Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 5.6e-126 454.1 206 100.0
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 5.8e-115 417.5 206 91.3
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 1.9e-110 402.5 207 87.0
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.7e-109 397.9 207 85.0
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 1.8e-100 369.4 206 82.5
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.4e-99 365.2 206 81.6
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.2e-97 358.2 200 79.5
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-94 349.7 189 82.5
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.8e-87 326.2 201 74.6
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.3e-86 322.0 201 73.6
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 1.1e-84 317.0 203 70.9
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 4.2e-81 305.1 228 63.6
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.7e-79 297.7 203 69.5
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.3e-78 295.0 203 68.5
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.1e-77 292.7 203 67.5
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.6e-75 285.8 184 69.0
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 3.4e-75 285.4 147 85.7
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.3e-74 283.5 148 85.8
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.2e-74 282.7 147 84.4
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 2.2e-74 282.7 185 69.7
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.5e-74 280.8 147 83.7
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 2.2e-66 256.1 148 78.4
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 9.4e-57 224.2 147 69.4
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.7e-56 221.9 197 54.3
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 6.7e-55 218.0 243 48.1
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 8.2e-53 211.1 185 52.4
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 4.5e-51 205.3 202 52.5
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 5.0e-50 201.8 227 48.5
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 7.5e-46 188.0 222 43.7
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-44 184.1 215 46.0
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-41 174.1 215 42.8
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 3.0e-39 166.0 206 42.2
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 8.8e-39 164.5 140 57.1
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.1e-36 156.0 132 57.6
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 3.5e-35 152.5 135 54.8
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 7.7e-35 151.4 152 52.6
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-29 133.7 146 47.3
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.2e-29 133.3 146 47.3
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 3.5e-27 125.9 128 48.4
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 1.0e-23 114.4 132 43.2
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 3.0e-23 112.8 77 61.0
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 8.0e-16 88.2 54 72.2
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.8e-15 87.0 125 41.6
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.2e-14 84.3 60 65.0
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.0e-14 83.6 56 67.9
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 4.4e-14 82.4 58 63.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 4.4e-14 82.4 56 66.1
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 1.3e-13 80.9 56 64.3
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 1.7e-13 80.5 54 64.8
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 8.3e-13 78.2 58 60.3
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.1e-12 77.8 56 57.1
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 1.1e-12 77.8 56 62.5
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 2.4e-12 76.6 54 61.1
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 3.2e-12 76.3 51 68.6
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 3.2e-12 76.3 56 55.4
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.2e-12 76.3 82 45.1
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 4.1e-12 75.9 56 60.7
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 4.1e-12 75.9 56 60.7
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 7.0e-12 75.1 56 60.7
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 3.0e-10 69.7 56 55.4
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 1.5e-09 67.4 41 73.2
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 4.3e-09 65.9 51 58.8
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.2e-08 64.3 56 50.0
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 1.1e-07 61.2 55 50.9
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 1.8e-07 60.5 51 52.9
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 3.1e-07 59.7 60 45.0
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 4.0e-07 59.3 55 50.9
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 5.2e-07 58.9 57 49.1
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 6.8e-07 58.5 55 49.1
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 6.8e-07 58.5 60 43.3
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 1.2e-06 57.8 51 56.9
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 1.2e-06 57.8 55 47.3
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 1.5e-06 57.4 63 46.0
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 2.0e-06 57.0 55 49.1
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 3.4e-06 56.2 60 41.7
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 5.8e-06 55.5 64 46.9
Medtr4g032815 Medicago truncatula HOM05D007628 ORTHO05D007342 5.8e-06 55.5 50 54.0
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 9.9e-06 54.7 52 51.9


User provided reference genes

Program Settings