Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.3e-230 802.7 406 100.0
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 6.1e-225 783.9 406 97.8
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.6e-204 716.1 384 94.8
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 2.2e-195 685.6 384 90.9
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.6e-185 651.7 384 87.0
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 6.1e-185 651.0 386 86.3
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.1e-181 638.6 384 85.9
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.9e-180 634.4 409 82.4
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.5e-162 576.6 359 81.3
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 6.2e-161 571.2 374 80.2
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.8e-160 569.7 421 72.2
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.5e-159 566.6 377 79.6
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.3e-158 563.5 374 79.1
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.2e-158 562.8 382 76.7
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 3.7e-158 562.0 374 77.5
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.1e-157 560.5 376 77.4
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 8.9e-152 540.8 368 75.8
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 3.0e-147 525.8 392 71.7
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 3.2e-141 505.8 391 70.3
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-139 499.2 386 69.4
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.5e-138 496.9 386 69.2
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.6e-135 486.1 350 73.7
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 7.6e-135 484.6 395 66.8
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.9e-133 479.9 350 70.6
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.9e-133 479.9 384 66.1
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.9e-131 472.2 367 66.8
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.1e-130 470.7 361 68.4
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.3e-130 469.2 382 67.0
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.8e-128 463.4 386 65.3
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.9e-126 456.1 383 65.8
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 4.9e-126 455.3 354 68.4
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 9.3e-125 451.1 392 62.0
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.1e-124 449.9 397 62.0
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 1.9e-122 443.4 300 75.3
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.3e-121 440.7 317 71.9
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.1e-120 437.6 390 61.3
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 4.0e-120 435.6 334 70.1
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 9.0e-120 434.5 384 61.5
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.7e-118 430.3 340 67.4
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.8e-118 429.1 316 71.2
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.1e-117 427.6 314 71.7
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.9e-117 426.8 318 70.8
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 7.1e-117 424.9 326 67.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.1e-116 423.3 303 71.3
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 6.0e-116 421.8 343 65.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 7.9e-116 421.4 313 68.7
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.3e-115 420.6 324 67.9
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-115 420.2 326 66.0
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.3e-115 419.9 335 65.1
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.0e-115 419.5 313 70.3
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 5.1e-115 418.7 335 65.1
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 6.7e-115 418.3 294 72.1
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.1e-114 417.5 292 72.6
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.1e-114 417.5 308 69.5
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.3e-114 415.6 384 61.7
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 4.3e-114 415.6 362 63.0
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.3e-114 415.6 333 64.6
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 7.4e-114 414.8 315 68.6
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.4e-114 414.8 335 65.1
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 9.7e-114 414.5 338 64.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.6e-113 413.7 384 58.9
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 4.8e-113 412.1 323 67.8
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 6.3e-113 411.8 331 65.9
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.4e-112 410.6 398 58.3
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.1e-112 409.5 300 70.3
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.2e-111 407.5 320 67.8
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 2.0e-111 406.8 326 66.6
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.4e-111 406.0 338 64.2
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 7.7e-111 404.8 333 65.2
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.0e-110 404.4 315 66.7
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 8.5e-110 401.4 363 60.6
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.4e-109 400.6 404 58.2
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 7.2e-109 398.3 395 57.0
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 7.9e-108 394.8 334 64.4
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 3.3e-106 389.4 325 66.8
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 4.3e-106 389.0 432 53.0
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.3e-105 387.5 347 61.7
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 9.1e-104 381.3 340 61.5
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 7.7e-103 378.3 318 62.6
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 1.3e-102 377.5 295 69.2
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.4e-101 374.0 318 61.6
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 7.4e-98 361.7 314 61.8
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.1e-96 357.8 253 72.3
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.2e-95 354.4 305 62.6
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.5e-95 354.0 253 71.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.1e-93 347.8 340 56.8
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 6.1e-92 342.0 341 54.8
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.6e-90 336.7 397 51.4
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 6.3e-89 332.0 319 56.4
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 6.3e-89 332.0 372 49.5
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 8.2e-89 331.6 294 58.2
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.9e-85 320.5 239 70.3
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.9e-85 320.5 235 69.4
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.6e-84 317.4 393 49.1
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.6e-84 317.4 318 56.0
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 8.0e-84 315.1 369 50.7
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.4e-83 314.3 324 54.9
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.4e-83 314.3 324 54.9
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.8e-83 313.9 309 56.0
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.8e-83 313.9 330 53.0
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 2.0e-82 310.5 331 52.9
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.0e-78 298.1 340 51.2
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.0e-78 298.1 340 51.2
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 2.9e-78 296.6 360 49.2
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 5.0e-78 295.8 355 50.4
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 5.0e-78 295.8 355 50.4
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 4.2e-77 292.7 404 47.8
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 6.1e-76 288.9 343 49.3
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 3.9e-54 216.5 139 77.0
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.3e-45 186.8 196 57.1
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 5.6e-45 186.0 152 62.5
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 5.2e-43 179.5 124 72.6
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 1.3e-38 164.9 288 34.4
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 8.6e-38 162.2 218 49.5
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.0e-34 151.0 196 46.9
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 2.9e-33 147.1 123 61.8
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 6.0e-31 139.4 387 32.6
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 3.8e-25 120.2 119 56.3
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.9e-24 117.9 357 29.1
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 9.3e-24 115.5 323 28.8
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.2e-23 115.2 307 28.7
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.6e-20 104.8 80 66.2
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.5e-18 98.2 80 62.5
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.6e-10 70.9 48 64.6
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.9e-06 57.0 57 54.4


User provided reference genes

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