Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 4.7e-108 394.4 185 100.0
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 9.5e-101 370.2 172 100.0
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 2.8e-100 368.6 172 99.4
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 1.9e-96 355.9 172 95.3
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.9e-94 348.2 172 93.0
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.1e-93 346.7 172 93.0
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 1.2e-92 343.2 172 90.7
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 6.2e-84 314.3 172 80.8
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.1e-83 313.5 172 80.8
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.8e-83 312.8 172 79.7
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 5.2e-83 311.2 172 81.4
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 5.2e-83 311.2 172 81.4
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.6e-82 308.9 172 79.7
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 7.6e-82 307.4 172 79.1
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 7.6e-82 307.4 172 79.1
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 3.8e-81 305.1 172 80.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 4.9e-81 304.7 172 78.5
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 8.4e-81 303.9 172 80.2
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 8.4e-81 303.9 172 79.1
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 1.1e-80 303.5 172 78.5
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 1.4e-80 303.1 172 78.5
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 7.1e-80 300.8 172 76.7
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 9.3e-80 300.4 172 76.7
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 9.3e-80 300.4 172 79.1
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.2e-79 300.1 172 77.3
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 1.2e-79 300.1 172 76.7
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 4.6e-79 298.1 172 75.6
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 7.8e-79 297.4 172 77.9
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 7.8e-79 297.4 172 78.5
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 7.8e-79 297.4 172 77.3
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 1.0e-78 297.0 172 75.6
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.7e-78 296.2 172 77.9
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.7e-78 296.2 172 76.2
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 2.3e-78 295.8 172 76.2
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.3e-78 295.8 172 75.0
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 2.3e-78 295.8 172 75.6
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 3.0e-78 295.4 172 75.6
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 3.0e-78 295.4 172 75.6
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 3.0e-78 295.4 172 76.2
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 3.0e-78 295.4 172 77.3
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 3.9e-78 295.0 172 77.3
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 5.1e-78 294.7 172 76.7
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 8.7e-78 293.9 172 75.0
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 1.1e-77 293.5 172 76.2
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.1e-77 293.5 172 77.3
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.5e-77 293.1 172 76.7
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.5e-77 293.1 172 76.2
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.5e-77 293.1 172 76.2
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.5e-77 293.1 172 76.2
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 1.5e-77 293.1 172 74.4
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 1.9e-77 292.7 172 75.0
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 2.5e-77 292.4 172 76.2
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 2.5e-77 292.4 172 75.6
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 3.3e-77 292.0 172 75.6
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 4.3e-77 291.6 172 75.6
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 4.3e-77 291.6 172 76.2
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 5.6e-77 291.2 172 75.0
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 7.3e-77 290.8 172 77.9
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 7.3e-77 290.8 172 75.0
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 9.6e-77 290.4 172 75.6
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 9.6e-77 290.4 172 73.8
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.6e-76 289.7 172 75.6
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.6e-76 289.7 172 75.6
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.6e-76 289.7 172 75.0
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 2.1e-76 289.3 172 75.0
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 2.1e-76 289.3 172 75.0
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 2.1e-76 289.3 172 75.6
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 2.8e-76 288.9 179 72.6
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 4.8e-76 288.1 172 75.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 4.8e-76 288.1 172 75.0
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 4.8e-76 288.1 172 74.4
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 8.1e-76 287.3 174 73.0
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 8.1e-76 287.3 172 74.4
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 4.0e-75 285.0 172 74.4
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 5.3e-75 284.6 172 73.8
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 1.2e-74 283.5 172 73.8
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 2.0e-74 282.7 172 75.0
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 2.0e-74 282.7 172 74.4
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.6e-74 282.3 172 73.8
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 9.9e-74 280.4 172 73.8
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.7e-73 279.6 172 72.7
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 2.2e-73 279.3 172 70.9
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 3.8e-73 278.5 202 65.3
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 8.4e-73 277.3 172 71.5
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.4e-72 276.6 207 64.3
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 7.1e-72 274.2 172 72.1
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.2e-66 256.9 175 66.9
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.9e-64 249.6 150 74.7
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 3.0e-62 242.3 174 62.1
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.5e-61 240.0 131 77.9
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.3e-61 238.8 131 77.9
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 2.2e-57 226.1 147 69.4
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 2.1e-55 219.5 154 66.2
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 1.7e-49 199.9 172 58.1
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 2.9e-49 199.1 188 52.1
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 2.7e-47 192.6 172 55.2
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.8e-41 172.2 189 48.1
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 3.0e-38 162.5 182 45.1
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.3e-36 157.1 219 44.7
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 9.1e-35 151.0 92 75.0
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.5e-29 133.7 86 70.9
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 1.3e-28 130.6 183 41.0
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.2e-26 124.0 79 68.4
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 4.8e-20 102.1 85 52.9
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.1e-11 72.4 59 61.0


User provided reference genes

Program Settings