Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 2.2e-157 558.9 285 100.0
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 7.4e-145 517.3 270 97.4
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 6.3e-144 514.2 270 96.7
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 2.3e-138 495.7 270 93.0
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.6e-129 465.7 274 87.2
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 6.5e-125 451.1 270 86.7
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.5e-121 439.9 270 83.7
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 2.4e-103 379.4 271 71.6
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 5.6e-100 368.2 272 69.5
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 5.2e-98 361.7 271 68.6
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.4e-97 359.0 271 69.7
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.1e-95 354.0 271 68.3
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 4.1e-95 352.1 271 68.3
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 7.0e-95 351.3 278 66.9
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 9.2e-95 350.9 273 67.4
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 2.7e-94 349.4 287 66.2
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 5.0e-93 345.1 257 71.2
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 6.6e-93 344.7 262 67.9
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 8.6e-93 344.4 262 68.7
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.1e-92 344.0 262 67.2
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 7.3e-92 341.3 270 66.7
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 9.5e-92 340.9 271 66.4
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 8.1e-91 337.8 264 67.0
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.1e-90 337.4 271 66.4
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.1e-90 337.4 271 66.4
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.4e-90 337.0 271 66.4
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.8e-90 336.7 265 66.4
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 6.8e-90 334.7 263 66.2
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.6e-89 332.8 264 67.0
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 4.4e-89 332.0 277 65.0
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.4e-89 332.0 288 61.5
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 5.8e-89 331.6 253 69.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 5.8e-89 331.6 272 65.4
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.9e-89 330.9 279 64.9
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.9e-89 330.9 287 64.5
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.3e-88 330.5 258 69.4
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.3e-88 330.5 235 72.3
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 4.9e-88 328.6 273 63.7
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.3e-88 327.8 286 63.3
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.1e-87 327.4 274 63.9
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.1e-87 327.4 274 65.3
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.4e-87 326.2 270 65.9
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.4e-87 326.2 287 64.5
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 3.2e-87 325.9 270 63.0
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.2e-86 323.9 278 64.7
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.6e-86 323.6 271 63.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.6e-86 323.6 260 65.4
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.7e-86 322.8 280 61.8
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 2.7e-86 322.8 273 63.4
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 6.0e-86 321.6 275 62.9
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.3e-85 320.5 276 65.6
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.3e-85 320.5 276 65.6
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 2.3e-85 319.7 267 64.8
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.0e-85 319.3 240 70.4
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 3.9e-85 318.9 269 64.3
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 3.9e-85 318.9 218 72.9
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 5.1e-85 318.5 296 57.4
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 5.1e-85 318.5 256 66.8
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.1e-84 317.4 263 65.4
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.1e-84 317.4 189 81.0
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.1e-84 317.4 276 62.0
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.5e-84 317.0 275 63.3
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 3.3e-84 315.8 262 63.0
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 7.3e-84 314.7 262 64.5
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 3.6e-83 312.4 180 84.4
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 6.2e-83 311.6 272 62.5
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.1e-82 310.8 285 61.8
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.4e-82 310.5 192 78.6
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.4e-82 310.5 250 66.4
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 4.0e-82 308.9 275 62.2
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 5.2e-82 308.5 270 59.3
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 5.2e-82 308.5 277 60.6
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.5e-81 307.0 280 61.4
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 9.9e-81 304.3 178 84.3
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.3e-80 303.9 273 61.9
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 2.2e-80 303.1 222 68.0
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.2e-79 299.3 192 76.0
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 3.2e-79 299.3 217 70.5
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.6e-78 297.0 202 71.8
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 6.0e-78 295.0 192 75.0
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 3.0e-77 292.7 182 76.4
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 8.7e-77 291.2 191 74.9
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 2.5e-76 289.7 191 75.4
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 3.3e-76 289.3 192 74.0
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 7.3e-76 288.1 191 74.3
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 7.3e-76 288.1 191 74.3
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 7.3e-76 288.1 191 74.3
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.6e-75 287.0 191 73.8
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 2.8e-75 286.2 227 67.0
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.1e-75 284.6 213 69.5
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.1e-74 284.3 263 57.8
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 2.0e-73 280.0 221 65.2
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 4.2e-71 272.3 183 74.3
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 4.2e-71 272.3 183 74.3
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 2.1e-70 270.0 240 59.2
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 3.9e-69 265.8 190 67.9
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.9e-68 263.5 271 55.7
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.9e-68 263.5 271 54.6
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 6.9e-66 255.0 159 77.4
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.4e-58 230.7 208 58.2
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 8.4e-56 221.5 209 53.6
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 4.5e-49 199.1 139 68.3
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 3.8e-48 196.1 190 53.2
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.1e-44 184.5 114 81.6
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.0e-40 171.4 98 82.7
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.0e-32 144.8 93 74.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.0e-28 130.6 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 4.1e-26 122.9 159 47.8
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 4.7e-22 109.4 86 61.6
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.2e-19 98.6 79 64.6
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.1e-14 84.0 186 30.1
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 1.0e-13 81.6 116 41.4
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 1.9e-07 60.8 168 29.8


User provided reference genes

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