Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400013382 Solanum tuberosum HOM05D008744 ORTHO05D010647 3.3e-109 398.3 185 100.0
Solyc03g005110.3 Solanum lycopersicum HOM05D008744 ORTHO05D010647 5.4e-88 327.8 186 83.3
Sopen03g001120 Solanum pennellii HOM05D008744 ORTHO05D010647 4.7e-84 314.7 186 82.3
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 3.9e-46 188.7 153 60.1
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 2.5e-40 169.5 188 49.5
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.0e-38 164.1 156 54.5
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 3.0e-38 162.5 200 47.5
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 2.6e-37 159.5 183 48.6
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.4e-35 153.7 119 63.9
Nitab4.5_0000078g0430 Nicotiana tabacum HOM05D008744 ORTHO05D010647 9.1e-35 151.0 181 48.1
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 6.5e-33 144.8 143 51.7
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 1.4e-32 143.7 192 44.8
Peaxi162Scf01013g00008 Petunia axillaris HOM05D008744 ORTHO05D010647 3.9e-30 135.6 129 50.4
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 9.7e-29 131.0 140 46.4
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 1.4e-27 127.1 123 48.0
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 7.7e-26 121.3 140 47.9
Peaxi162Scf00700g00244 Petunia axillaris HOM05D008744 ORTHO05D010647 7.7e-26 121.3 148 50.7
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.0e-25 120.9 140 47.1
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.7e-23 112.1 193 38.3
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 1.4e-22 110.5 160 41.9
Peaxi162Scf00270g00516 Petunia axillaris HOM05D008744 ORTHO05D010647 7.5e-21 104.8 165 38.2
Nitab4.5_0005672g0020 Nicotiana tabacum HOM05D008744 ORTHO05D010647 9.1e-19 97.8 115 46.1
Solyc09g010740.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.6e-18 97.1 134 43.3
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.7e-18 96.3 174 32.2
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 5.9e-18 95.1 174 32.8
Sopen06g026860 Solanum pennellii HOM05D008744 ORTHO05D010647 1.3e-17 94.0 158 35.4
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.2e-17 93.2 175 34.3
Nitab4.5_0014775g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 6.5e-17 91.7 110 43.6
Sopen06g027470 Solanum pennellii HOM05D008744 ORTHO05D010647 6.5e-17 91.7 183 32.2
Nitab4.5_0006819g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.5e-16 90.5 191 37.2
Nitab4.5_0008949g0050 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.6e-15 85.9 91 49.5
Nitab4.5_0000078g0410 Nicotiana tabacum HOM05D008744 ORTHO05D010647 8.0e-15 84.7 90 54.4
Solyc06g069565.2 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.0e-14 84.3 123 37.4
Nitab4.5_0004942g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.6e-13 79.7 96 50.0
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 3.7e-12 75.9 169 29.0
Sopen04g016220 Solanum pennellii HOM05D008744 ORTHO05D010647 8.3e-12 74.7 89 44.9
Sopen09g030970 Solanum pennellii HOM05D008744 ORTHO05D010647 1.8e-11 73.6 107 36.4
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 9.1e-11 71.2 148 30.4
Sopen04g016250 Solanum pennellii HOM05D008744 ORTHO05D010647 2.7e-10 69.7 75 49.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.8e-09 65.9 147 31.3
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 5.0e-09 65.5 146 30.1
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 8.6e-09 64.7 131 32.8
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-08 63.9 105 33.3
Nitab4.5_0003217g0050 Nicotiana tabacum HOM05D008744 ORTHO05D015557 2.5e-08 63.2 94 30.9
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.2e-07 60.8 125 31.2
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 1.2e-07 60.8 144 27.1
BcaC06g35071 Brassica carinata HOM05D002679 ORTHO05D010703 2.8e-07 59.7 109 30.3
BcaB03g14127 Brassica carinata HOM05D002679 ORTHO05D010703 3.6e-07 59.3 109 33.0
Sopen08g001170 Solanum pennellii HOM05D010354 ORTHO05D012840 3.6e-07 59.3 123 31.7
Solyc09g082090.1 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.0e-06 57.8 85 34.1
Peaxi162Scf00191g00113 Petunia axillaris HOM05D008667 ORTHO05D010850 1.4e-06 57.4 96 29.2
Nitab4.5_0000043g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.8e-06 57.0 93 35.5
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.8e-06 57.0 124 31.5
Cc02_g14140 Coffea canephora HOM05D039367 ORTHO05D044651 2.3e-06 56.6 199 29.1
Cc02_g14170 Coffea canephora HOM05D039367 ORTHO05D044651 2.3e-06 56.6 199 29.1
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.0e-06 56.2 109 35.8
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 4.0e-06 55.8 190 32.1
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 4.0e-06 55.8 135 31.1
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 4.0e-06 55.8 157 27.4
AT3G19520 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 5.2e-06 55.5 126 33.3
PGSC0003DMG400006633 Solanum tuberosum HOM05D010354 ORTHO05D012840 5.2e-06 55.5 141 28.4
CAN.G128.123 Capsicum annuum HOM05D001907 ORTHO05D015557 6.8e-06 55.1 181 27.6
CAN.G3720.1 Capsicum annuum HOM05D010354 ORTHO05D015557 6.8e-06 55.1 181 27.6
CAN.G128.119 Capsicum annuum HOM05D001907 ORTHO05D015557 8.8e-06 54.7 181 27.6
CAN.G128.124 Capsicum annuum HOM05D001907 ORTHO05D015557 8.8e-06 54.7 181 27.6


User provided reference genes

Program Settings