Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.3e-128 463.0 227 100.0
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.8e-125 452.6 227 97.4
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 6.8e-125 450.7 227 96.9
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 9.8e-116 420.2 229 90.4
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.4e-114 416.4 228 91.7
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 6.0e-113 411.0 227 89.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.9e-111 406.0 228 88.6
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 3.3e-103 378.6 227 81.1
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 8.9e-101 370.5 227 81.1
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.4e-100 368.6 230 79.1
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.3e-99 366.7 228 80.3
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 2.2e-99 365.9 227 79.7
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 6.4e-99 364.4 225 79.1
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.1e-98 363.6 223 78.9
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 5.4e-98 361.3 226 77.9
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 7.1e-98 360.9 227 77.5
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 9.3e-98 360.5 227 76.7
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.5e-97 358.6 226 79.2
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 7.8e-97 357.5 226 79.6
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-96 357.1 226 78.8
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.7e-96 356.3 225 76.9
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.9e-96 355.1 226 78.8
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.9e-96 355.1 226 78.8
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 5.1e-96 354.8 226 78.3
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 5.1e-96 354.8 227 76.2
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 5.1e-96 354.8 227 76.2
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 8.7e-96 354.0 228 77.2
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 8.7e-96 354.0 225 75.6
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 8.7e-96 354.0 225 76.4
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 7.3e-95 350.9 225 77.3
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 9.6e-95 350.5 227 75.8
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.6e-94 349.7 228 76.3
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.6e-94 349.7 225 75.6
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 3.6e-94 348.6 225 75.6
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.6e-94 348.6 229 75.5
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 4.8e-94 348.2 226 76.1
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 6.2e-94 347.8 231 76.2
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 8.1e-94 347.4 231 74.9
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 8.1e-94 347.4 227 75.3
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 1.1e-93 347.1 231 73.2
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.4e-93 346.7 225 74.7
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.8e-93 346.3 225 76.4
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 2.4e-93 345.9 225 76.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.4e-93 345.9 227 74.9
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 3.1e-93 345.5 226 76.5
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 5.3e-93 344.7 229 74.2
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 9.0e-93 344.0 251 69.7
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.2e-92 343.6 229 74.2
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.5e-92 343.2 225 74.7
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.0e-92 342.8 229 76.0
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 2.6e-92 342.4 230 73.9
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.6e-92 342.4 229 73.8
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 4.4e-92 341.7 224 75.4
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 4.4e-92 341.7 225 74.7
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 5.8e-92 341.3 226 74.8
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 5.8e-92 341.3 225 72.9
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 9.9e-92 340.5 233 73.0
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 9.9e-92 340.5 225 74.2
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.2e-91 339.3 225 73.3
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 3.8e-91 338.6 229 72.9
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 6.4e-91 337.8 226 74.8
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 1.4e-90 336.7 262 64.9
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.9e-90 336.3 246 69.1
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 3.2e-90 335.5 209 80.4
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 4.2e-90 335.1 226 73.0
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 9.3e-90 334.0 210 79.0
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.2e-89 333.6 233 70.8
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 1.6e-89 333.2 226 73.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 1.6e-89 333.2 226 73.0
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 2.1e-89 332.8 226 73.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 2.1e-89 332.8 226 73.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.7e-89 332.4 225 72.0
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 1.3e-88 330.1 226 73.0
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.7e-88 329.7 236 69.1
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 1.7e-88 329.7 225 70.2
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 2.3e-88 329.3 233 73.0
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.3e-88 329.3 211 77.7
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.1e-87 327.0 210 75.7
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.5e-87 325.9 246 67.5
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 4.3e-87 325.1 209 76.1
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 9.6e-87 323.9 232 69.8
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 6.2e-86 321.2 230 69.1
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.1e-85 320.5 210 73.3
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 5.8e-84 314.7 208 74.0
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.2e-83 312.8 232 68.1
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 3.8e-83 312.0 225 71.1
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 8.4e-83 310.8 222 68.9
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 5.4e-82 308.1 209 71.8
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 3.5e-81 305.4 235 66.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 8.7e-80 300.8 226 70.8
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.3e-78 297.0 214 69.2
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.2e-76 290.4 226 66.8
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 5.8e-76 288.1 239 61.5
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 2.9e-75 285.8 152 88.2
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 5.5e-74 281.6 209 70.8
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.3e-72 276.2 238 60.5
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 5.1e-72 275.0 175 70.9
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.6e-70 270.0 176 76.7
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 3.7e-70 268.9 190 66.8
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.4e-69 266.9 225 60.0
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 6.1e-65 251.5 208 63.0
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 1.0e-64 250.8 227 58.1
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 1.3e-64 250.4 225 57.3
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.8e-64 250.0 331 47.1
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.1e-64 248.4 147 76.9
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 4.8e-62 241.9 131 87.0
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 5.9e-60 235.0 225 56.0
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 3.8e-59 232.3 145 80.0
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.2e-57 227.3 156 72.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 1.6e-57 226.9 162 61.7
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 3.4e-52 209.1 132 68.2
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 5.3e-45 185.3 180 52.2
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.1e-42 177.6 134 63.4
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 3.7e-38 162.5 159 48.4
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.0e-27 127.9 63 92.1
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.5e-26 124.0 90 67.8
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.2e-25 120.9 84 65.5
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.7e-25 119.8 63 81.0
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.0e-24 115.9 68 80.9
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 9.8e-23 111.3 142 45.1
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.7e-19 100.5 118 48.3


User provided reference genes

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