Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.4e-55 217.6 103 100.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 7.8e-44 180.3 88 95.5
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.6e-41 172.6 88 90.9
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 2.2e-38 162.2 88 81.8
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 6.4e-38 160.6 88 83.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.0e-37 157.1 88 80.7
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 9.5e-34 146.7 107 66.4
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 5.2e-24 114.4 91 54.9
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 5.8e-23 110.9 83 56.6
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.6e-23 110.5 90 53.3
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 9.9e-23 110.2 124 44.4
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.7e-22 109.4 91 53.8
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 4.9e-22 107.8 82 53.7
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 2.4e-21 105.5 91 52.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 2.4e-21 105.5 91 52.7
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 4.2e-21 104.8 99 48.5
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 5.4e-21 104.4 104 45.2
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 5.4e-21 104.4 91 51.6
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 7.1e-21 104.0 91 51.6
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.2e-20 103.2 91 50.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 2.7e-20 102.1 83 48.2
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 3.5e-20 101.7 86 50.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 3.5e-20 101.7 86 50.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.5e-20 101.7 91 50.5
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.5e-20 101.7 91 53.8
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 4.6e-20 101.3 81 53.1
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.0e-20 100.9 87 50.6
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 6.0e-20 100.9 91 50.5
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 6.0e-20 100.9 90 48.9
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 7.8e-20 100.5 91 49.5
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.8e-20 100.5 91 49.5
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 7.8e-20 100.5 91 49.5
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 7.8e-20 100.5 91 50.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 7.8e-20 100.5 82 51.2
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.0e-19 100.1 86 50.0
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.3e-19 99.8 90 48.9
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.7e-19 99.4 90 48.9
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.7e-19 99.4 91 52.7
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.7e-19 99.4 90 50.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 3.9e-19 98.2 91 48.4
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 3.9e-19 98.2 91 48.4
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.9e-19 98.2 91 50.5
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 5.1e-19 97.8 83 54.2
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.1e-19 97.8 91 48.4
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.1e-18 96.7 90 46.7
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.5e-18 95.5 83 53.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.5e-18 95.5 114 42.1
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.5e-18 95.5 91 49.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.5e-18 95.5 91 49.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 2.5e-18 95.5 91 50.5
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 4.3e-18 94.7 86 51.2
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 4.3e-18 94.7 96 46.9
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 4.3e-18 94.7 93 48.4
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 5.6e-18 94.4 91 46.2
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 7.3e-18 94.0 86 51.2
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 7.3e-18 94.0 86 50.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 7.3e-18 94.0 84 47.6
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 9.6e-18 93.6 91 42.9
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 9.6e-18 93.6 91 45.1
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 9.6e-18 93.6 90 45.6
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.3e-17 93.2 77 50.6
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.3e-17 93.2 91 51.6
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 1.3e-17 93.2 86 51.2
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.3e-17 93.2 88 53.4
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.3e-17 93.2 86 48.8
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.6e-17 92.8 92 48.9
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.6e-17 92.8 92 48.9
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.6e-17 92.8 86 48.8
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.1e-17 92.4 86 48.8
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.1e-17 92.4 86 47.7
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.1e-17 92.4 84 53.6
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.1e-17 92.4 95 46.3
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 2.1e-17 92.4 88 51.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 3.6e-17 91.7 91 47.3
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.6e-17 91.7 91 47.3
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.6e-17 91.7 91 47.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.6e-17 91.7 91 47.3
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.6e-17 91.7 91 47.3
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 3.6e-17 91.7 91 51.6
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 4.8e-17 91.3 91 45.1
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 4.8e-17 91.3 89 48.3
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 8.1e-17 90.5 88 50.0
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.1e-16 90.1 89 47.2
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.4e-16 89.7 91 49.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.4e-16 89.0 85 47.1
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 2.4e-16 89.0 89 44.9
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.1e-16 88.6 65 56.9
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 3.1e-16 88.6 49 65.3
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 4.0e-16 88.2 77 48.1
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 4.0e-16 88.2 49 67.3
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 9.0e-16 87.0 85 48.2
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 9.0e-16 87.0 85 47.1
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 7.6e-15 84.0 89 46.1
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 9.9e-15 83.6 90 40.0
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.7e-14 82.8 43 69.8
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.9e-14 82.0 66 51.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.1e-13 80.1 86 43.0
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.1e-13 80.1 86 43.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.1e-13 80.1 86 41.9
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-13 79.7 91 44.0
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.4e-13 79.7 91 44.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.2e-13 78.6 81 44.4
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 9.3e-13 77.0 86 39.5
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-12 75.9 46 65.2
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 6.0e-12 74.3 62 48.4
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 2.3e-11 72.4 91 42.9
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 8.7e-11 70.5 86 39.5
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 2.4e-08 62.4 78 41.0


User provided reference genes

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