Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 2.2e-49 198.7 105 100.0
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 2.4e-48 195.3 105 98.1
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 2.4e-48 195.3 105 98.1
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.0e-46 189.9 105 94.3
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.1e-45 186.4 105 92.4
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 2.1e-44 182.2 105 91.4
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.0e-35 153.3 102 77.5
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 3.9e-35 151.4 102 77.5
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 5.1e-35 151.0 105 74.3
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 1.1e-34 149.8 101 75.2
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 9.7e-34 146.7 105 71.4
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.7e-33 146.0 106 73.6
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 3.7e-33 144.8 102 73.5
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 4.8e-33 144.4 102 74.5
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 8.2e-33 143.7 106 74.5
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 2.4e-32 142.1 108 71.3
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 2.4e-32 142.1 103 68.0
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 1.2e-31 139.8 103 75.7
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 3.5e-31 138.3 103 74.8
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 7.7e-31 137.1 105 70.5
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.0e-30 136.7 96 72.9
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 1.7e-30 136.0 102 69.6
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 1.7e-30 136.0 103 72.8
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 5.0e-30 134.4 103 69.9
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 6.5e-30 134.0 110 67.3
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 6.5e-30 134.0 102 67.6
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 6.5e-30 134.0 106 67.0
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 8.5e-30 133.7 101 67.3
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 1.9e-29 132.5 103 69.9
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.2e-29 131.7 107 69.2
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 69.2
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 4.2e-29 131.3 102 68.6
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 5.5e-29 131.0 100 71.0
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 7.2e-29 130.6 103 67.0
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 9.4e-29 130.2 103 65.0
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 1.2e-28 129.8 100 66.0
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 1.2e-28 129.8 107 68.2
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.6e-28 129.4 107 68.2
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.1e-28 129.0 107 67.3
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 3.6e-28 128.3 102 67.6
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 8.0e-28 127.1 102 64.7
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.0e-27 126.7 102 67.6
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 1.8e-27 125.9 101 64.4
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 1.8e-27 125.9 100 66.0
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 3.0e-27 125.2 102 66.7
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 4.0e-27 124.8 103 65.0
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 1.5e-26 122.9 106 61.3
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 1.5e-26 122.9 102 63.7
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 2.0e-26 122.5 101 61.4
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.3e-26 121.7 101 65.3
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 5.7e-26 120.9 105 61.9
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 5.7e-26 120.9 101 61.4
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 5.7e-26 120.9 99 64.6
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 7.5e-26 120.6 105 61.9
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 9.7e-26 120.2 105 61.0
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 9.7e-26 120.2 96 69.8
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 9.7e-26 120.2 105 61.9
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.7e-25 119.4 103 61.2
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 1.7e-25 119.4 104 61.5
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.2e-25 119.0 101 59.4
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 2.8e-25 118.6 105 61.0
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.7e-25 118.2 103 61.2
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 3.7e-25 118.2 102 65.7
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 8.2e-25 117.1 105 60.0
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 8.2e-25 117.1 105 60.0
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 8.2e-25 117.1 105 60.0
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 8.2e-25 117.1 105 60.0
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.1e-24 116.7 124 58.1
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 1.1e-24 116.7 103 61.2
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.4e-24 116.3 104 60.6
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 1.8e-24 115.9 106 62.3
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 3.1e-24 115.2 100 63.0
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 3.1e-24 115.2 98 63.3
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 5.3e-24 114.4 102 58.8
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 5.3e-24 114.4 116 57.8
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 2.7e-23 112.1 105 57.1
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 2.7e-23 112.1 103 58.3
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 4.5e-23 111.3 95 61.1
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 1.0e-22 110.2 100 63.0
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 2.2e-22 109.0 105 58.1
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 3.8e-22 108.2 102 59.8
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 5.0e-22 107.8 103 56.3
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.5e-22 107.5 105 59.0
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 6.5e-22 107.5 103 56.3
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 3.2e-21 105.1 108 56.5
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.2e-20 103.2 67 80.6
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 2.7e-20 102.1 104 55.8
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 5.2e-19 97.8 67 77.6
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 5.2e-19 97.8 89 60.7
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 5.2e-19 97.8 81 67.9
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 3.4e-18 95.1 68 67.6
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 2.8e-17 92.0 67 74.6
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 6.3e-17 90.9 67 73.1
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 2.4e-16 89.0 63 74.6
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 5.4e-16 87.8 64 71.9
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 9.1e-16 87.0 79 63.3
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.6e-15 86.3 54 85.2
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 2.0e-15 85.9 66 69.7
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 2.7e-15 85.5 79 62.0
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 7.7e-15 84.0 53 86.8
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.0e-14 83.6 85 55.3
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 6.5e-14 80.9 52 84.6
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 1.5e-13 79.7 50 86.0
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 3.2e-13 78.6 50 84.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-12 76.3 53 81.1
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 3.0e-11 72.0 53 71.7
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.3e-09 64.3 39 82.1
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 2.0e-07 59.3 104 34.6


User provided reference genes

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