Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012705 Solanum tuberosum HOM05D000056 ORTHO05D020914 1.1e-56 223.0 113 100.0
PGSC0003DMG400012704 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.8e-47 191.8 113 82.3
Sopen04g008720 Solanum pennellii HOM05D000056 ORTHO05D020914 1.4e-46 189.5 113 82.3
PGSC0003DMG400012706 Solanum tuberosum HOM05D000056 ORTHO05D020914 2.0e-45 185.7 113 78.8
Nitab4.5_0011420g0020 Nicotiana tabacum HOM05D000056 ORTHO05D020914 1.3e-28 129.8 110 60.9
Nitab4.5_0000943g0140 Nicotiana tabacum HOM05D000056 ORTHO05D020914 1.6e-26 122.9 111 63.1
Peaxi162Scf00064g00047 Petunia axillaris HOM05D000056 ORTHO05D020914 4.4e-24 114.8 112 58.9
Lj1P1105T18 Lonicera japonica HOM05D000056 ORTHO05D000019 1.7e-12 76.3 108 38.0
Nitab4.5_0005306g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.0e-12 75.5 106 36.8
CAN.G941.10 Capsicum annuum HOM05D000056 ORTHO05D000019 5.0e-12 74.7 108 35.2
Nitab4.5_0005442g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.0e-12 74.7 108 36.1
Sabra16G0041500 Salix brachista HOM05D000056 ORTHO05D000019 6.6e-12 74.3 112 38.4
Nitab4.5_0000515g0100 Nicotiana tabacum HOM05D000056 ORTHO05D000019 8.6e-12 73.9 108 36.1
Sabra16G0004400 Salix brachista HOM05D000056 ORTHO05D000019 8.6e-12 73.9 103 37.9
Solyc10g079520.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 8.6e-12 73.9 108 35.2
Nitab4.5_0000515g0170 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.1e-11 73.6 106 35.8
Solyc10g079530.2 Solanum lycopersicum HOM05D000056 ORTHO05D000019 1.1e-11 73.6 108 35.2
PGSC0003DMG400008157 Solanum tuberosum HOM05D000056 ORTHO05D000019 1.5e-11 73.2 117 35.9
Peaxi162Scf01029g00420 Petunia axillaris HOM05D000056 ORTHO05D000019 1.9e-11 72.8 108 36.1
Sopen10g030170 Solanum pennellii HOM05D000056 ORTHO05D000019 1.9e-11 72.8 108 34.3
Sabra16G0004800 Salix brachista HOM05D000056 ORTHO05D000019 2.5e-11 72.4 112 38.4
Sabra16G0046600 Salix brachista HOM05D000056 ORTHO05D000019 3.3e-11 72.0 103 36.9
Sabra16G0041400 Salix brachista HOM05D000056 ORTHO05D000019 4.3e-11 71.6 103 36.9
Sabra16G0045700 Salix brachista HOM05D000056 ORTHO05D000019 4.3e-11 71.6 103 36.9
Lj1P1106T13 Lonicera japonica HOM05D000056 ORTHO05D000019 9.5e-11 70.5 108 35.2
Sabra16G0004100 Salix brachista HOM05D000056 ORTHO05D000019 9.5e-11 70.5 100 37.0
Sabra16G0040900 Salix brachista HOM05D000056 ORTHO05D000019 1.2e-10 70.1 103 35.9
Sabra16G0045600 Salix brachista HOM05D000056 ORTHO05D000019 1.6e-10 69.7 103 35.9
Dinv08488 Davidia involucrata HOM05D000056 ORTHO05D000019 2.1e-10 69.3 108 33.3
Solyc04g017640.1 Solanum lycopersicum HOM05D000056 ORTHO05D020914 2.1e-10 69.3 39 79.5
Sabra16G0003900 Salix brachista HOM05D000056 ORTHO05D000019 2.8e-10 68.9 103 36.9
Dinv08487 Davidia involucrata HOM05D000056 ORTHO05D000019 3.6e-10 68.6 105 34.3
Sabra16G0046900 Salix brachista HOM05D000056 ORTHO05D000019 3.6e-10 68.6 103 35.0
Sabra16G0043000 Salix brachista HOM05D000056 ORTHO05D000019 6.2e-10 67.8 99 36.4
Sabra16G0042400 Salix brachista HOM05D000056 ORTHO05D000019 1.1e-09 67.0 103 35.0
Sabra16G0042900 Salix brachista HOM05D000056 ORTHO05D000019 1.1e-09 67.0 103 35.0
Sabra16G0046000 Salix brachista HOM05D000056 ORTHO05D000019 1.1e-09 67.0 103 35.0
Nitab4.5_0001618g0120 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.4e-09 66.6 68 51.5
Oeu021192.1 Olea europaea HOM05D000056 ORTHO05D000019 1.8e-09 66.2 100 38.0
Atru.chr1.1465 Acer truncatum HOM05D000056 ORTHO05D000019 2.3e-09 65.9 100 35.0
Cfa016717 Carpinus fangiana HOM05D000056 ORTHO05D000019 2.3e-09 65.9 102 35.3
TAR623G0956 Trochodendron aralioides HOM05D000056 ORTHO05D000019 2.3e-09 65.9 103 35.9
Atru.chr1.1453 Acer truncatum HOM05D000056 ORTHO05D000019 3.1e-09 65.5 100 35.0
Sabra16G0041000 Salix brachista HOM05D000056 ORTHO05D000019 3.1e-09 65.5 99 35.4
Oeu020151.1 Olea europaea HOM05D000056 ORTHO05D000019 4.0e-09 65.1 102 35.3
Lj1C1107T7 Lonicera japonica HOM05D000056 ORTHO05D000019 5.2e-09 64.7 101 36.6
Oeu026334.1 Olea europaea HOM05D000056 ORTHO05D000019 5.2e-09 64.7 102 38.2
Sabra16G0003500 Salix brachista HOM05D000056 ORTHO05D000019 5.2e-09 64.7 103 35.9
Ciclev10004884m.g Citrus clementina HOM05D000056 ORTHO05D000019 6.8e-09 64.3 100 34.0
Atru.chr1.1424 Acer truncatum HOM05D000056 ORTHO05D000019 8.9e-09 63.9 112 31.2
Cfa016714 Carpinus fangiana HOM05D000056 ORTHO05D000019 8.9e-09 63.9 102 35.3
Dinv01134 Davidia involucrata HOM05D000056 ORTHO05D000019 8.9e-09 63.9 100 35.0
Dinv08474 Davidia involucrata HOM05D000056 ORTHO05D000019 8.9e-09 63.9 100 35.0
Dinv08475 Davidia involucrata HOM05D000056 ORTHO05D000019 8.9e-09 63.9 100 35.0
Oeu021186.1 Olea europaea HOM05D000056 ORTHO05D000019 8.9e-09 63.9 104 34.6
Rhsim03G0059100 Rhododendron simsii HOM05D000056 ORTHO05D000019 8.9e-09 63.9 103 33.0
Sabra16G0004900 Salix brachista HOM05D000056 ORTHO05D000019 8.9e-09 63.9 101 33.7
TAR623G1494 Trochodendron aralioides HOM05D000056 ORTHO05D000019 8.9e-09 63.9 103 34.0
Haze_19733 Corylus avellana HOM05D000056 ORTHO05D000019 1.2e-08 63.5 102 36.3
Dinv03864 Davidia involucrata HOM05D000056 ORTHO05D000019 1.2e-08 63.5 103 33.0
Rhsim04G0109800 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.2e-08 63.5 108 32.4
Medtr7g446270 Medicago truncatula HOM05D000056 ORTHO05D000019 1.5e-08 63.2 100 35.0
PGSC0003DMG400021698 Solanum tuberosum HOM05D000056 ORTHO05D000019 1.5e-08 63.2 103 33.0
ECA248G3977 Erigeron canadensis HOM05D000056 ORTHO05D000019 2.0e-08 62.8 103 35.9
Potri.016G039300 Populus trichocarpa HOM05D000056 ORTHO05D000019 2.0e-08 62.8 100 37.0
MD00G1049100 Malus domestica HOM05D000056 ORTHO05D000019 2.6e-08 62.4 102 35.3
Rhsim03G0059500 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.6e-08 62.4 103 33.0
Rhsim04G0110200 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.6e-08 62.4 108 32.4
Cpa.g.sc5.199 Carica papaya HOM05D000056 ORTHO05D000019 3.4e-08 62.0 100 34.0
CiPaw.09G044500 Carya illinoinensis HOM05D000056 ORTHO05D000019 3.4e-08 62.0 103 33.0
Rhsim03G0032300 Rhododendron simsii HOM05D000056 ORTHO05D000019 3.4e-08 62.0 103 35.0
arahy.Tifrunner.gnm1.ann1.79I5W7 Arachis hypogaea HOM05D000056 ORTHO05D000019 4.4e-08 61.6 116 34.5
Oeu008203.1 Olea europaea HOM05D000056 ORTHO05D000019 4.4e-08 61.6 103 35.0
Oeu039637.1 Olea europaea HOM05D000056 ORTHO05D000019 4.4e-08 61.6 102 33.3
Sabra16G0045500 Salix brachista HOM05D000056 ORTHO05D000019 4.4e-08 61.6 106 38.7
Hma1.2p1_0005F.1_g004350 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 5.8e-08 61.2 94 35.1
Rhsim03G0032500 Rhododendron simsii HOM05D000056 ORTHO05D000019 5.8e-08 61.2 104 34.6
Rhsim03G0033000 Rhododendron simsii HOM05D000056 ORTHO05D000019 5.8e-08 61.2 103 35.0
Sabra16G0004000 Salix brachista HOM05D000056 ORTHO05D000019 5.8e-08 61.2 100 35.0
arahy.Tifrunner.gnm1.ann1.RB9UB5 Arachis hypogaea HOM05D000056 ORTHO05D000019 7.5e-08 60.8 116 35.3
Haze_19723 Corylus avellana HOM05D000056 ORTHO05D000019 9.9e-08 60.5 103 33.0
Medtr7g060840 Medicago truncatula HOM05D000056 ORTHO05D000019 9.9e-08 60.5 103 30.1
Potri.016G039200 Populus trichocarpa HOM05D000056 ORTHO05D000019 9.9e-08 60.5 102 35.3
Sabra16G0004500 Salix brachista HOM05D000056 ORTHO05D000019 9.9e-08 60.5 100 35.0
TAR623G0219 Trochodendron aralioides HOM05D000056 ORTHO05D000019 9.9e-08 60.5 100 32.0
Dinv01530 Davidia involucrata HOM05D000056 ORTHO05D000019 1.3e-07 60.1 104 34.6
Potri.016G039100 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.3e-07 60.1 102 32.4
Sabra16G0003300 Salix brachista HOM05D000056 ORTHO05D000019 1.3e-07 60.1 106 35.8
Sopen03g027340 Solanum pennellii HOM05D000056 ORTHO05D000019 1.3e-07 60.1 103 32.0
vmacro22388 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 1.3e-07 60.1 103 31.1
Rhsim10G0160600 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.7e-07 59.7 103 32.0
VMungo0464G1788 Vigna mungo HOM05D000056 ORTHO05D000019 1.7e-07 59.7 102 35.3
QL07p007690 Quercus lobata HOM05D000056 ORTHO05D000019 2.2e-07 59.3 103 31.1
Sabra16G0040600 Salix brachista HOM05D000056 ORTHO05D000019 2.2e-07 59.3 106 34.9
Solyc03g078830.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.2e-07 59.3 103 32.0
vmacro22389 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 2.2e-07 59.3 103 32.0
CSS0018380 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 2.9e-07 58.9 92 31.5
Glyma.05G076600 Glycine max HOM05D000056 ORTHO05D000019 2.9e-07 58.9 100 29.0
Nn7g38066 Nelumbo nucifera HOM05D000056 ORTHO05D000019 2.9e-07 58.9 102 31.4
Nitab4.5_0011518g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.9e-07 58.9 102 35.3
Rhsim04G0110000 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.9e-07 58.9 103 31.1
RhsimUnG0245600 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.9e-07 58.9 103 31.1
vmacro22386 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 2.9e-07 58.9 103 31.1
CANSAT80G0123 Cannabis sativa HOM05D000056 ORTHO05D000019 3.7e-07 58.5 103 31.1
CANSAT80G1272 Cannabis sativa HOM05D000056 ORTHO05D000019 3.7e-07 58.5 103 31.1
Nitab4.5_0003134g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.7e-07 58.5 102 34.3
Dinv03852 Davidia involucrata HOM05D000056 ORTHO05D000019 4.9e-07 58.2 103 32.0
Duzib056G0003 Durio zibethinus HOM05D000056 ORTHO05D000019 4.9e-07 58.2 103 35.0
MD02G1233700 Malus domestica HOM05D000056 ORTHO05D000019 4.9e-07 58.2 100 31.0
MD07G1070100 Malus domestica HOM05D000056 ORTHO05D000019 4.9e-07 58.2 100 31.0
Potri.016G039700 Populus trichocarpa HOM05D000056 ORTHO05D000019 4.9e-07 58.2 103 33.0
Potri.016G039733 Populus trichocarpa HOM05D000056 ORTHO05D000019 4.9e-07 58.2 103 33.0
Solyc04g019310.3 Solanum lycopersicum HOM05D000056 ORTHO05D000019 4.9e-07 58.2 102 32.4
Solyc04g019313.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 4.9e-07 58.2 102 32.4
Oeu008207.1 Olea europaea HOM05D000056 ORTHO05D000019 6.4e-07 57.8 103 34.0
TAR623G0613 Trochodendron aralioides HOM05D000056 ORTHO05D000019 6.4e-07 57.8 103 32.0
TAR623G1121 Trochodendron aralioides HOM05D000056 ORTHO05D000019 6.4e-07 57.8 103 32.0
Medtr7g060320 Medicago truncatula HOM05D000056 ORTHO05D000019 8.3e-07 57.4 102 30.4
Medtr7g060370 Medicago truncatula HOM05D000056 ORTHO05D000019 8.3e-07 57.4 103 30.1
Nn7g38064 Nelumbo nucifera HOM05D000056 ORTHO05D000019 8.3e-07 57.4 102 31.4
Potri.006G042300 Populus trichocarpa HOM05D000056 ORTHO05D000019 8.3e-07 57.4 111 34.2
QL07p012299 Quercus lobata HOM05D000056 ORTHO05D000019 8.3e-07 57.4 108 25.9
Rhsim04G0110100 Rhododendron simsii HOM05D000056 ORTHO05D000019 8.3e-07 57.4 102 31.4
Rhsim10G0161100 Rhododendron simsii HOM05D000056 ORTHO05D000019 8.3e-07 57.4 103 30.1
arahy.Tifrunner.gnm1.ann1.55DM45 Arachis hypogaea HOM05D000056 ORTHO05D000019 1.1e-06 57.0 124 30.6
CiPaw.09G045000 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.1e-06 57.0 102 32.4
Sc13g0001230 Simmondsia chinensis HOM05D000056 ORTHO05D000019 1.1e-06 57.0 103 28.2
PGSC0003DMG400010632 Solanum tuberosum HOM05D000056 ORTHO05D000019 1.1e-06 57.0 102 31.4
arahy.Tifrunner.gnm1.ann1.S0VIRI Arachis hypogaea HOM05D000056 ORTHO05D000019 1.4e-06 56.6 112 35.7
Dinv01873 Davidia involucrata HOM05D000056 ORTHO05D000019 1.4e-06 56.6 103 33.0
Medtr7g059540 Medicago truncatula HOM05D000056 ORTHO05D000019 1.4e-06 56.6 103 30.1
Oeu023138.1 Olea europaea HOM05D000056 ORTHO05D000019 1.4e-06 56.6 112 30.4
Sabra16G0042500 Salix brachista HOM05D000056 ORTHO05D000019 1.4e-06 56.6 106 34.0
Dinv18691 Davidia involucrata HOM05D000056 ORTHO05D000019 1.9e-06 56.2 103 33.0
Nitab4.5_0000550g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.9e-06 56.2 102 32.4
Dinv04138 Davidia involucrata HOM05D000056 ORTHO05D000019 2.4e-06 55.8 103 32.0
Gohir.A13G156300 Gossypium hirsutum HOM05D000056 ORTHO05D000019 2.4e-06 55.8 110 30.9
Medtr7g059480 Medicago truncatula HOM05D000056 ORTHO05D000019 2.4e-06 55.8 103 31.1
Oeu029714.1 Olea europaea HOM05D000056 ORTHO05D000019 2.4e-06 55.8 101 35.6
Potri.006G042500 Populus trichocarpa HOM05D000056 ORTHO05D000019 2.4e-06 55.8 113 32.7
QL07p012225 Quercus lobata HOM05D000056 ORTHO05D000019 2.4e-06 55.8 108 26.9
Sabra16G0041800 Salix brachista HOM05D000056 ORTHO05D000019 2.4e-06 55.8 103 34.0
Sed0020581 Sechium edule HOM05D000056 ORTHO05D000019 2.4e-06 55.8 110 30.0
PGSC0003DMG400037036 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.4e-06 55.8 104 32.7
vmacro07509 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 2.4e-06 55.8 103 29.1
vmacro22387 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 2.4e-06 55.8 103 29.1
arahy.Tifrunner.gnm1.ann1.I7S5UQ Arachis hypogaea HOM05D000056 ORTHO05D000019 3.2e-06 55.5 108 31.5
arahy.Tifrunner.gnm1.ann1.S3AGIE Arachis hypogaea HOM05D000056 ORTHO05D000019 3.2e-06 55.5 108 31.5
Gorai.007G355100 Gossypium raimondii HOM05D000056 ORTHO05D000019 3.2e-06 55.5 104 31.7
Nitab4.5_0007072g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.2e-06 55.5 102 31.4
Oeu008201.1 Olea europaea HOM05D000056 ORTHO05D000019 3.2e-06 55.5 103 32.0
Oeu063753.1 Olea europaea HOM05D000056 ORTHO05D000019 3.2e-06 55.5 103 31.1
Potri.006G042946 Populus trichocarpa HOM05D000056 ORTHO05D000019 3.2e-06 55.5 103 33.0
Potri.016G040100 Populus trichocarpa HOM05D000056 ORTHO05D000019 3.2e-06 55.5 100 31.0
QL07p006707 Quercus lobata HOM05D000056 ORTHO05D000019 3.2e-06 55.5 100 29.0
TPR.G31282 Trifolium pratense HOM05D000056 ORTHO05D000019 3.2e-06 55.5 101 29.7
ATR0582G123 Amborella trichopoda HOM05D000056 ORTHO05D000019 4.1e-06 55.1 113 31.9
Oeu011295.1 Olea europaea HOM05D000056 ORTHO05D000019 4.1e-06 55.1 103 31.1
TAR122G0003 Trochodendron aralioides HOM05D000056 ORTHO05D000019 4.1e-06 55.1 90 32.2
TAR383G0237 Trochodendron aralioides HOM05D000056 ORTHO05D000019 4.1e-06 55.1 103 33.0
CANSAT78G2486 Cannabis sativa HOM05D000056 ORTHO05D000019 5.4e-06 54.7 104 30.8
Gohir.A11G308700 Gossypium hirsutum HOM05D000056 ORTHO05D000019 5.4e-06 54.7 104 32.7
Gorai.007G354600 Gossypium raimondii HOM05D000056 ORTHO05D000019 5.4e-06 54.7 104 31.7
Hma1.2p1_0144F.1_g064670 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 5.4e-06 54.7 112 33.0
Hma1.2p1_2712F.1_g327340 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 5.4e-06 54.7 112 33.0
MELO3C011242.2 Cucumis melo HOM05D000056 ORTHO05D000019 7.1e-06 54.3 110 31.8
Dinv01488 Davidia involucrata HOM05D000056 ORTHO05D000019 7.1e-06 54.3 100 32.0
Peaxi162Scf00111g00085 Petunia axillaris HOM05D000056 ORTHO05D000019 7.1e-06 54.3 102 30.4
CiPaw.09G045200 Carya illinoinensis HOM05D000056 ORTHO05D000019 9.2e-06 53.9 103 29.1
Ca_21516_v3 Cicer arietinum L. HOM05D000056 ORTHO05D000019 9.2e-06 53.9 100 29.0
Gohir.D11G323900 Gossypium hirsutum HOM05D000056 ORTHO05D000019 9.2e-06 53.9 104 31.7
Gohir.D11G324200 Gossypium hirsutum HOM05D000056 ORTHO05D000019 9.2e-06 53.9 104 31.7
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 9.2e-06 53.9 86 33.7
TAR633G1260 Trochodendron aralioides HOM05D000991 ORTHO05D000848 9.2e-06 53.9 100 33.0


User provided reference genes

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