Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 6.0e-177 624.0 306 100.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.6e-161 572.8 306 92.5
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 3.6e-161 571.6 306 92.2
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 4.5e-156 554.7 307 88.6
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.1e-146 523.5 341 77.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.0e-132 476.1 265 87.5
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.0e-128 462.2 302 73.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 9.2e-125 450.7 306 71.9
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 2.7e-124 449.1 306 71.6
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.3e-123 446.0 296 72.0
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 8.6e-123 444.1 294 71.8
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 2.5e-122 442.6 312 70.2
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 4.3e-122 441.8 306 69.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.8e-121 439.1 289 72.0
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 6.1e-121 438.0 295 69.2
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 8.0e-121 437.6 309 69.6
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.8e-120 436.4 306 68.6
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.8e-120 436.4 293 71.0
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 3.1e-120 435.6 289 71.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.0e-120 435.3 304 71.1
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 4.0e-120 435.3 315 69.8
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 6.8e-120 434.5 291 71.1
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.2e-119 433.7 300 68.7
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.2e-119 433.7 293 71.3
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.0e-119 433.0 289 71.6
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.0e-119 433.0 295 70.2
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 4.4e-119 431.8 290 71.7
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 5.8e-119 431.4 290 70.7
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.7e-118 429.9 302 68.9
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.2e-118 429.5 294 68.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.9e-118 429.1 292 69.9
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.7e-118 428.7 291 69.8
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.9e-118 428.3 289 70.2
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.4e-117 426.0 290 70.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 3.2e-117 425.6 295 68.8
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 3.2e-117 425.6 305 67.2
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 4.1e-117 425.2 274 74.5
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.2e-116 423.7 293 71.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.2e-116 423.7 293 70.0
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.7e-116 422.5 294 68.0
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.7e-116 422.5 289 68.9
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.6e-116 421.8 289 68.9
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 4.6e-116 421.8 292 68.8
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.0e-116 421.4 289 69.2
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 7.8e-116 421.0 289 69.2
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.0e-115 420.6 294 67.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 3.0e-115 419.1 290 69.0
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.0e-115 419.1 324 63.9
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 3.9e-115 418.7 305 65.9
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.9e-115 418.7 290 67.9
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 6.6e-115 417.9 294 67.3
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.9e-114 416.4 298 66.8
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.5e-114 416.0 296 67.6
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.5e-114 416.0 296 67.6
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.6e-113 413.3 289 68.5
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.6e-113 413.3 298 67.1
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 6.2e-113 411.4 363 60.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 3.1e-112 409.1 299 68.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 3.1e-112 409.1 306 66.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 3.1e-112 409.1 331 61.0
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 8.9e-112 407.5 287 67.2
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.0e-111 406.4 289 69.9
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 3.4e-111 405.6 295 66.8
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 3.4e-111 405.6 295 66.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 5.8e-111 404.8 307 64.8
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.7e-110 403.3 208 96.6
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 4.9e-110 401.7 305 64.6
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 4.9e-110 401.7 295 64.7
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.2e-109 399.1 279 69.9
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 7.0e-109 397.9 305 63.6
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 7.0e-109 397.9 300 64.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 3.5e-108 395.6 299 64.2
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.5e-108 395.6 308 64.6
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 6.0e-108 394.8 287 65.5
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 7.3e-106 387.9 297 64.0
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.2e-105 387.1 297 63.3
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 2.1e-105 386.3 303 63.7
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 3.6e-105 385.6 301 63.1
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 3.6e-105 385.6 288 68.1
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.1e-104 384.0 290 63.8
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.3e-104 382.9 298 62.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.0e-103 379.8 301 62.8
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 3.0e-99 365.9 271 65.3
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 8.1e-97 357.8 268 65.3
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.5e-95 353.6 291 61.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.4e-95 352.1 275 64.4
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.3e-94 350.5 287 60.3
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.7e-94 350.1 290 59.7
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.2e-94 349.7 283 62.2
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 6.6e-91 338.2 195 85.6
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-90 337.4 300 58.7
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.7e-89 332.0 224 71.0
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 5.8e-87 325.1 266 57.9
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-85 320.9 272 60.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 5.1e-83 312.0 293 57.0
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 4.3e-74 282.3 253 58.5
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.8e-72 276.9 389 39.8
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.3e-59 234.2 160 71.2
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 7.4e-58 228.4 146 73.3
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.4e-56 223.4 266 48.1
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.5e-53 213.4 150 67.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.8e-51 207.2 148 68.2
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.4e-45 187.6 135 64.4
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-43 181.4 253 43.9
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 2.2e-38 163.7 107 67.3
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.2e-38 163.7 108 70.4
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.5e-37 159.1 183 49.7
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.2e-37 158.7 183 49.7
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.3e-30 137.9 89 74.2
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 9.4e-29 131.7 82 75.6
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.0e-27 128.3 89 64.0
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 5.9e-23 112.5 66 74.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.5e-18 95.5 144 40.3
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.2e-17 94.0 57 77.2
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.5e-15 86.7 77 57.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.6e-10 70.5 80 48.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.6e-10 70.5 63 55.6
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.9e-09 67.0 45 66.7
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 5.4e-08 62.8 41 68.3
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.2e-07 61.6 81 40.7


User provided reference genes

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