Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 7.7e-49 196.8 99 100.0
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 2.3e-45 185.3 99 90.9
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 2.3e-45 185.3 102 92.2
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 2.3e-45 185.3 102 92.2
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.4e-44 181.4 102 90.2
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 4.4e-44 181.0 99 88.9
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 4.8e-43 177.6 101 86.1
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.1e-42 176.4 101 86.1
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 4.1e-42 174.5 101 82.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.2e-41 172.9 101 82.2
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.0e-40 169.9 102 79.4
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.3e-40 169.5 102 78.4
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.7e-40 169.1 99 85.9
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.9e-40 168.3 96 88.5
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.5e-39 165.2 103 82.5
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 3.2e-39 164.9 102 82.4
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.2e-39 164.5 102 83.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 5.5e-39 164.1 104 80.8
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 7.2e-39 163.7 103 79.6
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 9.5e-39 163.3 101 80.2
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.2e-38 162.9 104 80.8
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.1e-38 162.2 102 74.5
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 3.6e-38 161.4 102 80.4
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 4.7e-38 161.0 101 78.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.1e-38 160.6 102 78.4
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.1e-38 160.6 102 78.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.4e-37 159.5 104 80.8
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 2.3e-37 158.7 95 83.2
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.0e-37 158.3 100 78.0
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 4.0e-37 157.9 106 74.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 4.0e-37 157.9 95 78.9
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 4.0e-37 157.9 95 78.9
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 5.2e-37 157.5 96 76.0
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.2e-37 157.5 104 78.8
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 8.8e-37 156.8 102 78.4
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 8.8e-37 156.8 96 78.1
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 8.8e-37 156.8 101 79.2
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.2e-36 156.4 98 78.6
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 1.2e-36 156.4 100 78.0
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 2.0e-36 155.6 102 78.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 2.0e-36 155.6 102 78.4
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.6e-36 155.2 102 76.5
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.6e-36 155.2 107 72.0
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 2.6e-36 155.2 102 77.5
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.7e-36 154.1 102 79.4
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 9.8e-36 153.3 102 77.5
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 6.3e-35 150.6 107 75.7
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 8.3e-35 150.2 107 75.7
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.1e-34 149.8 112 68.8
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.1e-34 149.8 112 68.8
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.8e-34 149.1 98 76.5
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 3.1e-34 148.3 102 75.5
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 3.1e-34 148.3 101 73.3
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.6e-33 146.0 97 77.3
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 2.0e-33 145.6 103 72.8
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.5e-33 144.8 97 74.2
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.5e-33 144.8 110 70.0
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 5.9e-33 144.1 94 76.6
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 5.9e-33 144.1 102 73.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 7.8e-33 143.7 96 79.2
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.0e-32 143.3 106 72.6
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.3e-32 142.9 103 68.9
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.3e-32 142.9 91 78.0
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.7e-32 142.5 99 71.7
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 5.0e-32 141.0 112 67.9
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.1e-31 139.8 106 71.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.1e-31 139.8 113 66.4
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.1e-31 139.8 109 68.8
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.1e-31 139.8 109 71.6
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.9e-31 139.0 84 81.0
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 3.3e-31 138.3 106 67.9
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 4.3e-31 137.9 103 73.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 4.3e-31 137.9 103 73.8
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 7.3e-31 137.1 113 68.1
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 7.3e-31 137.1 113 68.1
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 9.5e-31 136.7 114 67.5
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 9.5e-31 136.7 106 71.7
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.6e-30 136.0 108 65.7
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 2.8e-30 135.2 115 66.1
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 3.6e-30 134.8 111 65.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 3.6e-30 134.8 94 73.4
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 2.3e-29 132.1 114 63.2
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 6.8e-29 130.6 111 64.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 6.8e-29 130.6 106 68.9
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 8.9e-29 130.2 111 61.3
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 1.5e-28 129.4 109 64.2
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 2.0e-28 129.0 111 64.9
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 2.0e-28 129.0 98 60.2
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 2.6e-28 128.6 83 73.5
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 3.4e-28 128.3 107 67.3
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 3.4e-28 128.3 107 67.3
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 7.5e-28 127.1 116 60.3
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.3e-27 126.3 86 74.4
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.9e-27 125.2 101 63.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 2.9e-27 125.2 89 74.2
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 9.2e-26 120.2 112 63.4
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 9.2e-26 120.2 89 70.8
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 9.2e-26 120.2 109 61.5
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.6e-25 119.4 114 58.8
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.6e-25 119.4 101 64.4
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.0e-25 119.0 106 62.3
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 2.0e-25 119.0 113 55.8
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.7e-25 118.6 107 62.6
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 4.6e-25 117.9 114 60.5
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 1.0e-24 116.7 109 58.7
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 3.9e-24 114.8 113 58.4
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.1e-23 113.2 64 90.6
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.2e-22 109.8 87 69.0
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 3.6e-22 108.2 103 57.3
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 4.0e-21 104.8 78 71.8
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 9.8e-20 100.1 91 59.3
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 1.0e-16 90.1 86 60.5
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.3e-16 89.7 69 72.5
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 5.0e-16 87.8 82 62.2
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 6.6e-16 87.4 56 82.1
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 4.0e-13 78.2 115 40.9
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 3.7e-11 71.6 101 44.6
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 4.9e-11 71.2 55 74.5
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 2.4e-10 68.9 50 74.0
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.3e-08 63.2 103 40.8
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 5.1e-08 61.2 102 40.2


User provided reference genes

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