Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 3.2e-108 395.2 213 100.0
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 4.8e-104 381.3 213 96.7
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 7.6e-102 374.0 213 94.8
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.1e-89 333.6 211 84.4
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 1.5e-89 333.2 213 82.2
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 1.1e-73 280.4 205 73.2
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.8e-66 256.5 211 66.4
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 5.7e-65 251.5 200 68.5
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 1.5e-62 243.4 211 63.5
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 2.0e-62 243.0 213 64.8
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.2e-61 239.6 210 61.9
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 6.5e-61 238.0 211 61.1
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 8.5e-61 237.7 211 61.1
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 5.5e-60 235.0 211 61.6
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 5.5e-60 235.0 211 61.6
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 1.0e-58 230.7 211 60.7
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 3.0e-58 229.2 209 61.2
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 3.3e-57 225.7 211 58.8
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.3e-57 225.7 211 57.8
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 4.4e-57 225.3 211 58.8
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 5.7e-57 224.9 215 56.7
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 5.7e-57 224.9 211 58.3
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 1.4e-55 220.3 210 58.1
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 3.1e-55 219.2 210 59.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 5.3e-55 218.4 212 58.0
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 1.2e-54 217.2 210 57.1
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 2.2e-53 213.0 209 57.9
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 2.9e-53 212.6 211 55.0
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 6.5e-53 211.5 213 54.9
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.9e-52 209.9 211 54.5
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 1.9e-52 209.9 202 59.9
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 3.2e-52 209.1 211 54.5
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 2.7e-51 206.1 213 53.1
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 3.0e-50 202.6 212 53.8
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 5.2e-50 201.8 212 53.8
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 2.0e-49 199.9 211 54.0
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 4.4e-49 198.7 214 54.7
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 5.7e-49 198.4 209 52.2
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 1.3e-48 197.2 211 52.6
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 1.3e-48 197.2 211 53.6
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.7e-48 196.8 210 55.2
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 4.8e-48 195.3 212 54.2
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 6.3e-48 194.9 212 52.8
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 8.2e-48 194.5 211 53.6
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 8.2e-48 194.5 212 53.8
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 8.2e-48 194.5 213 54.0
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.1e-47 194.1 212 53.8
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.1e-47 194.1 212 53.8
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 1.4e-47 193.7 212 54.2
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 2.4e-47 193.0 212 53.3
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 3.1e-47 192.6 209 51.2
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 4.1e-47 192.2 212 51.4
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 5.3e-47 191.8 213 52.1
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 5.3e-47 191.8 214 50.5
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 1.2e-46 190.7 211 52.6
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.6e-46 190.3 212 52.8
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.7e-46 189.5 211 50.7
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 7.7e-46 188.0 211 51.2
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.0e-45 187.6 212 51.9
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.7e-45 186.8 217 50.7
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 5.0e-45 185.3 215 49.3
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 5.0e-45 185.3 212 51.9
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 8.5e-45 184.5 211 50.2
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 8.5e-45 184.5 212 51.9
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 1.5e-44 183.7 211 51.2
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 1.5e-44 183.7 212 52.4
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 2.5e-44 183.0 212 51.9
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 2.5e-44 183.0 211 54.0
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.2e-44 182.6 208 51.4
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 5.5e-44 181.8 210 50.0
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 9.4e-44 181.0 212 49.1
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 1.2e-43 180.6 215 47.9
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 4.7e-43 178.7 208 51.0
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 4.7e-43 178.7 211 49.8
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 6.1e-43 178.3 209 50.2
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 1.0e-42 177.6 211 50.7
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 1.0e-42 177.6 205 51.7
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.4e-42 177.2 212 52.4
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.4e-42 177.2 211 49.8
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 3.0e-42 176.0 219 48.9
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 4.0e-42 175.6 207 51.7
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 5.2e-42 175.3 198 52.5
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 8.8e-42 174.5 215 48.8
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 1.5e-41 173.7 213 50.2
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 2.0e-41 173.3 213 47.4
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 2.0e-41 173.3 201 49.3
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.0e-41 173.3 212 48.6
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 2.6e-41 172.9 200 51.0
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 3.4e-41 172.6 201 51.2
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 4.4e-41 172.2 215 51.2
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 5.7e-41 171.8 213 48.8
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 7.5e-41 171.4 199 52.3
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 7.5e-41 171.4 209 51.7
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 9.8e-41 171.0 212 46.7
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 1.3e-40 170.6 197 53.3
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 1.3e-40 170.6 197 53.3
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.7e-40 170.2 199 51.3
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 1.7e-40 170.2 211 48.8
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 6.3e-40 168.3 197 52.3
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 8.3e-40 167.9 211 46.4
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 1.4e-39 167.2 197 52.3
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 1.8e-39 166.8 199 50.3
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.8e-39 166.8 199 48.7
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 1.8e-39 166.8 210 49.5
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 2.4e-39 166.4 200 48.5
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 3.1e-39 166.0 210 47.6
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 1.2e-38 164.1 175 54.3
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 2.0e-38 163.3 214 48.1
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 2.0e-38 163.3 217 47.0
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 3.5e-38 162.5 215 46.0
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.0e-37 161.0 212 45.3
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 1.7e-37 160.2 215 45.6
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 2.2e-37 159.8 194 50.5
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 2.9e-37 159.5 213 45.1
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 3.8e-37 159.1 197 49.7
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 5.0e-37 158.7 200 47.5
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 6.5e-37 158.3 213 45.5
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 8.5e-37 157.9 200 46.5
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.5e-36 157.1 213 45.1
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 3.2e-36 156.0 215 44.7
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 7.2e-36 154.8 201 46.3
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 9.4e-36 154.5 210 45.2
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 1.2e-35 154.1 215 46.5
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 2.1e-35 153.3 216 44.4
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.6e-35 152.5 213 44.1
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 8.0e-35 151.4 201 47.3
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 6.8e-34 148.3 211 42.7
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 6.8e-34 148.3 139 60.4
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 2.0e-33 146.7 213 44.1
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 5.7e-33 145.2 216 43.1
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 3.7e-32 142.5 208 43.3
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 8.3e-32 141.4 209 42.6
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 5.4e-31 138.7 208 44.2
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.2e-30 137.5 215 41.9
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 2.7e-30 136.3 174 46.6
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 7.7e-30 134.8 211 41.7
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.0e-29 134.4 195 44.1
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.0e-29 134.4 207 41.1
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 2.3e-29 133.3 214 41.1
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 6.6e-29 131.7 194 45.4
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 8.6e-29 131.3 143 51.7
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.5e-28 129.8 219 40.6
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 3.6e-27 125.9 163 46.0
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.4e-26 124.0 187 43.3
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.4e-23 114.0 219 37.9
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 1.4e-23 114.0 171 41.5
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 7.0e-23 111.7 117 54.7
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.2e-22 110.9 206 36.4
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.3e-21 107.5 136 46.3
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.1e-20 104.4 118 50.0
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.5e-20 104.0 137 45.3
FAN28G2101 Fragaria x ananassa HOM05D004648 ORTHO05D005782 2.4e-07 60.1 60 55.0
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 3.2e-07 59.7 80 43.8


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