Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.3e-213 746.1 382 100.0
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 4.4e-209 731.1 381 97.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 9.1e-207 723.4 387 96.1
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 1.3e-189 666.4 381 89.0
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 5.6e-188 661.0 382 88.5
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 4.7e-187 657.9 379 89.2
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 4.0e-178 628.2 380 86.3
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.1e-138 495.7 358 70.4
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 9.3e-135 484.2 386 64.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.5e-132 476.9 384 64.1
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 1.8e-130 469.9 378 64.0
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 2.6e-129 466.1 307 74.9
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 5.0e-128 461.8 382 63.1
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 2.7e-126 456.1 375 63.5
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 2.7e-126 456.1 380 63.2
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.6e-126 455.7 380 62.9
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.4e-125 453.8 313 70.6
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.8e-125 453.4 307 72.3
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 5.1e-125 451.8 374 63.9
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 1.1e-124 450.7 383 61.9
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.5e-124 450.3 370 63.5
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 2.5e-124 449.5 375 62.9
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 5.7e-124 448.4 379 62.5
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.4e-124 448.0 319 70.5
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 2.2e-123 446.4 372 62.4
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.8e-123 446.0 319 70.2
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 4.8e-123 445.3 384 60.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.1e-122 444.1 326 69.9
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-122 444.1 319 69.6
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 9.1e-122 441.0 380 61.3
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.2e-121 440.7 390 59.5
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 2.6e-121 439.5 359 63.8
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 4.5e-121 438.7 364 60.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.7e-121 438.0 307 71.3
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.0e-120 437.6 316 66.1
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.0e-120 437.6 358 63.7
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.3e-120 437.2 382 58.1
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.3e-120 437.2 336 67.3
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.7e-120 436.8 377 57.3
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.7e-120 436.8 317 67.5
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 2.2e-120 436.4 384 57.3
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.9e-120 436.0 377 59.9
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 2.9e-120 436.0 393 59.0
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 8.5e-120 434.5 385 57.7
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 1.4e-119 433.7 316 65.5
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 3.2e-119 432.6 316 65.2
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 3.2e-119 432.6 316 65.2
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 4.2e-119 432.2 302 69.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 9.4e-119 431.0 324 65.1
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 9.4e-119 431.0 352 61.9
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.2e-118 430.6 368 61.7
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.2e-118 430.6 373 60.9
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.7e-118 429.5 376 58.0
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 3.6e-118 429.1 380 59.5
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.1e-118 428.3 354 63.3
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 2.3e-117 426.4 388 57.0
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 5.1e-117 425.2 434 54.6
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 5.1e-117 425.2 378 60.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 6.7e-117 424.9 312 66.3
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 8.8e-117 424.5 301 70.8
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.6e-116 422.9 365 60.0
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 1.3e-115 420.6 324 65.4
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.7e-115 420.2 310 65.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.7e-115 420.2 310 65.8
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.7e-115 420.2 378 58.5
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 2.2e-115 419.9 301 66.4
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 3.7e-115 419.1 368 58.7
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 8.2e-115 417.9 383 58.0
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 3.1e-114 416.0 382 57.9
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 4.1e-114 415.6 301 69.4
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 5.3e-114 415.2 357 58.8
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 1.2e-113 414.1 319 66.5
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.2e-113 414.1 374 57.5
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.5e-113 412.5 389 57.6
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 4.5e-113 412.1 376 59.0
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 2.9e-112 409.5 389 57.1
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 5.0e-112 408.7 297 65.7
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.1e-111 407.5 376 57.2
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.6e-110 403.7 383 57.2
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 8.0e-110 401.4 334 62.6
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 6.3e-107 391.7 394 53.6
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.1e-106 391.0 319 63.9
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 7.0e-106 388.3 271 67.5
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.6e-105 387.1 286 67.5
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 1.3e-104 384.0 314 58.3
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 3.8e-104 382.5 367 55.3
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 8.5e-104 381.3 272 68.8
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 7.2e-103 378.3 363 55.9
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.8e-101 373.6 352 56.8
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 4.0e-101 372.5 302 60.6
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.4e-100 369.4 295 65.1
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.8e-98 363.6 384 50.0
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.4e-98 363.2 294 62.2
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 3.5e-97 359.4 372 53.2
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 3.8e-96 355.9 327 59.3
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 9.4e-95 351.3 225 76.9
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.0e-92 343.6 277 62.1
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 9.5e-87 324.7 521 41.3
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 2.8e-86 323.2 301 52.2
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.4e-84 316.2 324 55.9
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.7e-80 303.9 313 47.3
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 8.9e-77 291.6 263 57.8
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 9.8e-76 288.1 303 47.2
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 9.2e-74 281.6 299 47.2
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.3e-72 277.7 382 39.3
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 8.6e-64 248.4 252 57.1
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.2e-62 244.6 200 62.0
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 3.4e-60 236.5 245 53.9
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.9e-55 220.7 153 71.2
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.9e-55 220.7 152 69.7
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 9.0e-45 185.3 221 48.9
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.4e-44 183.0 168 57.7
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 2.2e-43 180.6 159 57.9
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 8.7e-40 168.7 129 62.0
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.8e-38 163.7 164 52.4
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 3.5e-33 146.7 164 47.6
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 1.0e-32 145.2 189 41.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.8e-32 144.4 164 47.0
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 3.1e-29 133.7 112 59.8
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.6e-28 130.6 196 35.2
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.2e-26 123.2 89 70.8
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 3.3e-23 113.6 191 34.6
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 5.3e-21 106.3 124 49.2
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 4.2e-10 70.1 40 72.5
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 4.2e-10 70.1 40 72.5
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 3.6e-09 67.0 99 42.4
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 8.8e-08 62.4 31 80.6
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 3.7e-06 57.0 128 28.9
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 4.8e-06 56.6 155 25.8
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 8.2e-06 55.8 208 23.1


User provided reference genes

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