Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 6.0e-34 147.1 85 100.0
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 1.2e-29 132.9 85 92.9
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.9e-28 127.5 85 78.8
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 9.3e-27 123.2 85 75.3
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.9e-19 99.0 82 65.9
Solyc02g080600.1 Solanum lycopersicum HOM05D007037 ORTHO05D006691 2.5e-19 98.6 66 93.9
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.1e-18 95.5 82 63.4
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 6.7e-17 90.5 82 72.0
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.2e-15 85.5 82 56.1
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 6.3e-15 84.0 82 53.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 6.3e-15 84.0 81 55.6
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 8.2e-15 83.6 82 54.9
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.8e-14 82.4 82 51.2
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 9.0e-14 80.1 84 51.2
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.6e-13 78.6 82 56.1
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.6e-13 78.6 82 56.1
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 7.7e-13 77.0 84 50.0
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.7e-12 75.9 81 48.1
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 2.2e-12 75.5 81 49.4
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 3.8e-12 74.7 83 53.0
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 3.8e-12 74.7 82 46.3
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 5.0e-12 74.3 79 48.1
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 5.0e-12 74.3 79 48.1
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 5.0e-12 74.3 79 50.6
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 5.0e-12 74.3 80 48.8
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 6.5e-12 73.9 82 51.2
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 8.5e-12 73.6 82 45.1
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 8.5e-12 73.6 81 50.6
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.1e-11 73.2 82 45.1
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 1.4e-11 72.8 82 50.0
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.4e-11 72.8 79 50.6
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.9e-11 72.4 82 47.6
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 4.2e-11 71.2 81 49.4
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 5.5e-11 70.9 70 58.6
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 7.2e-11 70.5 84 46.4
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 9.4e-11 70.1 82 48.8
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.6e-10 69.3 82 43.9
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.6e-10 69.3 82 45.1
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 2.1e-10 68.9 82 47.6
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 2.1e-10 68.9 84 46.4
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.7e-10 68.6 82 45.1
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 2.7e-10 68.6 81 46.9
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 7.9e-10 67.0 80 47.5
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 7.9e-10 67.0 82 46.3
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 3.0e-09 65.1 83 42.2
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 3.9e-09 64.7 82 42.7
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 6.7e-09 63.9 85 47.1
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 6.7e-09 63.9 85 43.5
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 8.8e-09 63.5 82 52.4
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 8.8e-09 63.5 80 42.5
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 2.5e-08 62.0 82 45.1
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 9.7e-08 60.1 77 42.9
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 3.7e-07 58.2 80 41.2
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 8.2e-07 57.0 79 39.2
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 8.2e-07 57.0 80 41.2
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 1.1e-06 56.6 82 41.5
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.8e-06 55.8 86 37.2
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 4.1e-06 54.7 82 40.2
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 6.9e-06 53.9 83 39.8
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 6.9e-06 53.9 82 42.7
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 6.9e-06 53.9 85 37.6
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 9.1e-06 53.5 82 37.8
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 9.1e-06 53.5 85 41.2


User provided reference genes

Program Settings