Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 2.6e-220 768.5 395 100.0
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 3.9e-136 488.8 315 84.1
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 5.1e-128 461.8 307 82.1
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 2.2e-123 446.4 315 76.5
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 1.4e-117 427.2 315 74.9
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 4.1e-117 425.6 315 75.6
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.0e-55 220.7 198 61.6
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 9.9e-55 218.4 325 44.9
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 4.9e-54 216.1 332 41.0
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.6e-52 211.1 259 45.9
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 3.6e-49 199.9 334 40.1
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.1e-48 198.4 270 45.6
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 3.8e-46 189.9 203 50.7
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 4.9e-46 189.5 331 38.7
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 3.2e-45 186.8 336 39.3
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.2e-44 184.9 330 40.0
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.0e-43 181.8 333 39.3
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.0e-43 181.8 327 39.1
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 3.9e-43 179.9 333 39.0
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 9.6e-42 175.3 334 38.3
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 2.1e-41 174.1 335 36.7
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 8.1e-41 172.2 329 37.1
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 2.2e-38 164.1 192 47.4
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 6.4e-38 162.5 321 35.8
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 1.1e-37 161.8 327 35.5
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 1.4e-37 161.4 321 35.5
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 2.4e-37 160.6 325 35.7
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 2.4e-37 160.6 325 35.7
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 2.4e-37 160.6 334 35.0
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 5.4e-37 159.5 336 38.1
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 7.1e-37 159.1 325 35.4
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 3.0e-35 153.7 279 34.1
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 8.7e-35 152.1 219 41.6
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 5.6e-34 149.4 318 35.8
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 8.4e-30 135.6 200 42.0
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 1.1e-29 135.2 319 31.7
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.4e-29 134.8 319 31.7
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.9e-29 134.4 319 31.3
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 4.2e-29 133.3 259 32.4
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 6.0e-28 129.4 314 29.9
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 1.0e-27 128.6 317 30.0
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 3.9e-27 126.7 256 32.8
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 6.7e-27 125.9 217 36.9
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 1.5e-26 124.8 311 31.2
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 1.5e-26 124.8 311 30.9
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 1.5e-26 124.8 311 31.2
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 1.5e-26 124.8 311 31.2
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 4.3e-26 123.2 310 30.6
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 5.6e-26 122.9 259 31.3
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 7.4e-26 122.5 350 28.6
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 7.4e-26 122.5 312 30.4
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 7.4e-26 122.5 183 35.5
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 1.6e-25 121.3 315 29.8
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 2.1e-25 120.9 259 31.3
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 2.8e-25 120.6 256 31.6
PGSC0003DMG400037423 Solanum tuberosum HOM05D000007 ORTHO05D000521 3.7e-25 120.2 82 68.3
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 8.2e-25 119.0 319 29.8
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 1.1e-24 118.6 259 32.8
PGSC0003DMG400040264 Solanum tuberosum HOM05D000007 ORTHO05D000521 2.2e-22 110.9 82 63.4
PGSC0003DMG400045529 Solanum tuberosum HOM05D000007 ORTHO05D000521 2.5e-21 107.5 82 59.8
PGSC0003DMG400044925 Solanum tuberosum HOM05D000007 ORTHO05D000521 4.2e-21 106.7 83 57.8
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 4.2e-21 106.7 318 28.3
Nitab4.5_0006347g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000521 5.5e-21 106.3 94 55.3
PGSC0003DMG400044791 Solanum tuberosum HOM05D000007 ORTHO05D000521 5.5e-21 106.3 84 63.1
PGSC0003DMG400046639 Solanum tuberosum HOM05D000007 ORTHO05D000521 9.3e-21 105.5 83 56.6
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.1e-20 104.4 280 30.0
PGSC0003DMG400036030 Solanum tuberosum HOM05D000007 ORTHO05D000521 6.1e-20 102.8 81 54.3
Nitab4.5_0006347g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.8e-19 101.3 82 59.8
PGSC0003DMG400025124 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.8e-19 101.3 82 57.3
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.3e-19 100.9 124 40.3
PGSC0003DMG400042211 Solanum tuberosum HOM05D000007 ORTHO05D000521 3.0e-19 100.5 81 55.6
PGSC0003DMG400036974 Solanum tuberosum HOM05D000007 ORTHO05D000521 3.9e-19 100.1 80 56.2
Solyc05g010490.1 Solanum lycopersicum HOM05D000007 ORTHO05D000521 5.1e-19 99.8 83 51.8
PGSC0003DMG400045521 Solanum tuberosum HOM05D000007 ORTHO05D000521 8.7e-19 99.0 80 53.8
Solyc05g010500.1 Solanum lycopersicum HOM05D000007 ORTHO05D000521 3.3e-18 97.1 81 54.3
Nitab4.5_0000061g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000521 4.3e-18 96.7 84 58.3
PGSC0003DMG400025123 Solanum tuberosum HOM05D000007 ORTHO05D000521 4.3e-18 96.7 82 56.1
Nitab4.5_0000259g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000521 5.7e-18 96.3 94 50.0
Nitab4.5_0000259g0340 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.3e-17 95.1 79 58.2
PGSC0003DMG400046868 Solanum tuberosum HOM05D000007 ORTHO05D000521 2.8e-17 94.0 80 53.8
CAN.G184.10 Capsicum annuum HOM05D000007 ORTHO05D000521 4.8e-17 93.2 83 55.4
CAN.G184.11 Capsicum annuum HOM05D000007 ORTHO05D000521 6.3e-17 92.8 81 56.8
Sopen05g005930 Solanum pennellii HOM05D021599 ORTHO05D000521 6.3e-17 92.8 84 52.4
CAN.G184.40 Capsicum annuum HOM05D000007 ORTHO05D000521 2.4e-16 90.9 81 54.3
Peaxi162Scf00376g00044 Petunia axillaris HOM05D000007 ORTHO05D000521 4.1e-16 90.1 85 52.9
Peaxi162Scf00376g00061 Petunia axillaris HOM05D000007 ORTHO05D000521 4.1e-16 90.1 87 50.6
CAN.G222.102 Capsicum annuum HOM05D000007 ORTHO05D000521 9.0e-16 89.0 97 49.5
CAN.G222.116 Capsicum annuum HOM05D000007 ORTHO05D000521 9.0e-16 89.0 97 49.5
CAN.G222.120 Capsicum annuum HOM05D000007 ORTHO05D000521 1.5e-15 88.2 97 48.5
Peaxi162Scf00376g00064 Petunia axillaris HOM05D000007 ORTHO05D000521 4.5e-15 86.7 88 48.9
CAN.G222.91 Capsicum annuum HOM05D000007 ORTHO05D000521 5.9e-15 86.3 97 48.5
Solyc05g010210.1 Solanum lycopersicum HOM05D000007 ORTHO05D000521 5.9e-15 86.3 82 54.9
CAN.G222.88 Capsicum annuum HOM05D000007 ORTHO05D000521 7.7e-15 85.9 97 48.5
Peaxi162Scf00376g00067 Petunia axillaris HOM05D000007 ORTHO05D000521 6.5e-14 82.8 97 45.4
Peaxi162Scf00376g00068 Petunia axillaris HOM05D000007 ORTHO05D000521 8.5e-14 82.4 90 46.7
Peaxi162Scf00583g00121 Petunia axillaris HOM05D000007 ORTHO05D000521 2.5e-13 80.9 87 47.1
Peaxi162Scf00611g00002 Petunia axillaris HOM05D000007 ORTHO05D000521 3.6e-12 77.0 87 49.4
CAN.G680.1 Capsicum annuum HOM05D000007 ORTHO05D000521 1.0e-11 75.5 77 46.8
Peaxi162Scf00583g00119 Petunia axillaris HOM05D000007 ORTHO05D000521 1.0e-11 75.5 84 46.4
CAN.G184.56 Capsicum annuum HOM05D000007 ORTHO05D000521 8.2e-09 65.9 81 40.7
Rhsim04G0210700 Rhododendron simsii HOM05D000007 ORTHO05D013331 1.1e-08 65.5 87 37.9
Peaxi162Scf00583g00001 Petunia axillaris HOM05D000007 ORTHO05D000521 1.4e-08 65.1 106 41.5
Cc11_g07960 Coffea canephora HOM05D000007 ORTHO05D000521 3.1e-08 63.9 80 41.2
Peaxi162Scf00583g00011 Petunia axillaris HOM05D000007 ORTHO05D000521 3.1e-08 63.9 84 42.9
Potri.011G037200 Populus trichocarpa HOM05D000007 ORTHO05D000521 3.1e-08 63.9 84 38.1
Potri.011G037312 Populus trichocarpa HOM05D000007 ORTHO05D000521 3.1e-08 63.9 84 38.1
MSTRG.25725 Avicennia marina HOM05D000007 ORTHO05D000521 4.1e-08 63.5 78 42.3
COL.COLO4_09297 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.3e-08 63.2 94 39.4
DCAR_016968 Daucus carota HOM05D000007 ORTHO05D000521 9.1e-08 62.4 76 38.2
DCAR_016969 Daucus carota HOM05D000007 ORTHO05D000521 3.4e-07 60.5 78 37.2
Aqoxy7G00608 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 4.5e-07 60.1 76 38.2
COL.COLO4_03689 Corchorus olitorius HOM05D002102 ORTHO05D004119 7.7e-07 59.3 91 39.6
Rhsim04G0040800 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.0e-06 58.9 93 32.3
Solyc11g013890.1 Solanum lycopersicum HOM05D000007 ORTHO05D000521 1.0e-06 58.9 81 38.3
CAN.G376.9 Capsicum annuum HOM05D000007 ORTHO05D000521 1.7e-06 58.2 59 54.2
CSS0006709 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 2.2e-06 57.8 80 37.5
Haze_05545 Corylus avellana HOM05D000007 ORTHO05D000017 2.2e-06 57.8 76 35.5
Dinv01180 Davidia involucrata HOM05D000007 ORTHO05D000521 2.2e-06 57.8 79 38.0
Dinv26435 Davidia involucrata HOM05D000007 ORTHO05D000521 2.2e-06 57.8 79 38.0
Potri.001G224200 Populus trichocarpa HOM05D000007 ORTHO05D000521 2.9e-06 57.4 95 35.8
CSS0009149 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.8e-06 57.0 79 35.4
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.8e-06 57.0 93 31.2
Cfa000091 Carpinus fangiana HOM05D000007 ORTHO05D000017 5.0e-06 56.6 78 33.3
CAN.G506.5 Capsicum annuum HOM05D000007 ORTHO05D000521 6.5e-06 56.2 75 42.7
Hma1.2p1_0405F.1_g145690 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 6.5e-06 56.2 79 32.9
Hma1.2p1_2194F.1_g316800 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 6.5e-06 56.2 79 36.7
QL04p068858 Quercus lobata HOM05D000007 ORTHO05D000521 6.5e-06 56.2 81 34.6
QL04p069439 Quercus lobata HOM05D000007 ORTHO05D000521 6.5e-06 56.2 81 34.6
Haze_06950 Corylus avellana HOM05D000007 ORTHO05D000017 8.5e-06 55.8 78 33.3
Oeu047067.1 Olea europaea HOM05D000007 ORTHO05D000017 8.5e-06 55.8 84 36.9
PSO063G0614 Papaver somniferum HOM05D000007 ORTHO05D000017 8.5e-06 55.8 77 39.0
PSO648G0118 Papaver somniferum HOM05D000007 ORTHO05D000017 8.5e-06 55.8 103 31.1
SGA_v2.0_scaffold110G31296 Striga asiatica HOM05D000007 ORTHO05D000017 8.5e-06 55.8 145 31.0


User provided reference genes

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