Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.7e-174 615.9 320 100.0
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 3.8e-166 588.2 320 95.6
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.5e-165 586.3 320 95.3
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 3.5e-151 538.5 320 88.8
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 4.4e-138 495.0 299 86.0
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.7e-137 493.0 300 86.7
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 5.4e-128 461.5 322 73.3
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.6e-125 450.7 320 71.6
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 5.8e-122 441.4 323 70.6
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 5.8e-122 441.4 322 70.8
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 9.9e-122 440.7 323 71.2
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 8.4e-121 437.6 299 78.9
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.9e-120 436.4 324 69.1
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 2.4e-120 436.0 323 69.3
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.2e-120 435.6 321 70.4
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 5.4e-120 434.9 322 70.2
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 2.3e-118 429.5 283 74.9
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 5.1e-118 428.3 323 68.1
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 8.7e-118 427.6 341 65.7
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 1.9e-117 426.4 324 67.6
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 3.3e-117 425.6 327 69.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.3e-117 425.6 320 68.4
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.3e-116 423.7 287 73.5
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 2.1e-116 422.9 321 67.3
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 2.1e-116 422.9 325 66.8
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 3.6e-116 422.2 280 76.4
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 8.1e-116 421.0 323 66.3
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.1e-115 420.6 324 66.7
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.4e-115 420.2 322 66.5
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 3.1e-115 419.1 324 65.1
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 2.6e-114 416.0 323 65.6
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 9.9e-114 414.1 315 68.3
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.7e-113 413.3 296 68.9
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 2.9e-113 412.5 265 75.8
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 8.4e-113 411.0 323 68.1
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.4e-112 410.2 324 65.7
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.4e-112 410.2 279 72.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 1.4e-112 410.2 327 65.7
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 2.4e-112 409.5 328 64.9
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 2.4e-112 409.5 326 64.7
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 2.4e-112 409.5 325 64.9
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 3.2e-112 409.1 287 70.7
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 3.2e-112 409.1 308 66.9
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 4.2e-112 408.7 328 64.9
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.2e-111 407.1 323 63.8
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 1.2e-111 407.1 269 73.6
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 1.6e-111 406.8 289 67.8
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 2.1e-111 406.4 269 73.6
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 2.7e-111 406.0 328 64.3
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 4.6e-111 405.2 254 77.6
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.6e-111 405.2 326 64.4
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 1.0e-110 404.1 362 61.0
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 1.8e-110 403.3 324 65.7
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 2.3e-110 402.9 254 77.2
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.0e-110 402.5 320 63.8
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 5.1e-110 401.7 319 64.9
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.1e-110 401.7 322 63.0
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 2.5e-109 399.4 308 64.9
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 5.6e-109 398.3 289 67.1
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 9.6e-109 397.5 319 63.0
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.3e-108 397.1 271 70.1
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.6e-108 396.7 328 60.4
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.1e-108 396.4 271 72.3
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 6.2e-108 394.8 327 60.2
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.1e-107 394.0 321 62.3
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.1e-107 394.0 323 61.3
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 1.4e-107 393.7 286 69.6
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.4e-107 393.7 265 72.1
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 2.4e-107 392.9 265 72.1
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 1.2e-106 390.6 279 68.1
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 1.5e-106 390.2 271 68.6
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 3.4e-106 389.0 281 69.0
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 1.1e-104 384.0 339 60.5
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 1.9e-104 383.3 326 61.0
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 2.5e-104 382.9 332 59.3
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 5.5e-104 381.7 344 59.0
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.2e-103 380.6 281 66.9
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 5.1e-102 375.2 237 77.2
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 8.7e-102 374.4 282 66.3
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 2.5e-101 372.9 270 66.7
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 4.3e-101 372.1 282 66.3
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 3.1e-99 365.9 264 67.8
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 5.3e-99 365.2 281 66.2
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.2e-98 364.0 268 67.2
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.6e-98 362.8 238 74.4
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 3.4e-98 362.5 267 67.0
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 8.5e-97 357.8 269 68.4
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 4.2e-96 355.5 265 65.3
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 5.5e-96 355.1 251 68.5
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.6e-95 352.1 236 71.2
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.9e-94 349.0 395 50.4
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.1e-93 347.4 237 72.2
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 8.2e-92 341.3 212 78.3
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.1e-91 340.9 273 67.4
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 5.0e-89 332.0 325 54.5
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 1.0e-86 324.3 267 64.0
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 8.8e-86 321.2 250 63.6
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.7e-84 317.0 212 71.2
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 6.3e-76 288.5 280 53.2
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 6.5e-73 278.5 289 49.8
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.2e-69 267.7 220 63.2
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 3.7e-68 262.7 243 56.0
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 1.8e-67 260.4 284 49.3
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 8.5e-65 251.5 251 53.4
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 6.8e-62 241.9 250 50.0
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 3.1e-59 233.0 148 76.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 2.0e-53 213.8 277 45.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.6e-47 194.1 129 72.1
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 2.0e-37 160.6 105 73.3
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.6e-29 133.7 88 73.9
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 7.5e-29 132.1 88 73.9
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.1e-24 118.2 81 70.4
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.1e-19 99.0 74 64.9
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.6e-18 97.8 64 70.3
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 4.6e-18 96.3 76 60.5
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.9e-16 90.9 260 29.2
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 3.6e-07 60.1 36 72.2
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 8.1e-07 58.9 35 74.3


User provided reference genes

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