4e-15 85.5 43 74.4
CDE05G0345 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 2.4e-15 84.7 43 79.1
CDE05G3649 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 2.4e-15 84.7 43 79.1
Os08g0191433 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 2.4e-15 84.7 43 74.4
AUR62021943 Chenopodium quinoa HOM05D000513 ORTHO05D005786 5.3e-15 83.6 43 76.7
AUR62044272 Chenopodium quinoa HOM05D000513 ORTHO05D005786 5.3e-15 83.6 43 76.7
EL10Ac8g20060 Beta vulgaris HOM05D000513 ORTHO05D005786 6.9e-15 83.2 43 74.4
CBR_g950 Chara braunii HOM05D000513 ORTHO05D005786 6.9e-15 83.2 44 77.3
Lalb_Chr12g0196081 Lupinus albus HOM05D000513 ORTHO05D005786 2.0e-14 81.6 43 79.1
AagrBONN_evm.TU.Sc2ySwM_344.2070 Anthoceros agrestis HOM05D000513 ORTHO05D005786 1.3e-13 79.0 43 69.8
Lj4g0014019 Lotus japonicus HOM05D000513 ORTHO05D005786 1.1e-12 75.9 43 81.4
Sc17g0007400 Simmondsia chinensis HOM05D000513 ORTHO05D005786 2.5e-12 74.7 43 69.8
Cre06.g282000 Chlamydomonas reinhardtii HOM05D000513 ORTHO05D005786 5.5e-12 73.6 43 65.1
MCO16G430 Micromonas commoda HOM05D000513 ORTHO05D005786 2.5e-09 64.7 41 58.5
Cre13.g579598 Chlamydomonas reinhardtii HOM05D000513 ORTHO05D005786 1.6e-08 62.0 43 60.5
PRCOL_00000831 Prasinoderma coloniale HOM05D000513 ORTHO05D005786 1.6e-08 62.0 43 55.8
MCO08G155 Micromonas commoda HOM05D000513 ORTHO05D005786 1.1e-07 59.3 43 58.1
Peaxi162Scf01102g00005 Petunia axillaris HOM05D000513 ORTHO05D005786 5.3e-07 57.0 36 72.2


User provided reference genes

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