Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.8e-66 255.8 126 100.0
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.0e-62 242.3 120 99.2
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.9e-60 235.7 120 96.7
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 3.0e-58 228.4 120 94.2
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 2.2e-56 222.2 120 90.0
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 3.5e-54 214.9 120 85.8
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 5.9e-54 214.2 120 85.8
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.7e-53 212.6 120 85.0
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.0e-50 203.4 121 81.8
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.8e-50 202.6 121 81.8
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 2.0e-49 199.1 120 77.5
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 4.4e-49 198.0 120 76.7
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 3.7e-48 194.9 121 75.2
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 8.3e-48 193.7 120 75.8
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 8.3e-48 193.7 120 73.3
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.1e-47 193.4 120 74.2
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 1.1e-47 193.4 120 74.2
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 2.4e-47 192.2 120 74.2
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 2.4e-47 192.2 120 74.2
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 7.0e-47 190.7 120 72.5
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.0e-46 189.1 120 72.5
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 2.0e-46 189.1 120 72.5
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 2.0e-46 189.1 120 71.7
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 2.7e-46 188.7 120 72.5
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.7e-46 188.7 121 73.6
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 2.7e-46 188.7 120 75.0
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 2.7e-46 188.7 121 75.2
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 3.5e-46 188.3 120 73.3
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 6.0e-46 187.6 121 75.2
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 7.8e-46 187.2 120 71.7
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.3e-45 186.4 120 71.7
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.3e-45 186.4 121 72.7
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.7e-45 186.0 122 73.8
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 2.3e-45 185.7 121 72.7
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 3.0e-45 185.3 120 70.8
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 5.0e-45 184.5 121 72.7
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 6.6e-45 184.1 120 70.8
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 6.6e-45 184.1 119 72.3
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 8.6e-45 183.7 120 70.0
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 1.1e-44 183.3 120 70.8
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.1e-44 183.3 120 74.2
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 1.9e-44 182.6 120 68.3
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.9e-44 182.6 121 69.4
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 5.6e-44 181.0 118 73.7
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 7.3e-44 180.6 120 68.3
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.2e-43 179.9 120 67.5
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.2e-43 179.9 120 67.5
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.2e-43 179.9 121 70.2
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.6e-43 179.5 121 66.9
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 4.7e-43 177.9 121 68.6
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 4.7e-43 177.9 121 70.2
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 8.1e-43 177.2 123 69.1
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 8.1e-43 177.2 119 70.6
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 1.1e-42 176.8 121 69.4
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.1e-42 176.8 123 67.5
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.4e-42 176.4 123 67.5
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 2.3e-42 175.6 121 67.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 3.1e-42 175.3 121 68.6
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 4.0e-42 174.9 122 70.5
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 5.2e-42 174.5 120 69.2
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 5.2e-42 174.5 119 68.1
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 6.8e-42 174.1 122 67.2
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.2e-41 173.3 123 66.7
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 2.0e-41 172.6 118 67.8
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 2.6e-41 172.2 120 64.2
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 3.4e-41 171.8 118 67.8
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 5.8e-41 171.0 123 65.0
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 5.8e-41 171.0 120 66.7
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 9.8e-41 170.2 124 65.3
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.4e-39 166.4 121 68.6
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 1.2e-38 163.3 111 68.5
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 1.2e-38 163.3 120 65.0
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.6e-38 162.9 121 66.9
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 9.5e-36 153.7 124 62.1
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 2.1e-35 152.5 120 64.2
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 3.6e-35 151.8 124 61.3
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 8.1e-35 150.6 123 61.8
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 2.3e-34 149.1 124 60.5
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 2.3e-34 149.1 124 59.7
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 5.2e-34 147.9 120 59.2
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 6.8e-34 147.5 123 62.6
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 6.8e-34 147.5 123 62.6
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 8.9e-34 147.1 123 61.8
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 8.9e-34 147.1 123 61.8
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.2e-33 146.7 123 61.0
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 1.5e-33 146.4 123 59.3
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.5e-33 146.4 125 61.6
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 7.6e-33 144.1 123 61.8
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 1.4e-31 139.8 128 56.2
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 4.6e-30 134.8 120 56.7
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 3.3e-28 128.6 128 52.3
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.1e-27 125.9 120 55.8
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 2.4e-26 122.5 130 49.2
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 4.9e-24 114.8 72 70.8
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 6.9e-18 94.4 115 37.4
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 2.7e-14 82.4 124 33.9
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 3.5e-14 82.0 71 57.7
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 6.6e-13 77.8 91 38.5


User provided reference genes

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