Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 0.0e+00 1574.3 864 100.0
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 0.0e+00 1490.3 864 95.5
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 0.0e+00 1479.5 864 95.0
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 0.0e+00 1355.5 827 89.7
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 0.0e+00 1323.9 872 86.8
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 0.0e+00 1230.3 833 85.4
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 8.7e-298 1026.9 867 71.4
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 9.7e-297 1023.5 873 66.8
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 5.0e-285 984.6 871 64.8
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 3.3e-281 971.8 872 63.0
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 4.5e-278 961.4 876 62.9
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.1e-268 930.2 834 65.2
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.8e-266 922.9 885 60.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 8.8e-266 920.6 877 62.0
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.8e-261 905.2 887 60.4
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.2e-260 902.1 887 60.4
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 1.4e-258 896.7 884 60.5
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.0e-257 892.9 894 58.7
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.9e-253 879.0 886 60.6
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 2.9e-253 879.0 878 61.3
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 8.6e-253 877.5 883 60.0
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.6e-252 874.8 887 58.4
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.8e-251 872.5 887 58.3
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.3e-250 869.4 890 58.8
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 8.9e-250 867.5 876 58.6
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.7e-248 863.2 884 58.4
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 2.0e-246 856.3 880 59.0
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 3.9e-245 852.0 877 57.6
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 2.1e-243 846.3 880 58.4
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 8.0e-243 844.3 836 61.0
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 1.8e-242 843.2 879 60.5
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 2.9e-240 835.9 880 59.4
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.6e-238 830.1 892 58.0
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 7.8e-238 827.8 860 58.0
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 8.6e-237 824.3 885 57.9
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-236 823.5 892 57.5
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.9e-236 823.2 759 64.4
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 4.3e-236 822.0 886 57.0
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.8e-235 819.3 889 57.7
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 1.5e-233 813.5 879 55.9
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 4.4e-233 812.0 877 59.3
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 4.4e-233 812.0 892 55.7
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 6.4e-232 808.1 885 57.3
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 1.9e-231 806.6 879 58.0
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.8e-227 792.7 887 56.0
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.4e-226 790.4 887 57.4
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.8e-226 790.0 892 56.1
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.3e-226 789.6 881 54.9
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 5.2e-226 788.5 892 55.9
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 6.8e-226 788.1 881 54.6
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.7e-224 783.5 881 53.8
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.1e-218 762.7 886 55.4
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 5.2e-218 761.9 846 56.9
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 1.2e-217 760.8 876 55.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.2e-217 760.8 881 57.4
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 7.1e-215 751.5 880 57.7
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 1.3e-213 747.3 882 56.0
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.7e-213 746.9 879 50.9
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.0e-213 746.1 885 54.0
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 1.9e-212 743.4 883 54.0
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 8.1e-211 738.0 835 56.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 3.1e-210 736.1 881 54.3
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 4.0e-210 735.7 886 53.8
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 4.0e-210 735.7 834 57.3
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.2e-209 734.2 789 57.9
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 1.5e-209 733.8 901 55.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 1.3e-208 730.7 901 55.3
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.7e-208 730.3 882 54.8
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.2e-208 729.9 845 54.7
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 3.8e-208 729.2 882 54.5
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.9e-207 726.9 898 52.3
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.2e-206 724.2 882 54.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.2e-206 724.2 879 57.6
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.5e-206 722.6 882 54.5
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.8e-205 720.3 865 55.0
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 3.9e-205 719.2 880 54.0
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.1e-205 718.8 881 54.0
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 2.5e-204 716.5 879 53.8
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.3e-203 714.1 883 53.7
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 4.0e-202 709.1 881 50.6
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.5e-201 707.2 798 57.6
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.5e-201 707.2 896 50.6
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 2.0e-201 706.8 896 51.8
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 2.6e-201 706.4 798 57.6
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 7.6e-201 704.9 887 53.9
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.8e-200 702.6 892 51.9
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 6.4e-200 701.8 896 51.8
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 8.4e-200 701.4 888 52.9
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 4.6e-198 695.7 846 52.2
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.3e-197 694.1 890 53.9
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.0e-197 693.0 881 51.6
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 8.7e-197 691.4 883 52.7
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 9.6e-196 688.0 846 54.3
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 1.3e-195 687.6 889 51.1
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 8.2e-195 684.9 898 51.4
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.2e-193 681.0 827 53.9
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.0e-192 677.9 831 49.2
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.3e-192 677.6 895 50.7
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 4.9e-192 675.6 877 51.9
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 2.1e-190 670.2 905 52.4
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.6e-190 669.1 873 49.6
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 7.9e-190 668.3 846 52.7
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.3e-187 661.0 884 51.9
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 2.4e-186 656.8 885 50.4
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 4.1e-186 656.0 890 48.4
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 5.3e-186 655.6 854 53.2
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.2e-185 654.4 884 52.3
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 2.6e-185 653.3 911 49.6
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 4.5e-185 652.5 869 49.7
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 4.2e-183 646.0 868 53.1
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 8.7e-181 638.3 884 50.1
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 1.1e-180 637.9 892 49.6
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.3e-179 632.1 880 50.9
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 2.1e-166 590.5 843 48.9
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.4e-165 587.8 872 48.3
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.7e-163 580.9 876 45.4
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 8.2e-163 578.6 870 47.4
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.1e-162 576.6 872 48.5
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.7e-160 570.9 868 48.3
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.1e-159 568.2 777 46.5
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.5e-159 567.0 876 44.1
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 4.0e-157 559.7 805 50.7
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.0e-156 557.4 876 44.3
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 2.6e-156 557.0 883 46.1
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.8e-155 552.7 839 46.8
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 2.0e-153 547.4 886 46.0
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 7.7e-153 545.4 886 46.3
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 2.5e-151 540.4 728 52.7
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 1.8e-146 524.2 889 43.8
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 4.1e-146 523.1 715 52.3
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 1.3e-144 518.1 833 44.8
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 2.8e-142 510.4 842 45.4
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 1.0e-141 508.4 842 47.1
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 5.7e-140 502.7 846 46.6
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 5.7e-140 502.7 887 42.7
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 9.8e-140 501.9 845 46.7
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-139 501.5 832 45.4
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.7e-139 501.1 842 46.2
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 2.2e-139 500.7 875 44.9
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.4e-138 498.0 844 46.6
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 2.3e-136 490.7 854 45.1
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 3.0e-133 480.3 846 45.2
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.7e-131 474.6 879 45.5
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 2.7e-129 467.2 857 44.5
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 6.0e-129 466.1 860 44.1
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 2.3e-128 464.2 835 42.8
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 4.7e-126 456.4 759 42.8
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.3e-123 448.4 753 45.3
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 3.3e-119 433.7 767 45.2
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 5.8e-116 422.9 725 46.3
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 3.7e-115 420.2 731 46.5
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.4e-101 375.2 437 57.2
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 6.9e-101 372.9 642 50.6
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.1e-98 365.5 276 68.1
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 1.3e-94 352.1 892 37.4
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.6e-94 351.7 898 38.8
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.3e-88 332.0 886 36.3
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.9e-87 328.2 863 36.7
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 5.8e-84 316.6 722 38.6
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 3.8e-83 313.9 876 36.0
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 4.2e-82 310.5 887 37.8
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 4.6e-81 307.0 887 37.5
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.3e-79 300.8 870 34.9
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 4.5e-68 263.8 353 45.6
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.8e-67 260.8 822 36.1
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-66 259.2 500 39.4
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.9e-66 258.5 228 63.6
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.1e-65 255.0 978 33.2
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.4e-60 237.7 404 46.8
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 4.7e-57 227.3 331 43.8
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.9e-56 224.2 299 45.2
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.8e-53 215.3 337 42.7
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.5e-51 206.5 282 43.6
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 1.3e-46 192.6 299 40.5
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 1.3e-43 182.6 313 39.9
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.0e-40 172.9 160 54.4
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.0e-40 172.9 275 41.1
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.9e-34 152.1 288 37.2
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.4e-32 146.0 81 90.1
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 9.8e-31 139.8 345 35.7
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 4.8e-30 137.5 292 52.7
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 8.3e-30 136.7 165 49.1
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 9.2e-13 80.1 158 36.7


User provided reference genes

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