Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.4e-88 328.9 180 100.0
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.3e-70 270.0 182 80.8
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.4e-69 266.5 183 83.6
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 2.1e-68 262.7 185 83.8
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 1.5e-66 256.5 190 78.4
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 4.3e-66 255.0 189 75.7
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.8e-59 233.0 178 74.7
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 9.7e-58 227.3 184 71.7
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.7e-57 226.5 182 73.6
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 7.7e-55 217.6 180 70.6
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 5.0e-54 214.9 178 66.9
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.2e-53 211.8 181 71.3
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 1.0e-51 207.2 250 52.8
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 8.8e-51 204.1 180 66.1
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 1.7e-49 199.9 186 65.6
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 8.2e-49 197.6 166 69.9
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 1.1e-48 197.2 203 57.6
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 8.8e-27 124.4 175 49.7
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 9.2e-24 114.4 185 43.8
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 3.8e-22 109.0 181 45.3
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 3.3e-21 105.9 168 47.6
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.2e-18 97.4 183 43.2
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 5.4e-16 88.6 182 37.9
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 2.7e-15 86.3 174 36.8
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 3.5e-15 85.9 182 38.5
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 5.0e-14 82.0 174 40.2
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 5.6e-13 78.6 187 36.9
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 3.6e-12 75.9 168 37.5
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 6.2e-12 75.1 173 34.1
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 8.0e-12 74.7 172 33.1
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.1e-11 74.3 175 36.0
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.4e-11 73.9 172 32.0
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 1.8e-11 73.6 194 32.0
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 3.1e-11 72.8 172 33.7
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 4.0e-11 72.4 172 35.5
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 5.2e-11 72.0 172 33.1
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 5.2e-11 72.0 172 30.8
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 2.0e-10 70.1 185 31.9
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.6e-10 69.7 172 30.8
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 2.6e-10 69.7 176 31.8
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 3.4e-10 69.3 173 33.5
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.4e-10 69.3 173 35.8
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 4.4e-10 68.9 176 34.1
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 4.4e-10 68.9 172 33.7
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 5.8e-10 68.6 172 30.8
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 5.8e-10 68.6 172 33.7
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 5.8e-10 68.6 176 32.4
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 9.8e-10 67.8 173 32.9
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 2.2e-09 66.6 82 45.1
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.2e-09 66.6 180 31.1
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.2e-09 66.6 180 31.1
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.2e-09 66.6 172 32.0
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 2.9e-09 66.2 180 30.6
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.9e-09 66.2 180 30.6
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 3.7e-09 65.9 175 32.6
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.7e-09 65.9 172 32.0
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.7e-09 65.9 173 35.8
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 4.9e-09 65.5 164 34.1
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 6.4e-09 65.1 184 29.9
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 6.4e-09 65.1 74 45.9
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.1e-08 64.3 202 35.6
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 3.2e-08 62.8 181 30.4
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 7.0e-08 61.6 172 30.8
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 9.2e-08 61.2 172 30.2
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 9.2e-08 61.2 181 32.6
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 1.6e-07 60.5 175 30.3
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.6e-07 60.5 180 27.8
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 1.6e-07 60.5 183 31.7
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 2.0e-07 60.1 178 30.3
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 3.5e-07 59.3 79 45.6
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 6.0e-07 58.5 181 30.9
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.3e-06 56.6 75 45.3
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.3e-06 56.6 176 29.5
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 3.0e-06 56.2 78 39.7
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.9e-06 55.8 103 31.1
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 5.0e-06 55.5 74 47.3
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 5.0e-06 55.5 96 33.3
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 8.6e-06 54.7 169 32.5


User provided reference genes

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