Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 2.3e-165 585.5 300 100.0
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 3.1e-149 531.9 300 91.3
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 9.9e-148 526.9 300 90.7
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.4e-109 400.2 284 76.4
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 5.3e-109 398.3 283 76.3
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.7e-107 393.3 287 73.5
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.4e-77 293.9 284 59.9
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 1.1e-53 214.5 318 45.6
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 3.1e-48 196.4 304 43.8
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 6.8e-48 195.3 315 44.4
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 8.9e-48 194.9 315 44.4
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 4.6e-44 182.6 329 41.9
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 2.3e-43 180.3 317 40.7
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 5.0e-43 179.1 316 43.0
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 2.1e-41 173.7 314 39.5
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 3.6e-41 172.9 350 40.6
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 4.7e-41 172.6 314 43.0
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 1.1e-40 171.4 319 39.5
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 1.1e-40 171.4 330 41.8
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.9e-38 163.3 316 38.6
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 4.9e-38 162.5 320 41.2
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 6.4e-38 162.2 340 38.8
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.2e-36 157.9 317 39.1
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 1.2e-36 157.9 333 37.2
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 6.0e-36 155.6 316 39.9
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.0e-36 155.6 330 39.1
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 1.0e-35 154.8 311 41.8
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 5.1e-35 152.5 308 38.3
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 6.6e-35 152.1 318 38.1
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.1e-34 151.4 309 38.8
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.5e-34 151.0 330 37.9
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.3e-34 149.8 336 37.5
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 7.3e-34 148.7 306 37.9
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 7.3e-34 148.7 321 35.8
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 7.3e-34 148.7 319 38.6
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 9.5e-34 148.3 323 38.1
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 1.2e-33 147.9 311 37.6
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.8e-33 146.7 329 38.3
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.1e-32 144.8 317 37.2
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 1.4e-32 144.4 322 36.3
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.4e-32 144.4 322 38.2
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 1.2e-31 141.4 259 40.9
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.2e-31 141.4 327 38.2
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 2.0e-31 140.6 317 36.3
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.6e-31 140.2 311 37.0
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 3.4e-31 139.8 307 37.5
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 3.4e-31 139.8 307 36.5
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 4.4e-31 139.4 298 39.6
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 7.6e-31 138.7 318 36.2
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 1.3e-30 137.9 308 36.7
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.9e-30 136.7 329 35.0
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 3.8e-30 136.3 309 36.2
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.4e-29 134.4 313 37.4
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 2.4e-29 133.7 303 37.3
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 9.2e-29 131.7 254 40.6
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 6.0e-28 129.0 315 34.3
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 1.7e-27 127.5 296 35.1
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 2.3e-27 127.1 323 35.6
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 3.0e-27 126.7 314 37.6
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 6.6e-27 125.6 325 33.8
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 6.6e-27 125.6 325 33.8
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 6.6e-27 125.6 324 34.6
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 8.6e-27 125.2 258 40.3
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 1.1e-26 124.8 312 36.2
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 1.5e-26 124.4 263 39.5
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 4.3e-26 122.9 322 35.1
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 4.7e-25 119.4 325 34.8
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 4.0e-24 116.3 319 34.8
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 4.0e-24 116.3 299 35.8
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 4.0e-24 116.3 310 34.8
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 3.4e-23 113.2 256 37.9
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 5.8e-23 112.5 303 33.7
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 5.8e-23 112.5 277 35.7
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.7e-22 110.9 308 33.8
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 1.4e-21 107.8 340 32.1
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 5.4e-21 105.9 309 32.0
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 9.3e-21 105.1 246 34.6
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 2.1e-20 104.0 348 32.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 4.6e-20 102.8 298 32.9
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.3e-19 101.3 300 32.0
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 1.7e-19 100.9 292 31.2
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 1.9e-18 97.4 307 32.6
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.9e-18 97.4 293 33.4
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 4.0e-16 89.7 237 34.2
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 4.0e-16 89.7 298 31.5
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 2.9e-14 83.6 327 29.1
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 3.2e-13 80.1 245 33.5
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 5.4e-13 79.3 313 28.8
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 7.9e-12 75.5 332 25.3
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 1.3e-09 68.2 165 36.4
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.6e-09 66.6 150 36.7
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 2.6e-07 60.5 178 30.3
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.4e-07 60.1 73 50.7
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 1.7e-06 57.8 184 31.0
PGSC0003DMG400003786 Solanum tuberosum HOM05D038993 ORTHO05D009464 3.8e-06 56.6 28 89.3


User provided reference genes

Program Settings