Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 0.0e+00 1397.1 817 100.0
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 0.0e+00 1363.2 817 89.2
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 0.0e+00 1358.6 817 88.9
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 0.0e+00 1294.3 811 90.1
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 0.0e+00 1285.0 817 85.7
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 0.0e+00 1267.3 817 82.3
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 0.0e+00 1236.5 826 83.5
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 1.5e-307 1059.3 817 69.4
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.6e-304 1049.3 821 68.2
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 2.2e-303 1045.4 820 67.1
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 3.8e-303 1044.6 816 68.0
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 1.6e-301 1039.3 820 67.1
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 2.0e-299 1032.3 820 65.7
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 2.0e-299 1032.3 820 66.5
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 2.6e-299 1031.9 821 66.1
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 7.5e-299 1030.4 819 67.6
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 5.4e-297 1024.2 816 66.5
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 3.5e-296 1021.5 818 66.1
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 3.8e-295 1018.1 817 65.5
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 1.9e-294 1015.8 844 65.4
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 2.1e-293 1012.3 821 66.5
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 2.8e-293 1011.9 819 66.2
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 2.8e-293 1011.9 820 65.2
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 2.8e-293 1011.9 822 64.6
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 1.5e-291 1006.1 857 63.4
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 2.0e-291 1005.7 821 65.5
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 4.4e-291 1004.6 821 65.4
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 1.3e-290 1003.0 821 65.2
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 2.2e-290 1002.3 818 65.0
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 4.1e-289 998.0 820 67.2
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 7.0e-289 997.3 828 64.9
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 2.0e-288 995.7 817 65.6
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 5.9e-288 994.2 787 67.6
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 2.3e-287 992.3 820 63.2
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 6.6e-287 990.7 841 64.4
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 8.6e-287 990.3 820 62.9
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 1.5e-286 989.6 817 65.6
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 4.3e-286 988.0 820 63.3
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 4.7e-285 984.6 818 64.3
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 4.0e-284 981.5 810 68.5
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 2.0e-283 979.2 809 67.0
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 2.6e-283 978.8 823 63.4
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 3.4e-283 978.4 827 62.3
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 9.8e-283 976.9 823 62.7
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 1.7e-282 976.1 813 64.1
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 3.2e-281 971.8 815 68.1
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 9.2e-281 970.3 820 63.3
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 1.2e-280 969.9 817 69.4
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 3.5e-280 968.4 819 63.2
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 1.3e-279 966.5 821 63.6
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 1.5e-278 963.0 818 69.4
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.9e-278 962.6 823 61.4
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 7.3e-278 960.7 815 66.5
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 9.5e-278 960.3 790 64.3
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 4.0e-276 954.9 890 59.9
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 8.9e-276 953.7 823 62.3
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 2.0e-275 952.6 817 62.8
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 3.4e-275 951.8 818 62.1
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 2.9e-274 948.7 815 62.8
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 1.1e-273 946.8 818 61.2
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 1.4e-273 946.4 815 62.9
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 1.4e-273 946.4 818 62.7
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 5.4e-273 944.5 820 61.3
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 7.0e-273 944.1 819 62.1
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 7.0e-273 944.1 818 62.0
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 2.7e-272 942.2 819 61.7
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 3.5e-272 941.8 815 61.3
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 1.7e-271 939.5 816 61.0
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 2.5e-270 935.6 862 65.9
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 3.3e-270 935.3 818 60.9
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 5.2e-268 927.9 842 60.7
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 1.2e-267 926.8 816 60.2
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 2.6e-267 925.6 816 59.9
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 9.9e-267 923.7 818 60.0
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 1.3e-266 923.3 816 59.9
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.7e-266 922.9 755 65.0
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 4.9e-266 921.4 754 65.4
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 8.3e-266 920.6 816 59.7
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 1.1e-265 920.2 816 59.9
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 2.1e-264 916.0 816 60.0
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 4.6e-264 914.8 816 59.8
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 7.3e-262 907.5 832 58.5
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 1.2e-261 906.7 822 60.5
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 8.1e-261 904.0 919 55.4
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 2.0e-259 899.4 828 59.8
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 2.2e-258 896.0 859 56.9
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 3.9e-255 885.2 757 63.1
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 2.1e-240 836.3 815 54.7
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 2.5e-238 829.3 819 54.5
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 1.3e-234 817.0 823 54.9
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 3.5e-232 808.9 816 55.8
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 7.2e-217 758.1 860 49.8
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 2.3e-215 753.1 677 60.1
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 1.0e-210 737.6 819 54.6
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 2.1e-208 729.9 664 64.0
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 1.0e-194 684.5 594 61.8
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 8.6e-178 628.2 627 65.6
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 3.2e-164 583.2 824 43.4
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 3.5e-163 579.7 781 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 4.0e-159 566.2 755 43.2
SalBow3G3271 Salvia bowleyana HOM05D005589 ORTHO05D006948 2.2e-141 507.3 324 77.5
ATR0759G074 Amborella trichopoda HOM05D005589 ORTHO05D006948 9.3e-140 501.9 377 66.8
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 4.6e-139 499.6 861 36.0
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 8.1e-136 488.8 827 36.4
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 5.3e-135 486.1 487 56.5
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 2.0e-134 484.2 803 38.7
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 4.4e-134 483.0 542 50.2
Hma1.2p1_0846F.1_g227820 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 9.6e-121 438.7 312 72.4
Actinidia37259 Actinidia chinensis HOM05D005589 ORTHO05D006948 1.4e-111 408.3 271 74.2
AL1G56500 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 6.9e-103 379.4 394 54.8
CDE02G1253 Ceratophyllum demersum HOM05D005589 ORTHO05D006948 4.2e-100 370.2 274 67.9
SEGI_37108 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 1.2e-91 342.0 275 59.3
AL1G56480 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 2.8e-88 330.9 313 56.5
CSS0044614 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 3.8e-77 293.9 242 68.2
Cre16.g686650 Chlamydomonas reinhardtii HOM05D005589 ORTHO05D006948 1.0e-61 242.7 808 31.8
SEGI_34947 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 2.0e-46 191.8 356 36.8
CSS0011793 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 5.6e-44 183.7 163 59.5
PRCOL_00006228 Prasinoderma coloniale HOM05D005589 ORTHO05D006948 1.6e-43 182.2 830 23.6
arahy.Tifrunner.gnm1.ann1.35TLEJ Arachis hypogaea HOM05D005589 ORTHO05D006948 5.8e-41 173.7 212 50.0
Sc21g0005380 Simmondsia chinensis HOM05D005589 ORTHO05D006948 2.1e-38 165.2 125 68.0
BcaB01g01018 Brassica carinata HOM05D005589 ORTHO05D006948 6.6e-37 160.2 119 64.7
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea HOM05D001394 ORTHO05D001237 3.4e-33 147.9 90 81.1
ATR0759G057 Amborella trichopoda HOM05D005589 ORTHO05D006948 2.1e-30 138.7 101 69.3
arahy.Tifrunner.gnm1.ann1.HF8MSC Arachis hypogaea HOM05D005589 ORTHO05D006948 1.8e-26 125.6 207 39.6
Actinidia37258 Actinidia chinensis HOM05D005589 ORTHO05D006948 5.2e-26 124.0 70 90.0
Actinidia37260 Actinidia chinensis HOM05D005589 ORTHO05D006948 9.3e-23 113.2 134 48.5
ATR0759G002 Amborella trichopoda HOM05D005589 ORTHO05D006948 9.3e-23 113.2 118 48.3
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea HOM05D001394 ORTHO05D001237 3.5e-22 111.3 69 79.7
Gohir.D08G115100 Gossypium hirsutum HOM05D005589 ORTHO05D047064 1.5e-20 105.9 70 68.6
Gorai.004G124000 Gossypium raimondii HOM05D005589 ORTHO05D047064 1.5e-20 105.9 70 68.6
SEGI_32388 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 2.7e-14 85.1 79 55.7
arahy.Tifrunner.gnm1.ann1.DV3IGD Arachis hypogaea HOM05D005589 ORTHO05D006948 4.3e-12 77.8 86 57.0
HanXRQChr10g0314321 Helianthus annuus HOM05D005589 ORTHO05D006948 1.6e-11 75.9 68 60.3
arahy.Tifrunner.gnm1.ann1.LY30IG Arachis hypogaea HOM05D005589 ORTHO05D006948 1.4e-10 72.8 173 37.0
CDE02G0022 Ceratophyllum demersum HOM05D005589 ORTHO05D006948 4.9e-08 64.3 47 66.0


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