Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.8e-62 241.9 134 100.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 4.1e-61 238.0 134 97.8
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.2e-60 236.5 134 97.0
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.7e-55 217.6 134 89.6
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.8e-54 215.3 134 88.8
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 4.8e-54 214.5 134 88.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.2e-52 209.9 133 88.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.5e-42 176.4 141 73.8
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.0e-40 170.2 141 70.9
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.2e-36 156.8 134 64.9
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.3e-35 153.3 133 67.7
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 5.0e-35 151.4 134 62.7
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 8.6e-35 150.6 134 63.4
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.2e-33 146.7 121 69.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 4.7e-33 144.8 134 61.2
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.6e-31 139.0 129 63.6
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.4e-31 138.7 138 60.9
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.4e-31 138.7 138 60.9
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.4e-31 138.7 124 64.5
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 3.4e-31 138.7 129 62.0
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.5e-31 137.5 127 62.2
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 9.8e-31 137.1 133 60.2
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.2e-30 136.0 113 68.1
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.9e-30 135.6 104 72.1
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.9e-30 135.6 128 64.8
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 4.9e-30 134.8 130 57.7
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 8.3e-30 134.0 129 61.2
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 8.3e-30 134.0 134 60.4
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 8.3e-30 134.0 134 59.7
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 8.3e-30 134.0 128 63.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.4e-29 133.3 130 58.5
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.2e-29 132.1 125 59.2
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 5.4e-29 131.3 120 63.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 5.4e-29 131.3 120 63.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 7.0e-29 131.0 135 55.6
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.2e-29 130.6 138 58.0
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.2e-28 130.2 124 56.5
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.0e-28 129.4 135 56.3
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 7.8e-28 127.5 124 56.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.0e-27 127.1 126 57.9
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.0e-27 127.1 134 57.5
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.0e-27 127.1 121 59.5
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.7e-27 126.3 119 61.3
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.7e-27 126.3 124 55.6
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.3e-27 125.9 126 56.3
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 3.9e-27 125.2 121 60.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.9e-27 125.2 110 65.5
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.9e-27 125.2 134 55.2
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.5e-26 123.2 121 57.9
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.5e-26 123.2 120 60.8
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.9e-26 122.9 134 55.2
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.5e-26 122.5 120 60.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 2.5e-26 122.5 126 57.9
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.5e-26 122.5 119 57.1
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 2.5e-26 122.5 135 53.3
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.3e-26 122.1 121 57.0
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.3e-26 121.7 125 55.2
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 5.6e-26 121.3 118 60.2
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 7.3e-26 120.9 119 59.7
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 7.3e-26 120.9 121 57.9
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 7.3e-26 120.9 121 57.9
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 7.3e-26 120.9 124 58.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 9.5e-26 120.6 95 66.3
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 9.5e-26 120.6 121 59.5
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.2e-25 120.2 124 52.4
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 1.6e-25 119.8 120 59.2
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.6e-25 119.8 119 57.1
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.6e-25 119.8 135 54.1
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.1e-25 119.4 120 55.8
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.1e-25 119.4 120 55.8
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.1e-25 119.4 120 55.8
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 2.8e-25 119.0 130 55.4
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 3.6e-25 118.6 126 54.0
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 3.6e-25 118.6 124 54.0
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 4.7e-25 118.2 120 59.2
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 6.2e-25 117.9 120 55.8
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 6.2e-25 117.9 120 55.8
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 8.1e-25 117.5 129 54.3
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 8.1e-25 117.5 134 54.5
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.1e-24 117.1 121 56.2
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.1e-24 117.1 121 56.2
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.1e-24 117.1 132 52.3
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.1e-24 117.1 121 53.7
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.8e-24 116.3 103 61.2
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.8e-24 116.3 128 52.3
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.3e-24 115.9 101 65.3
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.3e-24 115.9 109 61.5
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 5.2e-24 114.8 144 50.7
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.2e-23 113.6 128 54.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.5e-23 113.2 123 52.8
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.0e-23 112.8 129 53.5
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.6e-23 112.5 124 53.2
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 2.6e-23 112.5 142 51.4
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.6e-23 112.5 132 50.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 2.6e-23 112.5 118 55.1
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 5.8e-23 111.3 107 57.0
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 9.8e-23 110.5 123 52.0
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.4e-21 106.7 119 52.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.4e-21 105.9 134 46.3
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.1e-21 105.1 124 48.4
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.1e-20 102.8 129 48.8
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.0e-19 100.5 124 50.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.7e-19 99.8 125 49.6
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.0e-19 99.0 96 56.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 6.6e-19 97.8 130 45.4
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 8.6e-19 97.4 112 50.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.3e-18 95.5 73 69.9
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 3.3e-18 95.5 124 48.4
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.6e-18 94.7 130 44.6
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.3e-18 94.4 86 55.8
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 3.6e-17 92.0 89 59.6
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 8.1e-17 90.9 105 48.6
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.4e-16 90.1 100 55.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.0e-16 88.6 64 71.9
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.0e-15 86.3 64 71.9
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.7e-14 83.2 113 43.4
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.9e-13 79.7 118 46.6
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-13 77.4 99 44.4
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 4.6e-12 75.1 86 47.7
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 3.9e-11 72.0 110 40.0
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 8.6e-11 70.9 86 45.3
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.1e-10 70.5 83 47.0
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.0e-07 59.7 96 38.5
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.0e-07 59.7 117 35.0


User provided reference genes

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