Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014910 Solanum tuberosum HOM05D000017 ORTHO05D000013 3.3e-29 131.0 63 100.0
Sopen02g005760 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-26 120.9 62 90.3
Sopen03g035430 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-26 120.9 62 90.3
Sopen04g025960 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-26 120.9 62 90.3
Sopen08g018320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-26 120.9 62 90.3
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 1.0e-14 82.8 62 58.1
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-14 80.5 61 59.0
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-14 80.5 61 59.0
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-13 78.2 61 59.0
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-13 78.2 61 52.5
Hma1.2p1_0650F.1_g195490 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-13 78.2 60 55.0
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.3e-13 77.4 61 54.1
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.3e-13 77.4 62 54.8
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.7e-13 77.0 61 55.7
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.7e-13 77.0 61 57.4
CANSAT54G2672 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-13 76.6 60 56.7
CANSAT64G2354 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-13 76.3 60 55.0
CANSAT21G0768 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-12 75.5 60 53.3
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-12 75.1 61 57.4
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-12 75.1 61 57.4
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-12 75.1 61 57.4
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-12 75.1 61 57.4
CANSAT21G0182 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-12 74.7 60 53.3
ECA247G2865 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.8e-12 73.9 59 55.9
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.3e-12 73.6 61 55.7
ECA240G3344 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.4e-11 72.4 59 54.2
Hma1.2p1_2307F.1_g319440 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-11 72.0 61 50.8
CANSAT01G1828 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-11 71.6 62 53.2
CANSAT21G1114 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-11 71.6 62 51.6
CANSAT78G0912 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-11 71.6 60 51.7
CANSAT11G0373 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-11 71.2 62 53.2
CANSAT25G3827 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-11 71.2 62 51.6
CANSAT56G1544 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-11 71.2 62 51.6
CANSAT25G3367 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-11 70.9 62 54.8
CANSAT56G2167 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-11 70.9 62 54.8
CANSAT01G2010 Cannabis sativa HOM05D000017 ORTHO05D000013 5.3e-11 70.5 60 53.3
ECA236G1612 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.1e-11 69.7 61 50.8
CANSAT56G2649 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-10 69.3 62 51.6
Eucgr.B01037 Eucalyptus grandis HOM05D000017 ORTHO05D000013 1.2e-10 69.3 60 51.7
Rhsim08G0011600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-10 69.3 62 51.6
CANSAT54G2900 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-10 68.9 62 46.8
CANSAT54G2911 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-10 68.6 62 51.6
Rhsim05G0107100 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.0e-10 68.6 60 53.3
CANSAT25G0520 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-10 68.2 62 50.0
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.6e-10 68.2 60 53.3
Rhsim05G0107300 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.9e-10 67.0 60 51.7
Rhsim09G0049900 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.9e-10 67.0 62 48.4
CANSAT11G2016 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-10 66.6 62 48.4
Dinv14599 Davidia involucrata HOM05D000017 ORTHO05D000013 7.7e-10 66.6 60 48.3
Hma1.2p1_0408F.1_g146530 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-09 66.2 60 53.3
Prupe.7G029200 Prunus persica HOM05D000017 ORTHO05D000013 1.0e-09 66.2 60 53.3
Rhsim01G0142700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-09 66.2 62 48.4
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-09 65.9 62 50.0
Atru.chr1.2633 Acer truncatum HOM05D000017 ORTHO05D000013 2.2e-09 65.1 60 46.7
Hma1.2p1_0775F.1_g216450 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-09 65.1 63 47.6
Rhsim01G0148800 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.2e-09 65.1 62 50.0
Eucgr.J03175 Eucalyptus grandis HOM05D000017 ORTHO05D000013 2.9e-09 64.7 60 46.7
Prupe.1G066000 Prunus persica HOM05D000017 ORTHO05D000013 2.9e-09 64.7 62 46.8
ECA246G2150 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.8e-09 64.3 59 52.5
RcHm_v2.0_Chr7g0185171 Rosa chinensis HOM05D000017 ORTHO05D000013 3.8e-09 64.3 60 46.7
Hma1.2p1_0257F.1_g103810 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.0e-09 63.9 60 51.7
CANSAT80G0839 Cannabis sativa HOM05D000017 ORTHO05D000013 6.5e-09 63.5 62 45.2
Hma1.2p1_0023F.1_g015280 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.5e-09 63.5 63 47.6
Prupe.7G015700 Prunus persica HOM05D045816 ORTHO05D000013 6.5e-09 63.5 57 49.1
CANSAT11G0617 Cannabis sativa HOM05D000017 ORTHO05D000013 8.5e-09 63.2 62 45.2
CANSAT21G2291 Cannabis sativa HOM05D000017 ORTHO05D000013 8.5e-09 63.2 62 45.2
ECA238G0862 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.5e-09 63.2 59 49.2
Hma1.2p1_1481F.1_g286170 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 62.8 60 46.7
Hma1.2p1_1707F.1_g298520 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 62.8 60 46.7
Rhsim04G0159500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-08 62.8 61 47.5
Atru.chr3.960 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-08 62.4 60 45.0
Atru.chr3.972 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-08 62.4 60 45.0
CANSAT56G1226 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-08 62.4 62 45.2
CANSAT80G0557 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-08 62.4 62 45.2
Hma1.2p1_0257F.1_g103480 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-08 62.4 63 42.9
QL10p022804 Quercus lobata HOM05D000017 ORTHO05D000013 1.4e-08 62.4 62 46.8
Atru.chr2.2084 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-08 62.0 60 43.3
Atru.chr9.880 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-08 62.0 60 45.0
Dinv06075 Davidia involucrata HOM05D000017 ORTHO05D000013 1.9e-08 62.0 60 48.3
ECA246G1446 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.9e-08 62.0 59 47.5
Hma1.2p1_0068F.1_g037160 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-08 62.0 63 46.0
Prupe.4G046500 Prunus persica HOM05D000017 ORTHO05D000013 1.9e-08 62.0 61 45.9
Dinv22726 Davidia involucrata HOM05D000017 ORTHO05D000013 3.2e-08 61.2 60 48.3
ECA238G0396 Erigeron canadensis HOM05D005152 ORTHO05D006162 3.2e-08 61.2 61 45.9
ECA240G0961 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.2e-08 61.2 59 42.4
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-08 61.2 62 50.0
Hma1.2p1_0085F.1_g044120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-08 61.2 62 46.8
Hma1.2p1_0085F.1_g044131 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-08 61.2 62 46.8
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-08 61.2 62 46.8
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-08 61.2 62 46.8
Prupe.6G164700 Prunus persica HOM05D000017 ORTHO05D000013 3.2e-08 61.2 56 44.6
ECA238G2823 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.2e-08 60.8 59 47.5
Hma1.2p1_0449F.1_g155270 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-08 60.8 63 44.4
Hma1.2p1_0593F.1_g185740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-08 60.8 63 44.4
Hma1.2p1_2684F.1_g326900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-08 60.8 63 44.4
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.2e-08 60.8 61 45.9
SGA_v2.0_scaffold39G15191 Striga asiatica HOM05D000017 ORTHO05D000013 4.2e-08 60.8 62 43.5
Atru.chr10.1189 Acer truncatum HOM05D000017 ORTHO05D000013 5.5e-08 60.5 59 42.4
ECA232G4215 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.5e-08 60.5 60 43.3
ECA238G0629 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.5e-08 60.5 60 43.3
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.5e-08 60.5 63 42.9
Hma1.2p1_0675F.1_g201770 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.5e-08 60.5 63 42.9
ECA234G1503 Erigeron canadensis HOM05D001936 ORTHO05D002296 7.2e-08 60.1 61 45.9
QL10p050574 Quercus lobata HOM05D000017 ORTHO05D000013 7.2e-08 60.1 62 43.5
ECA238G0389 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.4e-08 59.7 59 45.8
Hma1.2p1_0026F.1_g016405 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.4e-08 59.7 63 46.0
Hma1.2p1_0292F.1_g115670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.4e-08 59.7 63 46.0
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.4e-08 59.7 63 46.0
Hma1.2p1_1314F.1_g275035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.4e-08 59.7 63 46.0
Atru.chr2.2075 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-07 59.3 60 41.7
ECA233G3647 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-07 59.3 60 46.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 59.3 61 45.9
ECA240G2053 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-07 59.3 60 46.7
ECA248G0537 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-07 59.3 61 44.3
FvH4_3g20431 Fragaria vesca HOM05D000017 ORTHO05D000013 1.2e-07 59.3 66 42.4
PGR031G0053 Punica granatum HOM05D000017 ORTHO05D000013 1.2e-07 59.3 62 45.2
FvH4_1g28543 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-07 58.9 64 39.1
CANSAT78G0010 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-07 58.5 62 40.3
Hma1.2p1_0667F.1_g199620 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-07 58.5 63 44.4
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.1e-07 58.5 62 46.8
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 2.7e-07 58.2 60 45.0
ECA236G3026 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.7e-07 58.2 59 44.1
ECA238G0864 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.7e-07 58.2 59 42.4
Hma1.2p1_2155F.1_g315350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-07 58.2 62 45.2
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-07 58.2 60 43.3
PGR042G0757 Punica granatum HOM05D000017 ORTHO05D000013 2.7e-07 58.2 62 45.2
Rhsim07G0151200 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-07 58.2 62 45.2
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 3.6e-07 57.8 62 41.9
PGR044G0878 Punica granatum HOM05D000017 ORTHO05D000013 3.6e-07 57.8 62 43.5
ECA248G3125 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.6e-07 57.4 58 44.8
Hma1.2p1_0003F.1_g003700 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.6e-07 57.4 59 44.1
QL04p037370 Quercus lobata HOM05D000017 ORTHO05D000013 4.6e-07 57.4 62 41.9
QL11p032217 Quercus lobata HOM05D000017 ORTHO05D000013 4.6e-07 57.4 62 41.9
Rhsim10G0126100 Rhododendron simsii HOM05D000017 ORTHO05D004107 4.6e-07 57.4 62 45.2
Hma1.2p1_0257F.1_g103550 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.1e-07 57.0 58 48.3
TPR.G39608 Trifolium pratense HOM05D000017 ORTHO05D000013 6.1e-07 57.0 60 43.3
Cc00_g04510 Coffea canephora HOM05D000017 ORTHO05D000013 7.9e-07 56.6 62 40.3
ECA232G4288 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.9e-07 56.6 63 41.3
Prupe.6G181000 Prunus persica HOM05D000017 ORTHO05D000013 7.9e-07 56.6 62 43.5
Atru.chr12.2321 Acer truncatum HOM05D000017 ORTHO05D000013 1.0e-06 56.2 60 40.0
CSS0022381 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-06 56.2 60 46.7
Hma1.2p1_0542F.1_g174870 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-06 56.2 62 43.5
Hma1.2p1_0936F.1_g238946 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-06 56.2 62 43.5
Hma1.2p1_0936F.1_g238949 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-06 56.2 62 43.5
Hma1.2p1_0223F.1_g094250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 41.7
Hma1.2p1_0361F.1_g135970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 41.7
CANSAT25G0797 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-06 55.5 46 45.7
FvH4_5g24521 Fragaria vesca HOM05D000017 ORTHO05D009451 1.8e-06 55.5 62 40.3
HanXRQChr12g0384391 Helianthus annuus HOM05D000017 ORTHO05D000013 1.8e-06 55.5 70 40.0
Rhsim04G0080400 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.0e-06 54.7 62 45.2
Atru.chr2.1971 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-06 54.3 60 38.3
CANSAT11G1579 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-06 54.3 62 40.3
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-06 54.3 59 44.1
Hma1.2p1_1572F.1_g291350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-06 54.3 59 44.1
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-06 54.3 63 44.4
TWI31G1214 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.9e-06 54.3 60 43.3
Atru.chr7.813 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-06 53.9 60 41.7
ECA246G1784 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.1e-06 53.9 49 49.0
Hma1.2p1_0157F.1_g068990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-06 53.9 63 44.4
Hma1.2p1_0175F.1_g077075 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-06 53.9 60 43.3
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-06 53.9 60 43.3
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-06 53.9 60 43.3
Hma1.2p1_1218F.1_g267670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-06 53.9 60 43.3
CANSAT78G1044 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-06 53.5 40 55.0
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 6.7e-06 53.5 59 44.1
RcHm_v2.0_Chr1g0352511 Rosa chinensis HOM05D000017 ORTHO05D000013 6.7e-06 53.5 63 42.9
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 6.7e-06 53.5 63 42.9
TWI77G0979 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.7e-06 53.5 60 43.3
ECA238G2722 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.8e-06 53.1 61 42.6
FvH4_2g09291 Fragaria vesca HOM05D000017 ORTHO05D009451 8.8e-06 53.1 62 41.9
RcHm_v2.0_Chr1g0322181 Rosa chinensis HOM05D000017 ORTHO05D000013 8.8e-06 53.1 60 41.7
TWI14G1118 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.8e-06 53.1 60 41.7
TWI79G0005 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.8e-06 53.1 62 41.9
TWI79G0520 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.8e-06 53.1 60 41.7


User provided reference genes

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