Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 1.0e-87 326.6 160 100.0
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 3.4e-46 188.7 100 97.0
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 4.4e-46 188.3 100 97.0
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 1.7e-45 186.4 121 83.5
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 1.3e-42 176.8 100 89.0
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 2.0e-38 162.9 102 83.3
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 9.3e-36 154.1 100 76.0
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 1.0e-34 150.6 123 62.6
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 1.7e-34 149.8 101 73.3
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.7e-34 149.8 101 73.3
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 3.9e-34 148.7 107 71.0
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 6.6e-34 147.9 106 69.8
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 6.6e-34 147.9 100 71.0
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 8.7e-34 147.5 100 72.0
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 1.1e-33 147.1 101 75.2
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 1.5e-33 146.7 100 72.0
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 9.6e-33 144.1 104 70.2
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 9.6e-33 144.1 106 68.9
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 1.3e-32 143.7 105 68.6
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 1.6e-32 143.3 100 71.0
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 2.8e-32 142.5 105 70.5
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.8e-32 142.5 100 70.0
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.6e-32 142.1 105 69.5
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.6e-32 142.1 105 69.5
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 3.6e-32 142.1 105 69.5
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 6.2e-32 141.4 100 70.0
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.1e-31 140.6 95 70.5
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.4e-31 140.2 105 68.6
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 1.4e-31 140.2 100 71.0
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 1.4e-31 140.2 102 71.6
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 1.8e-31 139.8 114 62.3
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.8e-31 139.8 106 67.0
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 9.0e-31 137.5 111 64.9
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 2.0e-30 136.3 103 66.0
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 3.4e-30 135.6 105 65.7
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 4.5e-30 135.2 102 70.6
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 4.5e-30 135.2 98 70.4
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 7.6e-30 134.4 105 64.8
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 9.9e-30 134.0 102 63.7
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 9.9e-30 134.0 102 63.7
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 1.3e-29 133.7 109 63.3
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 3.8e-29 132.1 108 62.0
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 6.4e-29 131.3 123 54.5
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 6.4e-29 131.3 102 62.7
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 8.4e-29 131.0 105 65.7
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 1.1e-28 130.6 134 56.0
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.4e-28 130.2 102 69.6
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 4.2e-28 128.6 100 64.0
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 5.4e-28 128.3 102 62.7
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 7.1e-28 127.9 100 66.0
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 7.1e-28 127.9 102 62.7
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 9.3e-28 127.5 105 62.9
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 9.3e-28 127.5 100 63.0
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 1.2e-27 127.1 105 61.9
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 2.1e-27 126.3 105 61.0
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 2.1e-27 126.3 103 62.1
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.1e-27 126.3 104 57.7
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 2.1e-27 126.3 108 62.0
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 2.7e-27 125.9 104 62.5
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 2.7e-27 125.9 104 61.5
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 3.5e-27 125.6 105 61.9
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 3.5e-27 125.6 104 61.5
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 4.6e-27 125.2 124 54.0
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 6.0e-27 124.8 100 60.0
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 6.0e-27 124.8 124 54.0
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 6.0e-27 124.8 124 54.0
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 6.0e-27 124.8 114 57.9
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 6.0e-27 124.8 108 60.2
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 7.9e-27 124.4 105 60.0
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 7.9e-27 124.4 131 51.1
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 1.0e-26 124.0 103 65.0
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.3e-26 123.6 108 59.3
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.3e-26 123.6 99 65.7
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 1.8e-26 123.2 124 53.2
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 2.3e-26 122.9 124 53.2
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 2.3e-26 122.9 105 60.0
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 6.7e-26 121.3 105 60.0
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 8.7e-26 120.9 106 59.4
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 8.7e-26 120.9 110 61.8
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.9e-25 119.8 105 58.1
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 4.3e-25 118.6 120 51.7
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 5.6e-25 118.2 104 61.5
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 4.8e-24 115.2 133 48.1
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 1.1e-23 114.0 98 60.2
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 2.2e-21 106.3 151 44.4
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 4.2e-20 102.1 121 47.9
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 8.2e-16 87.8 57 75.4
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 1.8e-15 86.7 56 75.0
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 3.4e-14 82.4 98 46.9
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 3.8e-13 79.0 56 67.9
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 6.5e-13 78.2 63 63.5
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 7.1e-12 74.7 56 64.3
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 1.1e-09 67.4 53 62.3
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 4.3e-09 65.5 120 37.5
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 4.3e-09 65.5 54 61.1


User provided reference genes

Program Settings