Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 2.3e-45 185.3 97 100.0
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 8.1e-35 150.2 83 94.0
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.4e-34 148.7 83 92.8
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 2.2e-32 142.1 83 92.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 2.9e-32 141.7 83 88.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 8.4e-32 140.2 80 90.0
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.2e-31 137.9 80 90.0
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 3.9e-29 131.3 81 82.7
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 5.1e-29 131.0 75 90.7
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.1e-28 129.8 78 85.9
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.1e-28 129.8 74 89.2
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.9e-28 129.0 90 77.8
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.3e-28 127.9 81 84.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 5.6e-28 127.5 81 85.2
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 5.6e-28 127.5 81 84.0
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 5.6e-28 127.5 77 88.3
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 5.6e-28 127.5 81 85.2
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 7.4e-28 127.1 77 87.0
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.3e-27 126.3 78 85.9
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.6e-27 125.9 77 85.7
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 1.6e-27 125.9 81 84.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.8e-27 125.2 82 79.3
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 2.8e-27 125.2 78 85.9
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.7e-27 124.8 81 84.0
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 4.8e-27 124.4 79 86.1
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 4.8e-27 124.4 78 85.9
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 4.8e-27 124.4 74 90.5
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 6.2e-27 124.0 78 84.6
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 6.2e-27 124.0 81 82.7
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.2e-27 124.0 81 79.0
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 6.2e-27 124.0 81 79.0
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 6.2e-27 124.0 78 84.6
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 6.2e-27 124.0 78 85.9
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 6.2e-27 124.0 72 90.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 8.1e-27 123.6 81 81.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.4e-26 122.9 81 77.8
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.8e-26 122.5 82 82.9
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.8e-26 122.5 81 81.5
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.8e-26 122.5 81 81.5
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 2.4e-26 122.1 78 84.6
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 3.1e-26 121.7 81 79.0
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 3.1e-26 121.7 78 84.6
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 4.0e-26 121.3 81 80.2
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 4.0e-26 121.3 81 80.2
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 4.0e-26 121.3 71 90.1
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.9e-26 120.6 83 77.1
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.2e-25 119.8 82 79.3
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.2e-25 119.8 81 79.0
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.5e-25 119.4 72 80.6
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.5e-25 119.4 84 76.2
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.5e-25 119.4 81 79.0
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.5e-25 119.4 73 86.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.5e-25 119.4 81 76.5
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.6e-25 118.6 81 80.2
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.6e-25 118.6 77 81.8
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 3.4e-25 118.2 68 88.2
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 3.4e-25 118.2 70 82.9
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.4e-25 118.2 91 71.4
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.5e-25 117.9 71 85.9
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.5e-25 117.9 71 85.9
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.5e-25 117.9 71 85.9
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 4.5e-25 117.9 79 78.5
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.5e-25 117.9 79 78.5
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 5.8e-25 117.5 69 89.9
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 5.8e-25 117.5 73 78.1
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 7.6e-25 117.1 81 75.3
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 7.6e-25 117.1 77 83.1
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 9.9e-25 116.7 64 92.2
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 9.9e-25 116.7 65 89.2
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 9.9e-25 116.7 71 87.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 9.9e-25 116.7 81 77.8
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.3e-24 116.3 72 79.2
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.3e-24 116.3 78 78.2
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.3e-24 116.3 77 81.8
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.3e-24 116.3 78 79.5
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 78 73.1
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.2e-24 115.5 70 87.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.2e-24 115.5 70 87.1
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.2e-24 115.5 81 77.8
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.9e-24 115.2 61 93.4
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 2.9e-24 115.2 81 76.5
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 2.9e-24 115.2 74 79.7
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 3.8e-24 114.8 70 85.7
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.9e-24 114.4 71 77.5
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 4.9e-24 114.4 73 80.8
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 6.4e-24 114.0 68 85.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 6.4e-24 114.0 81 76.5
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 6.4e-24 114.0 78 76.9
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 8.4e-24 113.6 67 86.6
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.1e-23 113.2 73 74.0
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.1e-23 113.2 65 87.7
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.9e-23 112.5 78 73.1
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.9e-23 112.5 78 73.1
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.9e-23 112.5 79 75.9
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 2.4e-23 112.1 68 79.4
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 4.2e-23 111.3 78 71.8
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 5.5e-23 110.9 66 80.3
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 9.3e-23 110.2 61 86.9
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-22 109.8 75 70.7
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.6e-22 109.4 61 88.5
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-22 109.0 75 69.3
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-22 109.0 75 73.3
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-22 109.0 75 69.3
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.1e-22 109.0 75 69.3
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.1e-22 109.0 75 73.3
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.7e-22 108.6 66 78.8
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-22 108.6 75 73.3
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-22 108.6 75 73.3
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.7e-22 108.6 75 73.3
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.7e-22 108.6 75 73.3
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 3.5e-22 108.2 74 71.6
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 7.9e-22 107.1 76 65.8
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-21 106.3 63 79.4
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.3e-21 106.3 70 77.1
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 6.7e-21 104.0 67 74.6
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.3e-19 99.8 70 72.9
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.8e-19 98.6 71 67.6
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 2.9e-16 88.6 50 84.0
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 5.5e-15 84.3 68 66.2
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-14 83.2 75 57.3
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 3.9e-13 78.2 59 62.7
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 5.1e-13 77.8 55 63.6
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 3.3e-12 75.1 81 59.3
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 7.4e-12 73.9 62 66.1
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.2e-11 72.4 59 64.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.1e-10 70.1 57 61.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.8e-10 69.3 63 57.1
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-07 59.7 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-07 59.7 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-07 59.7 48 60.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.1e-06 55.8 34 82.4


User provided reference genes

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