Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.5e-265 918.3 496 100.0
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 2.4e-239 832.0 496 88.3
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 6.3e-224 780.8 496 86.5
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 2.3e-202 709.1 404 89.6
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.7e-192 675.2 496 77.0
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 4.9e-176 621.7 497 65.0
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.1e-175 620.5 495 73.1
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 2.7e-174 615.9 500 67.0
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.5e-172 610.1 495 67.1
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 2.5e-172 609.4 495 65.3
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 4.3e-172 608.6 497 64.6
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 9.5e-172 607.4 500 66.0
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 4.7e-171 605.1 498 65.7
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.8e-170 603.2 497 65.4
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.1e-170 602.4 498 66.7
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 5.2e-170 601.7 499 65.9
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.5e-169 600.1 496 66.3
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.0e-169 599.7 501 65.5
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.6e-169 599.4 497 65.6
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.6e-169 599.4 497 65.6
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 7.5e-169 597.8 498 66.9
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 3.7e-168 595.5 502 65.3
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 3.7e-168 595.5 510 62.2
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 4.1e-167 592.0 497 63.4
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 6.0e-166 588.2 501 65.9
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.0e-165 587.4 499 64.3
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.5e-164 582.8 499 65.1
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 1.2e-163 580.5 497 62.2
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 2.8e-163 579.3 503 62.8
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 4.7e-163 578.6 496 63.5
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 8.1e-163 577.8 498 65.5
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.1e-162 577.4 499 65.3
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.1e-162 577.4 499 64.9
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.4e-162 577.0 498 61.6
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 8.9e-162 574.3 498 61.2
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.6e-161 572.8 496 62.3
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 4.4e-161 572.0 516 63.2
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 9.8e-161 570.9 497 62.8
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.7e-160 570.1 496 61.9
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.2e-160 569.7 496 61.5
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 6.4e-160 568.2 499 64.1
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 8.3e-160 567.8 497 62.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 1.1e-159 567.4 497 61.2
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 4.1e-159 565.5 499 64.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 7.1e-159 564.7 500 63.6
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.2e-158 563.9 500 60.4
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 7.8e-158 561.2 500 62.6
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 4.0e-154 548.9 499 62.9
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 5.2e-154 548.5 500 61.2
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 2.0e-153 546.6 497 59.8
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 4.4e-153 545.4 503 60.8
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 5.8e-153 545.0 497 62.2
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 7.6e-153 544.7 505 61.6
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 3.8e-152 542.3 497 59.0
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 7.1e-151 538.1 506 59.1
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 7.1e-151 538.1 499 61.5
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 4.6e-150 535.4 522 59.4
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.0e-149 534.3 526 57.0
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 1.7e-149 533.5 500 61.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 6.6e-149 531.6 488 59.8
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 6.6e-149 531.6 517 58.4
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.6e-147 526.9 516 59.5
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 4.7e-147 525.4 518 60.0
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.2e-145 520.8 507 58.2
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.5e-145 520.4 508 60.2
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 2.6e-145 519.6 500 57.6
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.3e-144 517.3 510 56.1
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 6.4e-144 515.0 515 57.1
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 4.2e-143 512.3 521 56.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.1e-142 510.0 511 58.9
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.7e-142 509.6 510 55.7
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 6.0e-142 508.4 551 53.9
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.3e-141 507.3 512 56.2
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 9.6e-140 501.1 512 55.5
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.8e-139 499.6 510 55.7
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 8.1e-139 498.0 511 55.4
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 5.3e-138 495.4 520 55.0
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 5.8e-137 491.9 514 54.3
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 6.4e-136 488.4 511 56.0
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 5.4e-135 485.3 529 54.1
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 5.1e-133 478.8 509 56.6
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 6.7e-133 478.4 547 52.8
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 9.6e-132 474.6 501 53.3
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.4e-130 470.7 508 55.9
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 5.8e-129 465.3 511 55.0
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 9.9e-129 464.5 511 55.8
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 9.9e-129 464.5 511 53.4
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.7e-128 463.8 511 55.8
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.5e-126 456.1 508 53.5
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 1.1e-122 444.5 496 54.0
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 3.1e-122 443.0 513 54.0
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.2e-121 441.0 501 54.3
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 3.5e-118 429.5 351 62.1
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 3.7e-115 419.5 359 64.9
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 5.0e-112 409.1 362 63.8
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.2e-102 377.9 331 64.4
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 5.5e-95 352.4 514 43.2
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 2.8e-91 340.1 522 41.6
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.7e-91 339.7 497 43.5
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 5.7e-84 315.8 580 37.9
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.7e-80 304.3 352 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.5e-65 253.1 358 47.5
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 3.8e-64 250.0 195 63.1
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 6.0e-57 226.1 567 34.0
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 6.8e-53 212.6 142 77.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 4.6e-41 173.3 190 54.7
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 9.3e-26 122.5 324 35.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 6.0e-25 119.8 106 53.8
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.5e-15 88.6 323 31.9
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.9e-15 88.2 154 37.7
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.6e-06 58.5 82 41.5
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 1.6e-06 58.5 257 28.4
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 1.6e-06 58.5 69 44.9
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.8e-06 57.8 43 74.4


User provided reference genes

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