Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.5e-65 251.5 130 100.0
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 1.3e-56 223.0 131 90.8
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 9.5e-47 190.3 133 79.7
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.3e-45 185.7 130 76.9
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.1e-45 185.3 128 75.8
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 8.9e-45 183.7 128 78.9
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 8.9e-45 183.7 128 78.9
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 9.8e-44 180.3 123 79.7
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 3.3e-39 165.2 131 72.5
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 2.0e-36 156.0 133 66.2
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 5.8e-36 154.5 131 67.2
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 3.7e-35 151.8 130 68.5
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 1.4e-34 149.8 133 65.4
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 5.4e-34 147.9 128 64.1
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 9.2e-34 147.1 134 64.9
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 1.2e-33 146.7 134 64.9
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 1.6e-33 146.4 130 65.4
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 2.1e-33 146.0 130 61.5
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.1e-33 146.0 130 58.5
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 2.7e-33 145.6 131 61.1
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 2.7e-33 145.6 128 62.5
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 2.7e-33 145.6 131 60.3
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.5e-33 145.2 130 64.6
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 3.5e-33 145.2 133 64.7
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 4.6e-33 144.8 130 66.9
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 4.6e-33 144.8 128 62.5
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 6.0e-33 144.4 130 58.5
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 7.8e-33 144.1 130 65.4
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.7e-32 142.9 128 64.1
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 3.9e-32 141.7 132 62.1
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 3.9e-32 141.7 128 62.5
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 5.1e-32 141.4 133 55.6
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 6.6e-32 141.0 130 62.3
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 6.6e-32 141.0 133 57.9
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 8.6e-32 140.6 131 62.6
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-31 140.2 130 57.7
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.9e-31 139.4 130 59.2
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 2.5e-31 139.0 131 63.4
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 3.3e-31 138.7 131 61.8
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 4.3e-31 138.3 129 62.0
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 4.3e-31 138.3 130 60.8
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 7.3e-31 137.5 128 60.2
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 7.3e-31 137.5 132 63.6
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.2e-30 136.7 128 60.9
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.2e-30 136.7 128 60.9
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.2e-30 136.7 132 63.6
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 1.2e-30 136.7 135 61.5
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 1.6e-30 136.3 129 62.0
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 1.6e-30 136.3 130 60.8
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.6e-30 136.3 130 63.1
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 2.1e-30 136.0 131 61.8
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 2.1e-30 136.0 131 61.8
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 2.8e-30 135.6 136 57.4
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 3.6e-30 135.2 130 61.5
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 4.7e-30 134.8 130 56.2
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 4.7e-30 134.8 134 57.5
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 1.4e-29 133.3 130 60.8
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 1.4e-29 133.3 133 58.6
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 1.8e-29 132.9 130 60.0
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 2.3e-29 132.5 129 59.7
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 3.1e-29 132.1 130 60.8
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 4.0e-29 131.7 130 56.2
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 5.2e-29 131.3 128 57.0
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 5.2e-29 131.3 134 53.7
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 8.9e-29 130.6 119 58.0
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 8.9e-29 130.6 131 58.0
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.2e-28 130.2 130 59.2
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 1.5e-28 129.8 129 57.4
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.5e-28 129.8 134 51.5
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 2.6e-28 129.0 124 55.6
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 2.6e-28 129.0 130 56.9
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 2.6e-28 129.0 117 62.4
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 2.6e-28 129.0 117 61.5
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.4e-28 128.6 128 58.6
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 3.4e-28 128.6 125 59.2
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 3.4e-28 128.6 129 58.9
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 4.4e-28 128.3 124 54.8
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 4.4e-28 128.3 124 54.8
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 5.8e-28 127.9 128 56.2
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 7.5e-28 127.5 124 54.8
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 7.5e-28 127.5 124 54.8
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 7.5e-28 127.5 126 55.6
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 9.9e-28 127.1 130 59.2
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 9.9e-28 127.1 124 54.8
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 9.9e-28 127.1 124 54.8
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 1.3e-27 126.7 126 57.1
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 1.3e-27 126.7 131 51.1
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.7e-27 126.3 120 59.2
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.7e-27 126.3 130 59.2
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 1.7e-27 126.3 130 56.2
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.2e-27 125.9 122 54.1
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 2.2e-27 125.9 118 66.1
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 2.2e-27 125.9 132 59.8
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.2e-27 125.9 118 60.2
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 2.9e-27 125.6 125 54.4
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 2.9e-27 125.6 121 62.8
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 2.9e-27 125.6 119 64.7
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 2.9e-27 125.6 128 57.0
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 6.4e-27 124.4 128 57.0
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 6.4e-27 124.4 128 56.2
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-26 123.6 124 54.0
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-26 123.6 124 54.0
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-26 123.6 124 54.0
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.1e-26 123.6 124 54.0
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.1e-26 123.6 119 64.7
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 1.1e-26 123.6 130 57.7
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.1e-26 123.6 117 59.0
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.4e-26 123.2 132 53.8
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 1.4e-26 123.2 131 57.3
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.9e-26 122.9 124 49.2
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.9e-26 122.9 124 53.2
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 1.9e-26 122.9 118 61.9
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 2.4e-26 122.5 119 63.9
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 3.2e-26 122.1 129 57.4
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 4.1e-26 121.7 130 54.6
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 5.4e-26 121.3 124 51.6
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 7.1e-26 120.9 119 58.8
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 9.2e-26 120.6 124 51.6
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 2.7e-25 119.0 128 53.1
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 2.7e-25 119.0 128 53.1
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 2.7e-25 119.0 128 53.1
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.7e-25 119.0 128 53.9
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.7e-25 119.0 128 53.9
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 2.7e-25 119.0 131 54.2
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 3.5e-25 118.6 131 52.7
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 4.6e-25 118.2 122 52.5
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 4.6e-25 118.2 122 60.7
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 6.0e-25 117.9 117 61.5
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.0e-24 117.1 131 48.1
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 1.0e-24 117.1 116 62.1
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 1.0e-24 117.1 136 52.2
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 1.3e-24 116.7 130 53.1
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.3e-24 116.7 130 53.1
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.3e-24 116.7 128 53.9
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 1.3e-24 116.7 131 56.5
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 1.3e-24 116.7 118 58.5
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 1.7e-24 116.3 131 50.4
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 2.3e-24 115.9 122 55.7
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 2.3e-24 115.9 122 55.7
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 3.0e-24 115.5 131 48.9
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 3.0e-24 115.5 131 47.3
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.9e-24 115.2 125 50.4
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.9e-24 115.2 125 50.4
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 3.9e-24 115.2 131 49.6
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 3.9e-24 115.2 131 49.6
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 3.9e-24 115.2 130 54.6
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 6.6e-24 114.4 131 49.6
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 8.6e-24 114.0 119 63.0
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 1.1e-23 113.6 128 51.6
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.5e-23 113.2 130 54.6
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 2.5e-23 112.5 131 46.6
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.3e-23 112.1 131 45.0
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.3e-23 112.1 131 48.9
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 4.3e-23 111.7 130 53.1
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 5.6e-23 111.3 119 58.0
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 7.3e-23 110.9 121 53.7
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 1.2e-22 110.2 69 71.0
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.2e-22 110.2 133 48.9
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 2.1e-22 109.4 111 54.1
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 2.1e-22 109.4 117 57.3
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 2.4e-21 105.9 133 53.4
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 2.4e-21 105.9 118 49.2
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 3.1e-21 105.5 130 45.4
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 1.2e-20 103.6 115 53.9
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 1.5e-20 103.2 112 49.1
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 3.4e-20 102.1 114 52.6
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 8.4e-19 97.4 119 47.9
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.1e-18 97.1 122 50.0
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 6.0e-17 91.3 149 38.3
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 5.1e-16 88.2 117 47.9
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 1.9e-15 86.3 144 40.3
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 4.3e-15 85.1 152 38.8
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 4.3e-15 85.1 115 43.5
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 4.3e-15 85.1 92 60.9
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 1.1e-13 80.5 107 44.9
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.1e-13 80.5 158 33.5
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 6.9e-13 77.8 121 40.5
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.9e-10 69.7 98 43.9
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.8e-09 64.3 153 33.3
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.0e-08 63.9 45 66.7
Peaxi162Scf00461g01011 Petunia axillaris HOM05D003630 ORTHO05D004151 1.7e-08 63.2 39 76.9
Pp3c23_13750 Physcomitrium patens HOM05D003630 ORTHO05D004151 3.3e-07 58.9 164 29.9
Actinidia26134 Actinidia chinensis HOM05D003630 ORTHO05D004151 5.6e-07 58.2 50 56.0
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.3e-07 57.8 156 32.7
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 2.1e-06 56.2 142 28.9
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 6.2e-06 54.7 29 79.3


User provided reference genes

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