Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014720 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-47 191.4 99 100.0
PGSC0003DMG400031446 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.1e-34 149.8 86 87.2
PGSC0003DMG402025507 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.8e-33 143.7 83 83.1
PGSC0003DMG400014718 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.9e-32 141.7 82 84.1
Solyc06g008300.4 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.6e-32 140.6 88 78.4
PGSC0003DMG400031451 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.3e-31 138.3 81 84.0
PGSC0003DMG400039627 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.3e-31 138.3 88 79.5
Sopen06g003150 Solanum pennellii HOM05D000053 ORTHO05D000035 1.6e-30 136.0 83 79.5
PGSC0003DMG400024404 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.8e-30 135.2 86 79.1
Solyc08g067797.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.1e-30 134.0 83 80.7
PGSC0003DMG400040927 Solanum tuberosum HOM05D000152 ORTHO05D000035 1.8e-29 132.5 88 76.1
PGSC0003DMG400014719 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.0e-29 131.3 86 76.7
CAN.G1579.21 Capsicum annuum HOM05D000053 ORTHO05D000035 5.7e-28 127.5 83 78.3
CAN.G2075.4 Capsicum annuum HOM05D000053 ORTHO05D000035 5.7e-28 127.5 83 78.3
PGSC0003DMG400031448 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.7e-27 125.9 74 82.4
PGSC0003DMG400011610 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.2e-27 125.6 74 83.8
Solyc12g006020.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.9e-27 124.4 83 74.7
PGSC0003DMG400023863 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-26 122.5 79 78.5
Sopen12g001990 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-26 121.7 83 73.5
PGSC0003DMG400013898 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-26 121.7 77 80.5
PGSC0003DMG400014717 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.2e-26 120.2 75 80.0
CAN.G1002.25 Capsicum annuum HOM05D000053 ORTHO05D000035 2.7e-25 118.6 88 69.3
CAN.G575.124 Capsicum annuum HOM05D000053 ORTHO05D000058 2.7e-25 118.6 76 77.6
PGSC0003DMG400023867 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.7e-25 118.6 79 73.4
CAN.G1816.10 Capsicum annuum HOM05D000053 ORTHO05D000035 1.0e-24 116.7 83 72.3
Solyc12g100030.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.3e-24 116.3 79 74.7
CAN.G1816.13 Capsicum annuum HOM05D000053 ORTHO05D000035 3.0e-24 115.2 88 67.0
CAN.G575.83 Capsicum annuum HOM05D000053 ORTHO05D000035 3.0e-24 115.2 76 73.7
PGSC0003DMG400015824 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.0e-24 115.2 83 73.5
PGSC0003DMG401002869 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.0e-24 115.2 67 85.1
CAN.G21.7 Capsicum annuum HOM05D000053 ORTHO05D000035 6.6e-24 114.0 73 79.5
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.9e-23 112.5 70 80.0
PGSC0003DMG400023869 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.9e-23 112.5 70 80.0
Nitab4.5_0006164g0060 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.5e-23 112.1 63 84.1
Nitab4.5_0008760g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.5e-23 112.1 69 79.7
PGSC0003DMG402023866 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.3e-23 111.7 76 73.7
PGSC0003DMG400017967 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.3e-23 111.3 76 73.7
PGSC0003DMG400005538 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.6e-23 110.9 82 72.0
CAN.G575.88 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-22 109.8 83 71.1
Sopen12g023650 Solanum pennellii HOM05D000053 ORTHO05D000035 1.2e-22 109.8 66 78.8
PGSC0003DMG401004726 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.2e-22 109.8 79 70.9
Sopen06g003130 Solanum pennellii HOM05D000053 ORTHO05D000035 2.1e-22 109.0 83 69.9
PGSC0003DMG402004726 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-22 109.0 81 67.9
CAN.G575.127 Capsicum annuum HOM05D000053 ORTHO05D000035 2.8e-22 108.6 84 67.9
Solyc12g099980.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.2e-22 107.5 72 76.4
PGSC0003DMG400017969 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.2e-22 107.5 78 66.7
CAN.G1833.4 Capsicum annuum HOM05D000053 ORTHO05D000035 1.1e-21 106.7 83 68.7
Solyc06g008270.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.1e-21 106.7 83 68.7
CAN.G575.74 Capsicum annuum HOM05D000053 ORTHO05D000035 1.8e-21 105.9 65 75.4
CAN.G793.60 Capsicum annuum HOM05D000053 ORTHO05D000035 1.8e-21 105.9 76 71.1
Solyc12g049190.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.8e-21 105.9 66 75.8
PGSC0003DMG400026231 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-21 105.9 79 68.4
PGSC0003DMG401023866 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.8e-21 105.9 76 72.4
PGSC0003DMG400011611 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.3e-21 105.5 66 75.8
Nitab4.5_0011909g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.1e-21 105.1 68 73.5
Solyc12g099950.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.1e-21 105.1 64 79.7
PGSC0003DMG400005541 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.2e-21 104.4 81 69.1
PGSC0003DMG400038990 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.2e-21 104.4 63 81.0
Sopen00g010090 Solanum pennellii HOM05D000053 ORTHO05D000035 8.9e-21 103.6 64 78.1
Nitab4.5_0003736g0060 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.6e-20 102.1 100 56.0
CAN.G1579.22 Capsicum annuum HOM05D000053 ORTHO05D000035 3.4e-20 101.7 88 60.2
CAN.G520.28 Capsicum annuum HOM05D000053 ORTHO05D000035 9.8e-20 100.1 66 75.8
Nitab4.5_0002757g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.3e-19 99.8 62 74.2
Nitab4.5_0006164g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000058 1.7e-19 99.4 81 61.7
CAN.G2177.3 Capsicum annuum HOM05D000053 ORTHO05D000035 2.9e-19 98.6 65 70.8
PGSC0003DMG400017966 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.7e-19 98.2 75 69.3
CAN.G575.68 Capsicum annuum HOM05D000053 ORTHO05D000035 4.9e-19 97.8 60 76.7
PGSC0003DMG400037551 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.4e-19 97.4 80 65.0
CAN.G484.14 Capsicum annuum HOM05D000053 ORTHO05D000035 8.3e-19 97.1 62 71.0
CAN.G575.115 Capsicum annuum HOM05D000053 ORTHO05D000035 8.3e-19 97.1 76 64.5
Nitab4.5_0002757g0040 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.4e-18 95.5 82 59.8
PGSC0003DMG400004727 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.2e-18 93.6 62 74.2
CAN.G484.15 Capsicum annuum HOM05D000053 ORTHO05D000035 4.6e-17 91.3 67 74.6
CAN.G484.9 Capsicum annuum HOM05D000053 ORTHO05D000035 4.6e-17 91.3 98 50.0
CAN.G575.67 Capsicum annuum HOM05D000053 ORTHO05D000058 7.8e-17 90.5 83 62.7
Solyc09g064670.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.3e-16 89.7 61 68.9
CAN.G2157.2 Capsicum annuum HOM05D000053 ORTHO05D000035 1.7e-16 89.4 85 60.0
CAN.G484.18 Capsicum annuum HOM05D000053 ORTHO05D000035 3.0e-16 88.6 64 75.0
Solyc05g012430.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.9e-16 88.2 73 61.6
Solyc12g100010.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.1e-15 86.7 53 71.7
Sopen05g007250 Solanum pennellii HOM05D000053 ORTHO05D000035 1.9e-15 85.9 74 60.8
Nitab4.5_0000014g0450 Nicotiana tabacum HOM05D000132 ORTHO05D000058 2.5e-15 85.5 61 73.8
CAN.G941.13 Capsicum annuum HOM05D000053 ORTHO05D000035 9.5e-15 83.6 68 63.2
Nitab4.5_0008954g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.6e-14 82.8 78 59.0
PGSC0003DMG400004725 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-14 82.4 63 61.9
CAN.G575.10 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-14 81.6 74 58.1
Nitab4.5_0000233g0250 Nicotiana tabacum HOM05D000132 ORTHO05D000058 6.2e-14 80.9 76 56.6
CAN.G575.133 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-14 80.5 72 58.3
Peaxi162Scf00306g00043 Petunia axillaris HOM05D000053 ORTHO05D000035 1.8e-13 79.3 76 55.3
CAN.G575.123 Capsicum annuum HOM05D000053 ORTHO05D000035 4.0e-13 78.2 66 59.1
Peaxi162Scf00086g00054 Petunia axillaris HOM05D000053 ORTHO05D000035 4.0e-13 78.2 76 52.6
Nitab4.5_0001925g0170 Nicotiana tabacum HOM05D000053 ORTHO05D000035 8.9e-13 77.0 48 79.2
PGSC0003DMG400031452 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.2e-12 76.6 51 74.5
CAN.G484.11 Capsicum annuum HOM05D000053 ORTHO05D000035 3.4e-12 75.1 74 54.1
Peaxi162Scf00062g00217 Petunia axillaris HOM05D000053 ORTHO05D000035 1.7e-11 72.8 64 56.2
CAN.G564.15 Capsicum annuum HOM05D000053 ORTHO05D000035 2.2e-11 72.4 78 48.7
CAN.G410.22 Capsicum annuum HOM05D000053 ORTHO05D000035 2.9e-11 72.0 80 48.8
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 2.9e-11 72.0 78 53.8
PGSC0003DMG400033632 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.7e-11 71.6 70 55.7
Nitab4.5_0001925g0160 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.1e-10 70.1 70 60.0
Peaxi162Scf00062g02014 Petunia axillaris HOM05D000053 ORTHO05D000035 1.4e-10 69.7 68 54.4
Peaxi162Scf00323g00026 Petunia axillaris HOM05D000053 ORTHO05D000035 1.9e-10 69.3 69 55.1
Sopen12g034500 Solanum pennellii HOM05D000053 ORTHO05D000035 1.9e-10 69.3 72 54.2
PGSC0003DMG400005542 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.9e-10 69.3 46 73.9
Sopen12g018350 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-10 68.6 46 67.4
CAN.G208.71 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-09 66.6 68 60.3
Nitab4.5_0002757g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-09 66.6 59 57.6
Peaxi162Scf00062g00216 Petunia axillaris HOM05D000053 ORTHO05D000035 1.2e-09 66.6 76 44.7
Peaxi162Scf00086g00436 Petunia axillaris HOM05D000053 ORTHO05D000035 1.2e-09 66.6 64 50.0
Peaxi162Scf00646g00009 Petunia axillaris HOM05D000053 ORTHO05D000035 1.2e-09 66.6 64 50.0
Nitab4.5_0004389g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.6e-09 66.2 60 61.7
Solyc12g099870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.6e-09 66.2 72 52.8
Peaxi162Scf00062g00928 Petunia axillaris HOM05D000053 ORTHO05D000035 2.1e-09 65.9 62 53.2
CAN.G575.7 Capsicum annuum HOM05D000053 ORTHO05D000035 3.5e-09 65.1 58 53.4
CAN.G575.9 Capsicum annuum HOM05D000053 ORTHO05D000035 3.5e-09 65.1 66 51.5
PGSC0003DMG400004722 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.5e-09 65.1 61 54.1
PGSC0003DMG400004284 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.0e-09 64.3 58 53.4
PGSC0003DMG400005226 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.0e-09 64.3 63 49.2
Peaxi162Scf00299g00111 Petunia axillaris HOM05D000053 ORTHO05D000035 7.8e-09 63.9 64 48.4
Solyc01g009930.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.3e-08 62.4 63 47.6
Nitab4.5_0001730g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.9e-08 61.6 63 47.6
PGSC0003DMG400036994 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.1e-08 61.2 72 51.4
Solyc01g005780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 8.6e-08 60.5 63 47.6
Sopen01g001770 Solanum pennellii HOM05D000053 ORTHO05D000035 8.6e-08 60.5 63 47.6
CAN.G107.25 Capsicum annuum HOM05D000053 ORTHO05D000035 1.1e-07 60.1 62 53.2
Sopen03g006290 Solanum pennellii HOM05D000053 ORTHO05D000035 1.5e-07 59.7 64 48.4
Sopen03g006300 Solanum pennellii HOM05D000053 ORTHO05D000035 1.5e-07 59.7 72 51.4
CAN.G2075.3 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-07 59.3 39 74.4
Nitab4.5_0014151g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.9e-07 59.3 72 45.8
Solyc01g014170.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.9e-07 59.3 52 59.6
CAN.G533.2 Capsicum annuum HOM05D000053 ORTHO05D000035 2.5e-07 58.9 53 54.7
Nitab4.5_0004389g0080 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.5e-07 58.9 39 66.7
Solyc01g005760.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.5e-07 58.9 73 47.9
Nitab4.5_0009084g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 4.3e-07 58.2 69 43.5
PGSC0003DMG401021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.3e-07 58.2 69 44.9
Nitab4.5_0027046g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 5.6e-07 57.8 73 43.8
Nitab4.5_0009034g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 7.3e-07 57.4 63 49.2
Nitab4.5_0023806g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 7.3e-07 57.4 59 54.2
Sopen01g008240 Solanum pennellii HOM05D000053 ORTHO05D000035 7.3e-07 57.4 67 50.7
CAN.G282.17 Capsicum annuum HOM05D000053 ORTHO05D000035 9.5e-07 57.0 68 42.6
Cc11_g00880 Coffea canephora HOM05D000053 ORTHO05D000035 9.5e-07 57.0 71 40.8
PGSC0003DMG400021051 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.5e-07 57.0 63 49.2
Manes.03G091122 Manihot esculenta HOM05D000053 ORTHO05D000035 1.2e-06 56.6 68 42.6
Nitab4.5_0002932g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-06 56.6 73 43.8
CAN.G282.27 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-06 56.2 60 48.3
CAN.G608.6 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-06 56.2 62 43.5
PGSC0003DMG400032130 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.6e-06 56.2 71 42.3
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-06 55.8 64 45.3
CAN.G143.39 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-06 55.1 63 42.9
Solyc01g008390.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.6e-06 55.1 48 56.2
CAN.G575.104 Capsicum annuum HOM05D000033 ORTHO05D007915 4.7e-06 54.7 37 62.2
CAN.G911.12 Capsicum annuum HOM05D000053 ORTHO05D000035 4.7e-06 54.7 63 44.4
CAN.G911.22 Capsicum annuum HOM05D000053 ORTHO05D000035 4.7e-06 54.7 68 44.1
Gohir.A01G054632 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.7e-06 54.7 64 43.8
Solyc01g008410.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.7e-06 54.7 51 54.9
Solyc01g013870.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.7e-06 54.7 59 50.8
COL.COLO4_09736 Corchorus olitorius HOM05D000053 ORTHO05D000035 6.2e-06 54.3 54 46.3
Solyc12g036800.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.2e-06 54.3 37 67.6
Duzib213G0626 Durio zibethinus HOM05D000053 ORTHO05D000035 8.1e-06 53.9 55 49.1


User provided reference genes

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