Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 5.1e-215 750.7 361 100.0
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.3e-202 709.5 361 95.3
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 2.9e-202 708.4 361 94.7
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 6.4e-202 707.2 361 94.2
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.4e-201 705.3 361 92.5
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.1e-192 675.6 361 88.1
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.1e-190 669.8 361 87.5
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.5e-190 669.5 361 86.1
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.5e-190 669.5 361 86.7
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 7.3e-190 667.2 361 86.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.6e-189 666.0 361 85.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.8e-189 665.2 359 86.4
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 3.6e-189 664.8 361 86.4
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 4.8e-189 664.5 361 86.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 6.2e-189 664.1 361 85.9
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 85.6
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 3.1e-188 661.8 359 85.5
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 6.9e-188 660.6 357 86.6
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 84.2
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 85.3
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.5e-187 659.4 361 85.6
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 4.5e-187 657.9 361 85.0
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 4.5e-187 657.9 361 85.0
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 85.3
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 7.6e-187 657.1 361 84.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-186 656.4 358 85.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.3e-186 656.4 361 85.3
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.2e-186 655.6 361 85.6
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 2.2e-186 655.6 361 85.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 2.9e-186 655.2 358 85.2
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 2.9e-186 655.2 361 84.5
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 3.8e-186 654.8 359 84.4
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 3.8e-186 654.8 362 85.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 8.4e-186 653.7 361 84.8
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 2.4e-185 652.1 361 82.8
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 7.1e-185 650.6 361 83.9
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.2e-184 649.8 361 82.5
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.1e-184 649.0 361 83.7
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.7e-184 648.7 361 83.7
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 3.5e-184 648.3 361 83.1
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 3.0e-183 645.2 359 84.7
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 5.1e-183 644.4 361 83.7
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 5.1e-183 644.4 361 83.7
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.1e-182 643.3 361 83.1
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.5e-182 642.9 361 84.5
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.5e-182 642.9 371 82.5
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 9.6e-182 640.2 387 78.6
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 9.6e-182 640.2 361 82.8
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 2.1e-181 639.0 358 82.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 8.1e-181 637.1 361 83.1
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 82.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 83.8
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 1.1e-180 636.7 360 82.8
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 3.1e-180 635.2 358 83.2
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 6.9e-180 634.0 360 83.1
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 9.0e-180 633.6 360 83.1
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 9.0e-180 633.6 360 83.1
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.5e-179 632.9 357 83.2
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.0e-179 632.5 360 82.8
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 4.5e-179 631.3 360 82.5
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 2.2e-178 629.0 396 76.5
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.9e-178 627.9 360 82.5
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 6.5e-178 627.5 361 80.9
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.2e-177 625.2 360 82.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 9.3e-177 623.6 359 79.4
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 6.0e-176 620.9 359 79.9
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.3e-175 619.8 428 71.0
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-175 619.4 401 75.3
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 2.3e-175 619.0 361 80.3
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 3.0e-175 618.6 417 72.9
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 3.0e-175 618.6 359 79.9
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 5.1e-175 617.8 359 78.8
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.5e-174 616.3 360 81.9
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.9e-174 615.9 341 83.6
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 9.6e-174 613.6 359 79.9
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.1e-172 610.1 387 74.4
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.1e-172 610.1 359 78.0
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 4.1e-172 608.2 359 78.0
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 4.1e-172 608.2 359 78.0
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 4.1e-172 608.2 359 78.0
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 5.3e-172 607.8 359 77.7
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 9.0e-172 607.1 361 81.7
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 3.8e-170 601.7 357 77.6
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 2.5e-169 599.0 357 79.0
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 9.3e-169 597.0 357 77.9
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 9.3e-169 597.0 359 78.8
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 3.5e-168 595.1 358 76.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 4.6e-168 594.7 359 76.6
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 7.9e-168 594.0 359 76.6
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.8e-167 592.8 359 76.3
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.3e-167 592.4 361 76.2
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 6.7e-167 590.9 361 75.9
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 8.5e-162 573.9 314 85.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.2e-161 572.0 357 75.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 3.2e-161 572.0 366 73.0
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.6e-160 569.7 366 72.1
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 5.9e-155 551.2 302 86.8
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 9.4e-153 543.9 336 75.3
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 4.7e-152 541.6 314 82.2
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-151 540.0 306 83.3
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 5.2e-143 511.5 403 64.0
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 8.8e-143 510.8 357 67.5
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.6e-142 509.2 357 68.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 3.3e-142 508.8 358 67.6
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 9.1e-140 500.7 352 71.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.1e-137 493.8 358 65.9
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 9.4e-137 490.7 361 69.5
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.4e-127 460.3 252 86.1
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.2e-127 458.4 365 64.7
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 3.7e-125 452.2 240 89.2
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 4.9e-125 451.8 368 61.4
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 3.6e-112 409.1 238 82.4
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 7.8e-107 391.3 211 85.8
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.6e-99 367.1 205 83.4
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 6.0e-75 285.4 190 74.2
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.1e-63 246.5 152 73.7
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.5e-59 233.0 161 68.9
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 9.0e-55 218.4 119 79.8
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.0e-53 214.9 126 77.8
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.8e-47 194.1 207 51.7
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 4.1e-47 193.0 379 36.1
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 4.8e-40 169.5 98 83.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.0e-33 147.5 98 75.5
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 3.3e-25 120.2 59 89.8
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 3.1e-23 113.6 111 54.1
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.5e-20 104.0 79 68.4
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 3.7e-16 90.1 51 74.5
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.7e-13 81.3 166 35.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 3.8e-13 80.1 37 89.2
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.4e-07 61.6 275 25.5


User provided reference genes

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