Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 9.6e-113 410.2 213 100.0
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.6e-94 349.0 214 86.9
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 4.9e-93 344.7 214 86.0
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 7.2e-60 234.6 221 62.9
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.7e-57 224.9 216 64.4
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 9.1e-55 217.6 211 64.5
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 7.0e-47 191.4 380 39.5
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.7e-46 189.5 218 54.6
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 3.5e-46 189.1 219 54.3
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 3.2e-44 182.6 227 50.2
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 1.3e-40 170.6 214 50.9
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.2e-40 169.9 233 51.1
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.2e-40 169.9 233 51.1
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 2.8e-40 169.5 211 51.2
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 6.3e-40 168.3 211 51.7
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 8.3e-40 167.9 222 50.9
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 4.1e-39 165.6 250 49.2
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 7.0e-39 164.9 228 49.6
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 3.8e-37 159.1 243 44.0
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 5.0e-37 158.7 235 47.2
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 6.5e-37 158.3 211 49.8
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 8.5e-37 157.9 237 48.9
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 1.9e-36 156.8 239 48.1
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.2e-36 156.0 237 46.0
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 5.5e-36 155.2 222 48.6
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 5.5e-36 155.2 234 47.4
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 7.2e-36 154.8 210 46.7
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 9.4e-36 154.5 230 47.4
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.6e-35 153.7 263 44.1
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 2.7e-35 152.9 213 49.3
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 3.6e-35 152.5 213 46.9
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 4.7e-35 152.1 209 49.3
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 4.7e-35 152.1 199 48.2
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 6.1e-35 151.8 221 47.5
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 6.1e-35 151.8 229 45.9
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 1.4e-34 150.6 234 47.9
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 3.0e-34 149.4 211 45.5
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 3.0e-34 149.4 215 46.0
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 5.2e-34 148.7 253 42.7
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 6.8e-34 148.3 211 46.4
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 6.8e-34 148.3 211 46.4
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 8.8e-34 147.9 223 47.1
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 8.8e-34 147.9 235 46.8
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.2e-33 147.5 259 45.6
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.5e-33 147.1 212 46.7
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.5e-33 147.1 213 45.5
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 1.5e-33 147.1 224 44.6
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 2.0e-33 146.7 211 46.0
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 4.4e-33 145.6 210 46.2
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 4.4e-33 145.6 261 44.4
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 1.3e-32 144.1 213 43.2
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 1.3e-32 144.1 244 42.2
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.3e-32 144.1 218 45.9
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 1.3e-32 144.1 232 44.4
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 2.2e-32 143.3 228 43.0
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 2.2e-32 143.3 236 42.4
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 2.8e-32 142.9 236 43.6
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 1.4e-31 140.6 174 52.9
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 1.8e-31 140.2 234 45.3
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 1.8e-31 140.2 230 43.9
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.4e-31 139.8 228 43.4
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 5.4e-31 138.7 220 42.7
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 7.0e-31 138.3 218 44.5
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 9.2e-31 137.9 226 45.6
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 1.2e-30 137.5 220 41.8
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 1.2e-30 137.5 246 41.1
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.0e-30 136.7 227 43.2
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 3.5e-30 136.0 234 42.3
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 4.5e-30 135.6 234 44.0
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 4.5e-30 135.6 214 43.5
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 5.9e-30 135.2 216 41.7
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 7.7e-30 134.8 230 40.9
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 7.7e-30 134.8 238 40.3
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.0e-29 134.4 225 43.6
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 1.3e-29 134.0 221 44.3
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 3.8e-29 132.5 213 42.3
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 3.8e-29 132.5 197 47.2
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 8.6e-29 131.3 210 42.4
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 1.1e-28 131.0 84 76.2
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 1.5e-28 130.6 229 41.5
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 1.5e-28 130.6 232 40.9
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.9e-28 130.2 240 42.5
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 4.3e-28 129.0 244 39.3
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 5.6e-28 128.6 213 42.3
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 5.6e-28 128.6 213 43.2
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 5.6e-28 128.6 82 75.6
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 7.3e-28 128.3 211 45.5
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 9.5e-28 127.9 213 43.2
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 9.5e-28 127.9 213 42.3
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 9.5e-28 127.9 246 41.5
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 1.2e-27 127.5 257 37.7
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 1.6e-27 127.1 207 42.5
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 1.6e-27 127.1 237 41.8
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 1.6e-27 127.1 224 41.5
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 2.1e-27 126.7 83 77.1
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 2.1e-27 126.7 248 40.7
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 2.8e-27 126.3 257 37.0
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 2.8e-27 126.3 225 41.3
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 2.8e-27 126.3 200 44.0
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.6e-27 125.9 226 43.4
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 4.7e-27 125.6 256 41.0
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 4.7e-27 125.6 211 42.2
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 4.7e-27 125.6 109 64.2
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 4.7e-27 125.6 171 48.0
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 8.0e-27 124.8 217 41.0
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.4e-26 124.0 212 41.0
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.4e-26 124.0 212 41.0
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 2.3e-26 123.2 274 38.7
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 4.0e-26 122.5 140 50.7
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 4.0e-26 122.5 242 39.3
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 5.2e-26 122.1 162 48.8
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 5.2e-26 122.1 231 41.1
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 8.9e-26 121.3 225 40.0
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 2.6e-25 119.8 214 43.0
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.6e-25 119.8 181 43.6
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 7.5e-25 118.2 72 76.4
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 1.7e-24 117.1 129 50.4
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 2.9e-24 116.3 77 70.1
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 6.4e-24 115.2 211 39.8
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 1.4e-23 114.0 121 56.2
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.8e-23 113.6 235 39.1
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 3.2e-23 112.8 118 55.9
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 4.1e-23 112.5 213 42.3
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 4.1e-23 112.5 213 42.3
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 4.1e-23 112.5 205 41.5
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 7.0e-23 111.7 265 36.6
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 9.2e-23 111.3 191 40.8
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 1.2e-22 110.9 221 39.4
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.6e-22 110.5 195 41.0
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.3e-21 107.5 222 40.5
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 2.3e-21 106.7 242 37.2
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 4.3e-20 102.4 221 35.7
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 6.2e-19 98.6 67 73.1
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 1.0e-18 97.8 232 34.5
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 9.8e-17 91.3 210 36.7
Nitab4.5_0000893g0100 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.3e-16 90.9 109 56.0
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.7e-16 90.5 80 58.8
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.9e-16 89.7 128 45.3
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.9e-16 89.0 188 38.8
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.3e-13 80.1 93 48.4
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.3e-13 80.1 126 42.1
Cpa.g.sc34.169 Carica papaya HOM05D004801 ORTHO05D005747 6.8e-10 68.6 161 35.4
AT1G52270 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 2.7e-06 56.6 156 31.4
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 6.0e-06 55.5 167 32.9


User provided reference genes

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