Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 2.7e-76 288.5 137 100.0
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 4.3e-74 281.2 137 97.8
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.6e-73 278.1 137 97.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 4.5e-55 218.0 125 84.0
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 7.6e-55 217.2 125 84.8
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.5e-54 214.2 125 84.0
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.5e-53 212.2 125 82.4
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.7e-52 208.8 125 83.2
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 8.7e-51 203.8 124 80.6
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 9.7e-50 200.3 124 78.2
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.8e-49 198.7 121 79.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 3.7e-49 198.4 137 72.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.1e-48 195.3 121 79.3
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 4.1e-48 194.9 133 72.2
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 6.9e-48 194.1 124 75.0
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.9e-48 194.1 133 72.9
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 9.0e-48 193.7 118 79.7
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 9.0e-48 193.7 140 70.7
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.2e-47 193.4 124 75.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.5e-47 193.0 124 75.8
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.5e-47 193.0 124 75.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.5e-47 193.0 121 78.5
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.6e-47 192.2 124 75.0
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 3.4e-47 191.8 124 75.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 3.4e-47 191.8 124 73.4
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 4.5e-47 191.4 124 75.8
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.0e-46 190.3 124 75.0
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.0e-46 190.3 125 76.0
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.0e-46 190.3 121 77.7
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.3e-46 189.9 124 73.4
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.3e-46 189.9 124 72.6
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.2e-46 189.1 124 71.0
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.2e-46 189.1 124 74.2
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.0e-46 188.0 139 68.3
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 6.5e-46 187.6 124 73.4
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 6.5e-46 187.6 121 75.2
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 8.5e-46 187.2 124 73.4
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 8.5e-46 187.2 121 76.0
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 8.5e-46 187.2 124 71.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 8.5e-46 187.2 124 71.8
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.1e-45 186.8 124 73.4
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.4e-45 186.4 127 70.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.9e-45 186.0 128 73.4
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.5e-45 185.7 119 75.6
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.2e-45 185.3 124 72.6
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.2e-45 185.3 127 70.9
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 4.2e-45 184.9 121 72.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 4.2e-45 184.9 119 75.6
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.5e-45 184.5 124 71.0
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 5.5e-45 184.5 127 70.9
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 5.5e-45 184.5 124 68.5
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.2e-45 184.1 133 67.7
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 7.2e-45 184.1 121 73.6
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 7.2e-45 184.1 121 73.6
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.2e-44 183.3 124 71.8
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.6e-44 183.0 126 71.4
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.6e-44 181.8 118 77.1
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 3.6e-44 181.8 127 70.9
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 4.6e-44 181.4 130 65.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 6.1e-44 181.0 128 70.3
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 6.1e-44 181.0 133 66.9
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 6.1e-44 181.0 133 66.9
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 7.9e-44 180.6 121 72.7
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.0e-43 178.7 119 72.3
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 3.0e-43 178.7 124 71.8
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 5.1e-43 177.9 121 72.7
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 6.7e-43 177.6 135 65.9
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.1e-42 176.8 124 68.5
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.5e-42 176.4 135 65.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.5e-42 176.4 122 67.2
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.3e-42 175.3 122 66.4
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.3e-42 175.3 131 64.9
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 4.3e-42 174.9 122 66.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 4.3e-42 174.9 122 66.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 4.3e-42 174.9 122 66.4
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 5.7e-42 174.5 122 65.6
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 5.7e-42 174.5 124 65.3
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 9.7e-42 173.7 126 70.6
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 9.7e-42 173.7 132 65.2
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 9.7e-42 173.7 121 67.8
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 9.7e-42 173.7 124 66.9
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.3e-41 173.3 119 72.3
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.3e-41 173.3 121 73.6
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.3e-41 173.3 124 66.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.3e-41 173.3 122 68.0
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.2e-41 172.6 122 67.2
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.2e-41 172.6 117 71.8
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.8e-41 172.2 124 66.1
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 8.2e-41 170.6 121 66.1
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.1e-40 170.2 124 65.3
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.4e-40 169.9 122 68.9
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.4e-40 169.9 122 69.7
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.4e-40 169.1 121 65.3
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.1e-40 168.7 121 66.9
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 4.1e-40 168.3 125 64.8
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.3e-40 167.9 125 64.8
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.2e-39 166.8 124 68.5
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 4.5e-39 164.9 125 64.0
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 7.7e-39 164.1 127 64.6
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.7e-38 162.9 118 69.5
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 6.5e-38 161.0 122 60.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 8.5e-38 160.6 140 60.7
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.5e-37 159.1 124 62.1
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 5.5e-37 157.9 132 65.2
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 3.6e-36 155.2 127 61.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 7.9e-36 154.1 95 75.8
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.4e-35 153.3 121 62.8
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.3e-35 152.5 124 60.5
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 3.0e-35 152.1 108 69.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 3.9e-35 151.8 133 59.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 5.1e-35 151.4 120 63.3
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.7e-35 151.0 105 71.4
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 6.7e-35 151.0 130 53.8
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 9.7e-34 147.1 112 65.2
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.7e-33 146.4 96 72.9
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.8e-32 142.9 132 53.8
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 4.1e-32 141.7 122 54.1
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 5.3e-32 141.4 134 49.3
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 9.1e-32 140.6 125 53.6
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 3.5e-31 138.7 95 70.5
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.5e-31 138.7 98 70.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.9e-29 132.9 118 54.2
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 8.0e-28 127.5 124 54.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.4e-26 121.7 89 66.3
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 5.7e-26 121.3 78 69.2
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.1e-24 115.2 103 56.3
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 4.5e-23 111.7 120 45.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.7e-22 109.8 81 64.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.7e-15 85.9 79 58.2
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 3.8e-14 82.0 71 56.3
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.2e-13 77.8 56 67.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 5.2e-11 71.6 58 58.6


User provided reference genes

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