Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015830 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.1e-262 909.4 471 100.0
Sopen12g020090 Solanum pennellii HOM05D008672 ORTHO05D010998 2.3e-244 848.6 471 94.1
Sopen03g005210 Solanum pennellii HOM05D008672 ORTHO05D010998 4.7e-104 382.5 465 48.0
PGSC0003DMG400036215 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.4e-76 289.3 324 51.2
PGSC0003DMG400037005 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.9e-68 264.2 343 43.4
PGSC0003DMG400003366 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.0e-66 258.5 313 46.6
PGSC0003DMG400044184 Solanum tuberosum HOM05D008672 ORTHO05D010998 9.0e-63 245.4 311 46.0
PGSC0003DMG400045407 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.8e-56 223.8 283 45.6
PGSC0003DMG400045067 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.1e-51 207.6 157 63.7
Solyc12g040490.1 Solanum lycopersicum HOM05D008672 ORTHO05D010998 1.1e-47 195.3 111 94.6
PGSC0003DMG400027983 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.4e-47 194.1 242 43.4
PGSC0003DMG400044032 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.5e-44 183.0 193 47.2
Sopen08g014190 Solanum pennellii HOM05D008672 ORTHO05D010998 2.0e-33 147.9 152 50.0
PGSC0003DMG400040133 Solanum tuberosum HOM05D008672 ORTHO05D010998 4.8e-32 143.3 186 43.5
PGSC0003DMG400041254 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.5e-30 137.1 113 56.6
PGSC0003DMG400036355 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.2e-29 134.4 210 39.0
Sopen05g016280 Solanum pennellii HOM05D008672 ORTHO05D010407 1.2e-22 112.1 107 47.7
PGSC0003DMG400039020 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.6e-22 110.9 210 37.6
PGSC0003DMG400046596 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.8e-21 107.1 166 40.4
PGSC0003DMG400044999 Solanum tuberosum HOM05D011650 ORTHO05D015191 5.0e-21 106.7 292 29.5
PGSC0003DMG400044565 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.2e-20 104.0 210 35.2
PGSC0003DMG400046030 Solanum tuberosum HOM05D008672 ORTHO05D010998 4.7e-19 100.1 68 67.6
Sopen06g014140 Solanum pennellii HOM05D011650 ORTHO05D015191 2.3e-18 97.8 273 28.2
Sopen08g014990 Solanum pennellii HOM05D008672 ORTHO05D010998 8.8e-18 95.9 81 54.3
PGSC0003DMG400044059 Solanum tuberosum HOM05D008672 ORTHO05D010998 4.8e-16 90.1 67 62.7
PGSC0003DMG400029893 Solanum tuberosum HOM05D008672 ORTHO05D010998 8.3e-16 89.4 215 34.4
Manes.17G097500 Manihot esculenta HOM05D001572 ORTHO05D000733 5.9e-14 83.2 260 26.5
Manes.15G146400 Manihot esculenta HOM05D001572 ORTHO05D000585 7.7e-14 82.8 204 27.9
PGSC0003DMG400046419 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.0e-13 80.1 167 32.9
PGSC0003DMG400038339 Solanum tuberosum HOM05D008672 ORTHO05D010998 6.5e-13 79.7 121 38.0
Sopen09g010600 Solanum pennellii HOM05D000006 ORTHO05D010998 1.5e-12 78.6 111 44.1
PGSC0003DMG400038370 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.9e-12 78.2 161 35.4
PGSC0003DMG400045128 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.5e-12 77.8 157 34.4
Medtr0014s0490 Medicago truncatula HOM05D001572 ORTHO05D000733 5.5e-12 76.6 205 28.3
Medtr8g446580 Medicago truncatula HOM05D001572 ORTHO05D000733 7.2e-12 76.3 244 21.3
Medtr8g446610 Medicago truncatula HOM05D001572 ORTHO05D000733 7.2e-12 76.3 244 21.3
Medtr8g075670 Medicago truncatula HOM05D001572 ORTHO05D000733 9.4e-12 75.9 205 27.8
PGSC0003DMG400021047 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.7e-11 74.3 121 37.2
Phvul.005G105100 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 4.7e-11 73.6 215 25.6
VMungo0251G2508 Vigna mungo HOM05D000775 ORTHO05D000585 2.3e-10 71.2 218 26.6
arahy.Tifrunner.gnm1.ann1.IH7N68 Arachis hypogaea HOM05D001572 ORTHO05D000733 4.0e-10 70.5 182 26.9
Medtr6g472020 Medicago truncatula HOM05D001572 ORTHO05D000733 4.0e-10 70.5 190 22.1
Sopen07g008390 Solanum pennellii HOM05D008672 ORTHO05D010998 4.0e-10 70.5 130 36.2
Phvul.009G019700 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 5.2e-10 70.1 285 27.7
Glyma.17G252900 Glycine max HOM05D005504 ORTHO05D002688 6.8e-10 69.7 173 27.7
Medtr8g469050 Medicago truncatula HOM05D001572 ORTHO05D000733 1.5e-09 68.6 230 19.6
Medtr0313s0020 Medicago truncatula HOM05D001572 ORTHO05D000733 2.0e-09 68.2 210 26.2
Medtr0313s0070 Medicago truncatula HOM05D001572 ORTHO05D000733 2.0e-09 68.2 210 26.2
Medtr1g011357 Medicago truncatula HOM05D001572 ORTHO05D000733 3.4e-09 67.4 210 27.1
Medtr1g011360 Medicago truncatula HOM05D001572 ORTHO05D000733 3.4e-09 67.4 210 27.1
Ca_27848_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-09 67.0 214 26.6
Medtr0611s0030 Medicago truncatula HOM05D001572 ORTHO05D000733 7.5e-09 66.2 285 24.6
Ca_03717_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 9.8e-09 65.9 276 24.6
Ca_27208_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 9.8e-09 65.9 208 26.0
Phvul.009G238900 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 9.8e-09 65.9 355 22.0
Ca_12137_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.7e-08 65.1 214 26.6
Ca_07842_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.8e-08 64.3 280 24.6
Ca_13981_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.8e-08 64.3 213 25.4
PGSC0003DMG400043781 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.7e-08 63.9 64 50.0
Ca_13547_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-08 63.5 218 25.7
Medtr5g047870 Medicago truncatula HOM05D001572 ORTHO05D000733 6.3e-08 63.2 210 25.7
Ca_11547_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-08 62.8 214 26.6
Medtr2g064140 Medicago truncatula HOM05D001572 ORTHO05D000733 8.3e-08 62.8 184 27.2
PGSC0003DMG400046265 Solanum tuberosum HOM05D008672 ORTHO05D010998 8.3e-08 62.8 135 30.4
Medtr0059s0100 Medicago truncatula HOM05D001572 ORTHO05D000733 1.1e-07 62.4 205 24.9
Phvul.010G071400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.4e-07 62.0 267 25.1
Ca_27759_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.8e-07 61.6 331 23.0
Medtr0254s0030 Medicago truncatula HOM05D001572 ORTHO05D000733 2.4e-07 61.2 207 26.1
Medtr0043s0140 Medicago truncatula HOM05D001572 ORTHO05D000733 3.1e-07 60.8 224 23.7
Phvul.006G022100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.1e-07 60.8 176 25.0
Ca_07239_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.1e-07 60.5 336 23.5
Ca_09576_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.1e-07 60.5 184 24.5
Sopen05g025240 Solanum pennellii HOM05D008672 ORTHO05D010998 4.1e-07 60.5 62 48.4
CAN.G458.22 Capsicum annuum HOM05D000013 ORTHO05D000011 5.4e-07 60.1 121 33.1
Ca_20523_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.4e-07 60.1 234 23.9
Lalb_Chr07g0191741 Lupinus albus HOM05D000775 ORTHO05D000585 5.4e-07 60.1 189 27.5
Oeu043643.1 Olea europaea HOM05D007980 ORTHO05D010064 5.4e-07 60.1 196 23.5
Medtr6g069270 Medicago truncatula HOM05D001572 ORTHO05D000733 7.0e-07 59.7 207 24.2
Ca_11642_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 9.1e-07 59.3 286 23.4
Oeu022699.1 Olea europaea HOM05D007980 ORTHO05D010064 9.1e-07 59.3 144 27.8
Oeu044569.1 Olea europaea HOM05D007980 ORTHO05D010064 9.1e-07 59.3 172 25.0
Oeu062693.1 Olea europaea HOM05D007980 ORTHO05D010064 9.1e-07 59.3 282 22.7
CAN.G244.19 Capsicum annuum HOM05D008672 ORTHO05D010998 1.2e-06 58.9 63 44.4
Ca_11746_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-06 58.9 205 25.4
Ca_13607_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-06 58.9 207 23.7
Ca_07605_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.6e-06 58.5 296 24.3
Ca_28441_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-06 58.2 278 23.7
Phvul.006G011400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.0e-06 58.2 299 21.7
Phvul.009G207400 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 2.0e-06 58.2 280 23.2
Phvul.009G219600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.0e-06 58.2 180 22.8
Sopen04g020270 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-06 58.2 56 50.0
Ca_24245_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.7e-06 57.8 186 24.7
Medtr0014s0310 Medicago truncatula HOM05D001572 ORTHO05D000733 2.7e-06 57.8 171 26.9
Oeu047195.1 Olea europaea HOM05D007980 ORTHO05D010064 3.5e-06 57.4 144 26.4
Ca_20461_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.5e-06 57.0 186 24.2
Sopen07g008290 Solanum pennellii HOM05D008672 ORTHO05D010998 4.5e-06 57.0 125 33.6
PGSC0003DMG400035861 Solanum tuberosum HOM05D008672 ORTHO05D010998 4.5e-06 57.0 105 29.5
Dinv40376 Davidia involucrata HOM05D008720 ORTHO05D011081 5.9e-06 56.6 125 25.6
TPR.G36253 Trifolium pratense HOM05D015142 ORTHO05D000733 5.9e-06 56.6 155 23.9
Ca_14426_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.7e-06 56.2 168 28.6
Ca_14951_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.7e-06 56.2 340 23.8


User provided reference genes

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