Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016377 Solanum tuberosum HOM05D000364 ORTHO05D000235 1.3e-30 135.6 59 100.0
Sopen01g003430 Solanum pennellii HOM05D000364 ORTHO05D000235 2.4e-29 131.3 59 94.9
Solyc01g150101.1 Solanum lycopersicum HOM05D000364 ORTHO05D000235 2.6e-28 127.9 59 93.2
Oeu044055.1 Olea europaea HOM05D000364 ORTHO05D000235 2.3e-16 88.2 61 68.9
Os07g0471900 Oryza sativa ssp. japonica HOM05D000364 ORTHO05D000235 8.8e-16 86.3 65 63.1
Nn4g24808 Nelumbo nucifera HOM05D000364 ORTHO05D000235 5.7e-15 83.6 64 64.1
Oeu001132.1 Olea europaea HOM05D000364 ORTHO05D000235 7.4e-15 83.2 62 64.5
Thecc.02G295600 Theobroma cacao HOM05D000364 ORTHO05D000235 7.4e-15 83.2 65 64.6
DCAR_030325 Daucus carota HOM05D000364 ORTHO05D000235 1.3e-14 82.4 55 65.5
Duzib251G0837 Durio zibethinus HOM05D000364 ORTHO05D000235 1.3e-14 82.4 65 61.5
FvH4_4g36070 Fragaria vesca HOM05D000364 ORTHO05D000235 1.7e-14 82.0 65 58.5
CiPaw.05G164000 Carya illinoinensis HOM05D000364 ORTHO05D000235 2.2e-14 81.6 53 75.5
Gohir.A03G115700 Gossypium hirsutum HOM05D000364 ORTHO05D000235 2.2e-14 81.6 65 63.1
Rhsim09G0079600 Rhododendron simsii HOM05D000364 ORTHO05D000235 2.2e-14 81.6 74 56.8
Ciclev10005130m.g Citrus clementina HOM05D000364 ORTHO05D000235 2.8e-14 81.3 54 68.5
COL.COLO4_16623 Corchorus olitorius HOM05D000364 ORTHO05D000235 2.8e-14 81.3 65 61.5
DCAR_023525 Daucus carota HOM05D000364 ORTHO05D000235 2.8e-14 81.3 64 62.5
Aqoxy3G04177 Aquilegia oxysepala HOM05D000364 ORTHO05D000235 3.7e-14 80.9 64 62.5
Eucgr.B02624 Eucalyptus grandis HOM05D000364 ORTHO05D000235 3.7e-14 80.9 64 62.5
FAN12G4025 Fragaria x ananassa HOM05D000364 ORTHO05D000235 4.8e-14 80.5 65 56.9
TAR622G0965 Trochodendron aralioides HOM05D000364 ORTHO05D000235 4.8e-14 80.5 64 60.9
Cc11_g03260 Coffea canephora HOM05D000364 ORTHO05D000235 6.3e-14 80.1 64 60.9
Zm00001eb320070 Zea mays HOM05D000364 ORTHO05D000235 6.3e-14 80.1 65 58.5
Potri.010G098900 Populus trichocarpa HOM05D000364 ORTHO05D000235 8.2e-14 79.7 64 59.4
FAN07G1309 Fragaria x ananassa HOM05D000364 ORTHO05D000235 1.1e-13 79.3 65 56.9
GSVIVG01010280001 Vitis vinifera HOM05D000364 ORTHO05D000235 1.1e-13 79.3 54 66.7
Zm00001eb104830 Zea mays HOM05D000364 ORTHO05D000235 1.4e-13 79.0 53 64.2
FAN17G2716 Fragaria x ananassa HOM05D000364 ORTHO05D000235 1.8e-13 78.6 65 58.5
Gohir.D02G139500 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.8e-13 78.6 65 61.5
Gorai.005G157300 Gossypium raimondii HOM05D000364 ORTHO05D000235 1.8e-13 78.6 65 61.5
Manes.17G092400 Manihot esculenta HOM05D000364 ORTHO05D000235 1.8e-13 78.6 65 61.5
arahy.Tifrunner.gnm1.ann1.3QD5VY Arachis hypogaea HOM05D000364 ORTHO05D000235 2.4e-13 78.2 66 57.6
arahy.Tifrunner.gnm1.ann1.70FQSK Arachis hypogaea HOM05D000364 ORTHO05D000235 2.4e-13 78.2 66 57.6
Cpa.g.c26556.1 Carica papaya HOM05D000364 ORTHO05D000235 2.4e-13 78.2 64 60.9
Lj6A726G32 Lonicera japonica HOM05D000364 ORTHO05D000235 2.4e-13 78.2 54 66.7
Medtr1g094085 Medicago truncatula HOM05D000364 ORTHO05D000235 2.4e-13 78.2 64 59.4
Prupe.1G341300 Prunus persica HOM05D000364 ORTHO05D000235 2.4e-13 78.2 65 60.0
HPP92_008581 Vanilla planifolia HOM05D000364 ORTHO05D000235 2.4e-13 78.2 54 68.5
ClCG11G000750 Citrullus lanatus HOM05D000364 ORTHO05D000235 3.1e-13 77.8 65 63.1
FAN22G0918 Fragaria x ananassa HOM05D000364 ORTHO05D000235 3.1e-13 77.8 65 56.9
MELO3C022574.2 Cucumis melo HOM05D000364 ORTHO05D000235 4.1e-13 77.4 65 61.5
HanXRQChr16g0528191 Helianthus annuus HOM05D000364 ORTHO05D000235 4.1e-13 77.4 64 53.1
QL03p041263 Quercus lobata HOM05D000364 ORTHO05D000235 4.1e-13 77.4 64 64.1
VMungo0720G2462 Vigna mungo HOM05D000364 ORTHO05D000235 4.1e-13 77.4 59 59.3
Glyma.20G184300 Glycine max HOM05D000364 ORTHO05D000235 5.3e-13 77.0 64 57.8
TPR.G9823 Trifolium pratense HOM05D000364 ORTHO05D000235 5.3e-13 77.0 64 59.4
AL1G45450 Arabidopsis lyrata HOM05D000364 ORTHO05D000235 6.9e-13 76.6 67 58.2
CsaV3_5G012430 Cucumis sativus L. HOM05D000364 ORTHO05D000235 6.9e-13 76.6 65 61.5
MD16G1009300 Malus domestica HOM05D000364 ORTHO05D000235 6.9e-13 76.6 65 58.5
Manes.15G141700 Manihot esculenta HOM05D000364 ORTHO05D000235 6.9e-13 76.6 65 61.5
Phvul.007G100300 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 6.9e-13 76.6 64 57.8
Glyma.10G206300 Glycine max HOM05D000364 ORTHO05D000235 9.1e-13 76.3 65 56.9
Lj5g0015794 Lotus japonicus HOM05D000364 ORTHO05D000235 9.1e-13 76.3 53 67.9
Sed0015908 Sechium edule HOM05D000364 ORTHO05D000235 9.1e-13 76.3 65 61.5
Atru.chr11.1083 Acer truncatum HOM05D000364 ORTHO05D000235 1.2e-12 75.9 65 60.0
Carub.0001s2945 Capsella rubella HOM05D000364 ORTHO05D000235 1.5e-12 75.5 68 55.9
Thhalv10007669m.g Eutrema salsugineum HOM05D000364 ORTHO05D000235 1.5e-12 75.5 67 56.7
Ca_10533_v3 Cicer arietinum L. HOM05D000364 ORTHO05D000235 2.0e-12 75.1 52 63.5
RcHm_v2.0_Chr4g0445691 Rosa chinensis HOM05D000364 ORTHO05D000235 2.0e-12 75.1 65 56.9
Sp1g26900 Schrenkiella parvula HOM05D000364 ORTHO05D000235 2.0e-12 75.1 67 56.7
Duzib268G0885 Durio zibethinus HOM05D000364 ORTHO05D000235 2.6e-12 74.7 66 57.6
Lsat_1_v5_gn_4_21821 Lactuca sativa HOM05D000364 ORTHO05D000235 2.6e-12 74.7 64 56.2
TAR400G0002 Trochodendron aralioides HOM05D000364 ORTHO05D000235 2.6e-12 74.7 62 58.1
BcaB07g32766 Brassica carinata HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
BcaC05g27136 Brassica carinata HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
BcaC05g27138 Brassica carinata HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
A09p35160 Brassica napus HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
C05p30240 Brassica napus HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
BolC5t31765H Brassica oleracea HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
BraA09t39044Z Brassica rapa HOM05D000364 ORTHO05D000235 3.4e-12 74.3 67 55.2
CANSAT78G2017 Cannabis sativa HOM05D000364 ORTHO05D000235 3.4e-12 74.3 42 73.8
Lalb_Chr06g0170311 Lupinus albus HOM05D000364 ORTHO05D000235 3.4e-12 74.3 64 59.4
MD13G1012600 Malus domestica HOM05D000364 ORTHO05D000235 3.4e-12 74.3 65 56.9
PSO063G4870 Papaver somniferum HOM05D000364 ORTHO05D000235 4.5e-12 73.9 71 53.5
Haze_01586 Corylus avellana HOM05D000364 ORTHO05D000235 7.7e-12 73.2 55 69.1
Potri.008G142700 Populus trichocarpa HOM05D000364 ORTHO05D000235 7.7e-12 73.2 55 61.8
Sabra08G0108000 Salix brachista HOM05D000364 ORTHO05D000235 1.0e-11 72.8 61 57.4
THA.LOC104806574 Tarenaya hassleriana HOM05D000364 ORTHO05D000235 1.7e-11 72.0 57 59.6
vmacro10774 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 2.2e-11 71.6 58 60.3
CARHR030570 Cardamine hirsuta HOM05D000364 ORTHO05D000235 2.9e-11 71.2 67 55.2
Lalb_Chr02g0151931 Lupinus albus HOM05D000364 ORTHO05D000235 2.9e-11 71.2 43 74.4
PSO782G1279 Papaver somniferum HOM05D000364 ORTHO05D000235 2.9e-11 71.2 71 52.1
PGR004G0131 Punica granatum HOM05D000364 ORTHO05D000235 6.5e-11 70.1 62 56.5
Sabra10G0071400 Salix brachista HOM05D000364 ORTHO05D000235 1.9e-10 68.6 55 61.8
TWI74G0886 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 2.5e-10 68.2 58 56.9
Os02g0671300 Oryza sativa ssp. japonica HOM05D000364 ORTHO05D000235 4.7e-09 63.9 42 64.3
ECA234G3894 Erigeron canadensis HOM05D000364 ORTHO05D000235 1.8e-08 62.0 59 50.8
FAN09G2066 Fragaria x ananassa HOM05D000364 ORTHO05D000235 4.8e-06 53.9 38 57.9
FAN14G0524 Fragaria x ananassa HOM05D000364 ORTHO05D000235 4.8e-06 53.9 38 57.9
FAN05G3767 Fragaria x ananassa HOM05D000364 ORTHO05D000235 8.2e-06 53.1 38 57.9
RcHm_v2.0_Chr2g0139261 Rosa chinensis HOM05D000364 ORTHO05D000235 8.2e-06 53.1 38 57.9


User provided reference genes

Program Settings