Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012686 Solanum tuberosum HOM05D004086 ORTHO05D004641 4.7e-117 424.5 206 100.0
Solyc02g085560.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 3.9e-111 404.8 202 96.0
Sopen02g030230 Solanum pennellii HOM05D004086 ORTHO05D004641 1.1e-110 403.3 202 95.5
PGSC0003DMG400004762 Solanum tuberosum HOM05D004086 ORTHO05D004641 2.8e-93 345.5 202 83.2
Sopen08g027080 Solanum pennellii HOM05D004086 ORTHO05D004641 6.2e-93 344.4 202 82.7
Solyc08g078600.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 1.4e-92 343.2 202 82.2
CAN.G1058.29 Capsicum annuum HOM05D004086 ORTHO05D004641 1.1e-89 333.6 202 79.2
Nitab4.5_0010593g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 3.0e-87 325.5 202 76.7
CAN.G358.119 Capsicum annuum HOM05D004086 ORTHO05D004641 3.3e-86 322.0 202 76.7
Nitab4.5_0001279g0090 Nicotiana tabacum HOM05D004086 ORTHO05D004641 1.6e-85 319.7 202 75.7
Nitab4.5_0008457g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 6.2e-85 317.8 202 75.7
Nitab4.5_0004445g0020 Nicotiana tabacum HOM05D004086 ORTHO05D004641 4.0e-84 315.1 198 75.8
Peaxi162Scf00515g00225 Petunia axillaris HOM05D004086 ORTHO05D004641 7.9e-80 300.8 202 70.3
Oeu053005.1 Olea europaea HOM05D004086 ORTHO05D004641 6.1e-56 221.5 203 53.7
MSTRG.23544 Avicennia marina HOM05D004086 ORTHO05D004641 5.9e-51 204.9 198 52.0
Cc07_g09240 Coffea canephora HOM05D004086 ORTHO05D004641 1.3e-45 187.2 206 46.1
GSVIVG01018995001 Vitis vinifera HOM05D004086 ORTHO05D004641 1.3e-45 187.2 207 47.8
Migut.H00181 Erythranthe guttata HOM05D004086 ORTHO05D004641 9.1e-44 181.0 202 44.1
Dinv39963 Davidia involucrata HOM05D004086 ORTHO05D004641 1.2e-43 180.6 207 44.0
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla HOM05D004086 ORTHO05D004641 1.1e-41 174.1 196 44.9
CSS0022456 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 2.5e-41 172.9 200 44.0
CSS0048181 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 2.5e-41 172.9 200 44.0
Lj5A533G14 Lonicera japonica HOM05D004086 ORTHO05D004641 2.5e-41 172.9 196 42.3
Actinidia12113 Actinidia chinensis HOM05D004086 ORTHO05D004641 1.2e-38 164.1 197 43.7
Actinidia36545 Actinidia chinensis HOM05D004086 ORTHO05D004641 1.2e-38 164.1 197 43.7
CANSAT01G2856 Cannabis sativa HOM05D004086 ORTHO05D004641 1.2e-38 164.1 207 40.1
Hund05506 Selenicereus undatus HOM05D004086 ORTHO05D004641 5.7e-38 161.8 194 41.8
TAR628G1622 Trochodendron aralioides HOM05D004086 ORTHO05D004641 9.8e-38 161.0 201 44.3
TWI09G1017 Tripterygium wilfordii HOM05D004086 ORTHO05D004641 1.3e-37 160.6 203 39.9
Manes.07G068600 Manihot esculenta HOM05D004086 ORTHO05D004641 8.3e-37 157.9 196 41.3
DCAR_025930 Daucus carota HOM05D004086 ORTHO05D004641 1.8e-36 156.8 205 41.0
Nn5g29538 Nelumbo nucifera HOM05D004086 ORTHO05D004641 4.1e-36 155.6 208 44.2
Duzib264G0994 Durio zibethinus HOM05D004086 ORTHO05D004641 2.0e-35 153.3 205 41.5
Thecc.01G039100 Theobroma cacao HOM05D004086 ORTHO05D004641 4.5e-35 152.1 205 41.0
EL10Ac7g17738 Beta vulgaris HOM05D004086 ORTHO05D004641 1.7e-34 150.2 203 36.9
AUR62025406 Chenopodium quinoa HOM05D004086 ORTHO05D004641 2.9e-34 149.4 196 42.3
COL.COLO4_22111 Corchorus olitorius HOM05D004086 ORTHO05D004641 2.5e-33 146.4 205 40.0
Potri.007G028600 Populus trichocarpa HOM05D004086 ORTHO05D004641 4.2e-33 145.6 195 40.5
Atru.chr3.545 Acer truncatum HOM05D004086 ORTHO05D004641 1.6e-32 143.7 206 38.8
Ah.15g091580 Amaranthus hybridus HOM05D004086 ORTHO05D004641 2.8e-32 142.9 191 39.3
ClCG07G009030 Citrullus lanatus HOM05D004086 ORTHO05D004641 3.6e-32 142.5 189 39.2
ECA232G4057 Erigeron canadensis HOM05D004086 ORTHO05D001499 4.7e-32 142.1 182 37.9
vmacro07910 Vaccinium macrocarpon HOM05D004086 ORTHO05D004641 4.7e-32 142.1 212 39.2
Gohir.D11G192200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 8.0e-32 141.4 209 38.8
Gorai.007G205200 Gossypium raimondii HOM05D004086 ORTHO05D004641 8.0e-32 141.4 209 38.8
Gohir.D11G227980 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.8e-31 140.2 209 39.2
Ah.15g091670 Amaranthus hybridus HOM05D004086 ORTHO05D004641 2.3e-31 139.8 195 40.0
AUR62008836 Chenopodium quinoa HOM05D004086 ORTHO05D004641 2.3e-31 139.8 167 44.3
COL.COLO4_14865 Corchorus olitorius HOM05D004086 ORTHO05D004641 3.0e-31 139.4 185 42.2
Ciclev10025048m.g Citrus clementina HOM05D004086 ORTHO05D004641 6.8e-31 138.3 207 33.8
unitig_52.g17585 Utricularia gibba HOM05D004086 ORTHO05D004641 1.2e-30 137.5 202 40.6
DCAR_023357 Daucus carota HOM05D004086 ORTHO05D004641 2.6e-30 136.3 205 36.1
ECA238G3830 Erigeron canadensis HOM05D004086 ORTHO05D004641 2.6e-30 136.3 193 38.9
Sed0023254 Sechium edule HOM05D004086 ORTHO05D004641 3.4e-30 136.0 195 37.4
Gohir.A11G185700 Gossypium hirsutum HOM05D004086 ORTHO05D004641 5.7e-30 135.2 209 37.3
Sabra07G0024800 Salix brachista HOM05D004086 ORTHO05D004641 2.8e-29 132.9 221 35.3
Medtr5g019810 Medicago truncatula HOM05D004086 ORTHO05D004641 8.3e-29 131.3 206 35.9
MELO3C017544.2 Cucumis melo HOM05D004086 ORTHO05D004641 1.1e-28 131.0 183 38.8
FAN26G0470 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.1e-28 131.0 206 36.9
Rhsim03G0093700 Rhododendron simsii HOM05D004086 ORTHO05D004641 1.4e-28 130.6 172 44.2
Psat2g160960 Pisum sativum HOM05D004086 ORTHO05D004641 5.4e-28 128.6 203 34.5
CsaV3_4G005180 Cucumis sativus L. HOM05D004086 ORTHO05D004641 9.2e-28 127.9 181 37.6
FAN23G2825 Fragaria x ananassa HOM05D004086 ORTHO05D004641 9.2e-28 127.9 206 35.9
FAN28G1508 Fragaria x ananassa HOM05D004086 ORTHO05D004641 9.2e-28 127.9 206 35.9
Prupe.7G151600 Prunus persica HOM05D004086 ORTHO05D004641 1.2e-27 127.5 197 38.6
Ca_00390_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 2.0e-27 126.7 196 33.7
THA.LOC104819797 Tarenaya hassleriana HOM05D004086 ORTHO05D004641 2.7e-27 126.3 196 36.7
FAN19G3131 Fragaria x ananassa HOM05D004086 ORTHO05D004641 4.5e-27 125.6 206 35.9
TPR.G18816 Trifolium pratense HOM05D004086 ORTHO05D004641 4.5e-27 125.6 194 35.1
Thhalv10003751m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 7.8e-27 124.8 200 35.0
Glyma.11G009900 Glycine max HOM05D004086 ORTHO05D004641 1.0e-26 124.4 203 37.9
HPP92_015988 Vanilla planifolia HOM05D004086 ORTHO05D004641 1.0e-26 124.4 198 39.4
Haze_02099 Corylus avellana HOM05D004086 ORTHO05D004641 1.3e-26 124.0 189 38.6
PSO675G7346 Papaver somniferum HOM05D004086 ORTHO05D004641 1.3e-26 124.0 204 33.3
FvH4_1g13700 Fragaria vesca HOM05D004086 ORTHO05D004641 1.7e-26 123.6 206 35.4
HanXRQChr09g0262111 Helianthus annuus HOM05D004086 ORTHO05D004641 1.7e-26 123.6 180 33.9
Haze_15127 Corylus avellana HOM05D004086 ORTHO05D004641 2.3e-26 123.2 183 39.9
Aqoxy6G01048 Aquilegia oxysepala HOM05D004086 ORTHO05D004641 2.9e-26 122.9 202 35.1
PSO541G3560 Papaver somniferum HOM05D004086 ORTHO05D004641 2.9e-26 122.9 204 33.3
Sc17g0002710 Simmondsia chinensis HOM05D004086 ORTHO05D004641 2.9e-26 122.9 166 36.1
Lsat_1_v5_gn_4_150860 Lactuca sativa HOM05D004086 ORTHO05D004641 6.6e-26 121.7 169 38.5
RcHm_v2.0_Chr2g0102021 Rosa chinensis HOM05D004086 ORTHO05D004641 8.6e-26 121.3 206 34.5
Phvul.002G040400 Phaseolus vulgaris HOM05D004086 ORTHO05D004641 1.1e-25 120.9 196 35.7
CiPaw.02G015600 Carya illinoinensis HOM05D004086 ORTHO05D004641 1.9e-25 120.2 210 35.2
Lalb_Chr20g0123501 Lupinus albus HOM05D004086 ORTHO05D004641 5.6e-25 118.6 200 33.5
AUR62025404 Chenopodium quinoa HOM05D000200 ORTHO05D000262 1.6e-24 117.1 165 42.4
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 2.1e-24 116.7 199 36.2
VMungo1215G0116 Vigna mungo HOM05D004086 ORTHO05D004641 2.1e-24 116.7 201 35.3
BolC7t44527H Brassica oleracea HOM05D004086 ORTHO05D004641 2.8e-24 116.3 202 36.1
C07p39950 Brassica napus HOM05D004086 ORTHO05D004641 3.6e-24 115.9 202 35.6
CDE05G2435 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.7e-24 115.5 189 37.6
Eucgr.H01260 Eucalyptus grandis HOM05D004086 ORTHO05D004641 4.7e-24 115.5 197 34.5
Gohir.D11G227900 Gossypium hirsutum HOM05D004086 ORTHO05D004641 4.7e-24 115.5 205 35.6
MD02G1151400 Malus domestica HOM05D004086 ORTHO05D004641 1.8e-23 113.6 205 33.7
AL8G23320 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 2.3e-23 113.2 202 34.7
Sp2g19840 Schrenkiella parvula HOM05D004086 ORTHO05D004641 3.0e-23 112.8 200 35.0
SpUn0021_0010 Schrenkiella parvula HOM05D004086 ORTHO05D004641 3.0e-23 112.8 200 35.0
QL06p045466 Quercus lobata HOM05D004086 ORTHO05D004641 4.0e-23 112.5 190 33.7
A06p38290 Brassica napus HOM05D004086 ORTHO05D004641 5.2e-23 112.1 202 35.6
BraA06t26744Z Brassica rapa HOM05D004086 ORTHO05D004641 8.9e-23 111.3 202 35.6
Medtr5g026040 Medicago truncatula HOM05D004086 ORTHO05D004641 1.2e-22 110.9 189 34.9
AT5G49530 Arabidopsis thaliana HOM05D004086 ORTHO05D004641 2.6e-22 109.8 207 32.4
Lj5g0019705 Lotus japonicus HOM05D004086 ORTHO05D004641 3.4e-22 109.4 190 33.7
CARHR050710 Cardamine hirsuta HOM05D004086 ORTHO05D004641 4.4e-22 109.0 195 34.4
CARHR287960 Cardamine hirsuta HOM05D004086 ORTHO05D004641 5.8e-22 108.6 205 34.1
Thhalv10023969m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 1.3e-21 107.5 213 33.3
Lsat_1_v5_gn_4_150881 Lactuca sativa HOM05D004086 ORTHO05D004641 3.7e-21 105.9 134 40.3
Cpa.g.sc353.3 Carica papaya HOM05D004086 ORTHO05D004641 4.9e-21 105.5 167 34.7
Carub.0008s0941 Capsella rubella HOM05D004086 ORTHO05D004641 1.4e-20 104.0 201 32.3
Ca_29955_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 3.2e-20 102.8 143 36.4
HPP92_026151 Vanilla planifolia HOM05D004086 ORTHO05D004641 3.2e-20 102.8 198 34.8
CDE10G1264 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.1e-20 102.4 144 40.3
AL5G27650 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 9.2e-20 101.3 188 34.0
Aa31LG11G8330 Aethionema arabicum HOM05D004086 ORTHO05D004641 7.8e-19 98.2 168 36.9
Oeu053017.4 Olea europaea HOM05D004086 ORTHO05D004641 1.7e-18 97.1 103 50.5
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea HOM05D004086 ORTHO05D004641 1.5e-17 94.0 197 28.9
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea HOM05D004086 ORTHO05D004641 7.3e-17 91.7 197 28.9
MD15G1266000 Malus domestica HOM05D004086 ORTHO05D004641 1.6e-16 90.5 142 36.6
FvH4_2g10200 Fragaria vesca HOM05D004086 ORTHO05D004641 2.9e-13 79.7 181 30.4
PSO017G0414 Papaver somniferum HOM05D004086 ORTHO05D004641 3.7e-13 79.3 136 33.8
Oeu053007.1 Olea europaea HOM05D004086 ORTHO05D004641 1.9e-12 77.0 78 51.3
Zm00001eb269020 Zea mays HOM05D004086 ORTHO05D004641 1.9e-12 77.0 143 35.7
FAN24G1278 Fragaria x ananassa HOM05D004086 ORTHO05D004641 2.4e-12 76.6 141 36.2
CBR_g22032 Chara braunii HOM05D004086 ORTHO05D004641 4.6e-11 72.4 148 32.4
Mapoly0113s0019 Marchantia polymorpha HOM05D004086 ORTHO05D004641 6.0e-11 72.0 202 26.7
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis HOM05D004086 ORTHO05D004641 1.0e-10 71.2 197 28.4
SMO203G0104 Selaginella moellendorffii HOM05D004086 ORTHO05D004641 3.9e-10 69.3 193 24.9
Pp3c2_15450 Physcomitrium patens HOM05D004086 ORTHO05D004641 8.6e-10 68.2 189 28.0
SEGI_33702 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 2.5e-09 66.6 115 34.8
ATR0064G058 Amborella trichopoda HOM05D004086 ORTHO05D004641 4.7e-08 62.4 159 29.6


User provided reference genes

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