Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.1e-163 578.9 283 100.0
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 7.6e-150 533.9 283 92.6
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 4.9e-149 531.2 285 92.6
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 1.4e-124 449.9 284 79.6
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.1e-111 404.1 284 73.6
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.4e-108 394.0 283 71.4
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.6e-91 339.0 291 64.3
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.0e-89 333.2 289 65.4
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 5.7e-89 331.6 284 60.2
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.7e-80 303.5 285 62.1
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.4e-79 300.4 280 60.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 5.4e-79 298.5 191 73.3
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 1.6e-78 297.0 272 57.0
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.9e-76 290.0 227 63.4
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.5e-76 289.7 283 58.0
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 7.3e-76 288.1 196 70.4
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 1.2e-75 287.3 235 63.0
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 5.2e-74 282.0 235 60.9
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 2.0e-73 280.0 245 59.2
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 4.4e-73 278.9 189 69.8
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 4.4e-73 278.9 221 63.8
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 5.8e-73 278.5 221 63.3
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.7e-72 276.9 197 68.0
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 8.3e-72 274.6 223 61.4
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 3.2e-71 272.7 224 61.6
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.6e-70 270.4 239 60.3
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 3.5e-70 269.2 190 67.4
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 6.0e-70 268.5 251 59.0
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 7.8e-70 268.1 256 54.7
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.3e-69 267.3 227 61.2
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 2.3e-69 266.5 227 67.4
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 2.3e-69 266.5 190 67.9
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 3.0e-69 266.2 202 65.3
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 3.9e-69 265.8 225 60.4
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 5.0e-69 265.4 195 67.2
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.9e-68 263.5 239 58.6
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.9e-68 263.5 227 60.4
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 3.3e-68 262.7 232 55.2
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 4.3e-68 262.3 263 52.9
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 4.3e-68 262.3 193 66.8
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 5.6e-68 261.9 216 63.9
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 9.5e-68 261.2 228 60.5
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 1.2e-67 260.8 212 62.3
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.6e-67 260.4 228 60.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 2.1e-67 260.0 257 52.9
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.1e-67 260.0 229 60.3
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.1e-67 260.0 227 59.9
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.6e-67 259.2 227 59.9
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 3.6e-67 259.2 272 50.0
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 6.2e-67 258.5 257 52.9
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 8.1e-67 258.1 204 65.2
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.1e-66 257.7 268 54.1
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.1e-66 257.7 240 56.2
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.4e-66 257.3 228 58.3
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.8e-66 256.9 204 60.8
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.8e-66 256.9 204 60.8
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.8e-66 256.9 199 65.8
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.3e-66 256.5 265 53.6
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 3.1e-66 256.1 192 64.6
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 4.0e-66 255.8 206 62.6
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.2e-65 254.2 218 61.5
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 2.0e-65 253.4 232 56.0
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 9.9e-65 251.1 188 63.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 9.9e-65 251.1 192 66.7
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.3e-64 250.8 205 61.0
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 2.2e-64 250.0 248 54.8
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 2.2e-64 250.0 241 54.4
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 4.9e-64 248.8 200 64.5
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 6.4e-64 248.4 201 62.7
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.0e-61 241.1 243 51.4
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 3.0e-61 239.6 243 51.4
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 3.0e-61 239.6 243 51.4
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.1e-60 237.7 191 61.3
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 2.5e-60 236.5 226 55.3
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.3e-60 236.1 266 49.6
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 4.3e-60 235.7 199 58.8
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.6e-59 233.8 208 57.2
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.1e-59 233.4 208 57.2
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 3.6e-59 232.6 225 54.2
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 4.7e-59 232.3 227 52.9
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 4.7e-59 232.3 205 57.6
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.1e-58 231.1 223 53.4
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 2.4e-58 229.9 191 57.6
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 3.1e-58 229.6 199 57.3
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 4.0e-58 229.2 246 50.4
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 4.0e-58 229.2 242 50.4
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 6.8e-58 228.4 225 53.3
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 2.0e-57 226.9 196 58.2
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 5.8e-57 225.3 183 61.2
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 7.6e-57 224.9 200 58.0
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.7e-56 223.8 157 66.2
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.7e-56 223.8 231 54.1
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 8.4e-56 221.5 196 56.1
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.4e-55 219.9 199 56.3
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.1e-55 219.2 203 55.2
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 9.6e-52 208.0 222 51.8
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 6.9e-50 201.8 146 67.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.2e-49 201.1 217 48.4
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 4.4e-49 199.1 144 68.1
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.3e-48 197.6 282 44.0
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 6.0e-46 188.7 188 50.0
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 9.6e-44 181.4 169 60.4
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 2.1e-38 163.7 142 61.3
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 4.6e-38 162.5 181 47.0
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.8e-37 160.6 117 66.7
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 3.7e-35 152.9 187 46.0
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 9.0e-34 148.3 158 54.4
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.5e-33 147.5 157 51.6
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.5e-33 147.5 131 57.3
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.1e-31 141.4 205 42.9
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 2.7e-30 136.7 146 52.7
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.5e-30 136.3 116 61.2
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.8e-26 124.0 153 49.0
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 1.5e-25 120.9 138 50.7
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.0e-24 118.2 111 56.8
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 7.1e-23 112.1 128 53.1
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 7.9e-22 108.6 89 59.6
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.5e-20 103.6 95 60.0
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-17 94.4 112 39.3
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 1.7e-16 90.9 221 31.2
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 1.7e-16 90.9 94 54.3
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 6.9e-10 68.9 46 65.2
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 1.0e-08 65.1 276 22.8
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.0e-08 65.1 64 54.7
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.8e-08 63.2 66 50.0
MCO03G108 Micromonas commoda HOM05D006270 ORTHO05D007755 7.9e-06 55.5 177 29.9


User provided reference genes

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