Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012509 Solanum tuberosum HOM05D005346 ORTHO05D020323 1.1e-105 386.7 204 100.0
Sopen08g003450 Solanum pennellii HOM05D005346 ORTHO05D020323 3.9e-87 325.1 177 97.7
Solyc08g007490.3 Solanum lycopersicum HOM05D005346 ORTHO05D020323 2.5e-86 322.4 177 97.2
Peaxi162Scf00102g01240 Petunia axillaris HOM05D005346 ORTHO05D020323 3.8e-66 255.4 178 78.1
Nitab4.5_0001265g0030 Nicotiana tabacum HOM05D005346 ORTHO05D020323 1.2e-59 233.8 177 74.0
Nitab4.5_0001816g0160 Nicotiana tabacum HOM05D005346 ORTHO05D020323 1.1e-49 200.7 178 66.3
CAN.G1394.34 Capsicum annuum HOM05D005346 ORTHO05D020323 2.9e-18 96.3 94 61.7
Cc08_g13250 Coffea canephora HOM05D005346 ORTHO05D007051 9.1e-12 74.7 141 36.9
Dinv39076 Davidia involucrata HOM05D005346 ORTHO05D007051 3.5e-11 72.8 197 34.0
vmacro14041 Vaccinium macrocarpon HOM05D005346 ORTHO05D007051 7.7e-11 71.6 195 33.8
Actinidia02088 Actinidia chinensis HOM05D005346 ORTHO05D007051 1.3e-10 70.9 127 37.0
Nitab4.5_0012948g0030 Nicotiana tabacum HOM05D005346 ORTHO05D007051 1.7e-10 70.5 166 35.5
Hma1.2p1_0138F.1_g063170 Hydrangea macrophylla HOM05D005346 ORTHO05D007051 2.9e-10 69.7 146 36.3
CSS0010264 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 5.0e-10 68.9 178 33.1
CSS0047104 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 5.0e-10 68.9 178 33.1
Rhsim07G0101400 Rhododendron simsii HOM05D005346 ORTHO05D007051 5.0e-10 68.9 200 34.0
CSS0033087 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 6.5e-10 68.6 127 37.8
CARHR048890 Cardamine hirsuta HOM05D005346 ORTHO05D007051 8.5e-10 68.2 195 31.8
Sopen08g027860 Solanum pennellii HOM05D005346 ORTHO05D007051 8.5e-10 68.2 168 33.3
CAN.G630.80 Capsicum annuum HOM05D005346 ORTHO05D007051 1.1e-09 67.8 148 35.1
BcaB07g31363 Brassica carinata HOM05D005346 ORTHO05D007051 1.5e-09 67.4 197 32.0
Solyc08g079490.4 Solanum lycopersicum HOM05D005346 ORTHO05D007051 1.5e-09 67.4 168 33.3
Sc22g0000580 Simmondsia chinensis HOM05D005346 ORTHO05D007051 1.9e-09 67.0 127 37.8
Atru.chr9.1434 Acer truncatum HOM05D005346 ORTHO05D007051 2.5e-09 66.6 197 32.0
Nn4g26377 Nelumbo nucifera HOM05D005346 ORTHO05D007051 3.2e-09 66.2 127 38.6
THA.LOC104809446 Tarenaya hassleriana HOM05D005346 ORTHO05D007051 3.2e-09 66.2 195 33.3
MSTRG.12059 Avicennia marina HOM05D005346 ORTHO05D007051 4.2e-09 65.9 178 36.5
Migut.E01045 Erythranthe guttata HOM05D005346 ORTHO05D007051 4.2e-09 65.9 180 33.3
PGSC0003DMG400003934 Solanum tuberosum HOM05D005346 ORTHO05D007051 4.2e-09 65.9 168 32.1
Carub.0002s0213 Capsella rubella HOM05D005346 ORTHO05D007051 5.5e-09 65.5 195 32.3
Migut.E01266 Erythranthe guttata HOM05D005346 ORTHO05D007051 5.5e-09 65.5 173 32.9
PGR042G0462 Punica granatum HOM05D005346 ORTHO05D007051 5.5e-09 65.5 150 34.7
BolC9t54826H Brassica oleracea HOM05D005346 ORTHO05D007051 7.2e-09 65.1 194 30.4
Potri.003G115300 Populus trichocarpa HOM05D005346 ORTHO05D007051 9.4e-09 64.7 129 36.4
Thecc.03G262000 Theobroma cacao HOM05D005346 ORTHO05D007051 9.4e-09 64.7 195 31.3
unitig_749.g13414 Utricularia gibba HOM05D005346 ORTHO05D007051 9.4e-09 64.7 139 35.3
BcaC04g22452 Brassica carinata HOM05D005346 ORTHO05D007051 1.2e-08 64.3 194 30.4
Peaxi162Scf00271g00130 Petunia axillaris HOM05D005346 ORTHO05D007051 1.2e-08 64.3 168 32.7
C09p19170 Brassica napus HOM05D005346 ORTHO05D007051 1.6e-08 63.9 194 30.4
MSTRG.25547 Avicennia marina HOM05D005346 ORTHO05D007051 2.1e-08 63.5 163 35.6
Eucgr.E00475 Eucalyptus grandis HOM05D005346 ORTHO05D007051 2.1e-08 63.5 193 31.6
Ciclev10021953m.g Citrus clementina HOM05D005346 ORTHO05D007051 2.7e-08 63.2 144 36.8
GSVIVG01004909001 Vitis vinifera HOM05D005346 ORTHO05D007051 2.7e-08 63.2 192 31.8
AL2G12910 Arabidopsis lyrata HOM05D005346 ORTHO05D007051 3.6e-08 62.8 187 31.6
DCAR_006800 Daucus carota HOM05D005346 ORTHO05D007051 3.6e-08 62.8 120 35.8
Aa31LG2G370 Aethionema arabicum HOM05D005346 ORTHO05D007051 6.1e-08 62.0 196 30.6
A09p15920 Brassica napus HOM05D005346 ORTHO05D007051 6.1e-08 62.0 194 29.9
BraA09t37228Z Brassica rapa HOM05D005346 ORTHO05D007051 6.1e-08 62.0 194 29.9
Duzib084G0498 Durio zibethinus HOM05D005346 ORTHO05D007051 6.1e-08 62.0 194 28.9
Potri.001G117500 Populus trichocarpa HOM05D005346 ORTHO05D007051 6.1e-08 62.0 190 30.5
Manes.01G073500 Manihot esculenta HOM05D005346 ORTHO05D007051 1.0e-07 61.2 191 30.4
Sabra01G0090200 Salix brachista HOM05D005346 ORTHO05D007051 1.4e-07 60.8 122 36.1
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 1.8e-07 60.5 146 35.6
Oeu016508.1 Olea europaea HOM05D005346 ORTHO05D007051 2.3e-07 60.1 187 31.6
PSO478G1917 Papaver somniferum HOM05D005346 ORTHO05D007051 2.3e-07 60.1 122 32.8
SGA_v2.0_scaffold146G36182 Striga asiatica HOM05D005346 ORTHO05D007051 3.0e-07 59.7 193 32.1
TAR629G0085 Trochodendron aralioides HOM05D005346 ORTHO05D007051 3.0e-07 59.7 127 36.2
Gohir.A03G011800 Gossypium hirsutum HOM05D005346 ORTHO05D007051 4.0e-07 59.3 122 35.2
Gorai.003G166600 Gossypium raimondii HOM05D005346 ORTHO05D007051 4.0e-07 59.3 122 35.2
AT1G62850 Arabidopsis thaliana HOM05D005346 ORTHO05D007051 5.2e-07 58.9 188 31.4
Cpa.g.sc29.89 Carica papaya HOM05D005346 ORTHO05D007051 5.2e-07 58.9 199 32.2
CDE11G0613 Ceratophyllum demersum HOM05D005346 ORTHO05D007051 5.2e-07 58.9 128 32.0
COL.COLO4_23877 Corchorus olitorius HOM05D005346 ORTHO05D007051 5.2e-07 58.9 187 29.4
Sabra03G0079900 Salix brachista HOM05D005346 ORTHO05D007051 5.2e-07 58.9 122 35.2
Hund28689 Selenicereus undatus HOM05D005346 ORTHO05D007051 5.2e-07 58.9 185 30.3
Hund28691 Selenicereus undatus HOM05D005346 ORTHO05D007051 5.2e-07 58.9 185 30.3
Thhalv10023661m.g Eutrema salsugineum HOM05D005346 ORTHO05D007051 6.8e-07 58.5 188 32.4
TAR629G0356 Trochodendron aralioides HOM05D005346 ORTHO05D007051 6.8e-07 58.5 127 36.2
Sp2g01760 Schrenkiella parvula HOM05D005346 ORTHO05D007051 1.2e-06 57.8 187 27.8
TWI60G0731 Tripterygium wilfordii HOM05D005346 ORTHO05D007051 1.2e-06 57.8 135 32.6
Gorai.005G179200 Gossypium raimondii HOM05D005346 ORTHO05D007051 1.5e-06 57.4 123 33.3
QL05p030033 Quercus lobata HOM05D005346 ORTHO05D007051 1.5e-06 57.4 195 30.3
QL12p015018 Quercus lobata HOM05D005346 ORTHO05D007051 1.5e-06 57.4 195 30.3
CiPaw.12G104700 Carya illinoinensis HOM05D005346 ORTHO05D007051 2.0e-06 57.0 182 30.8
Lsat_1_v5_gn_6_9800 Lactuca sativa HOM05D005346 ORTHO05D007051 2.0e-06 57.0 146 33.6
RcHm_v2.0_Chr7g0201521 Rosa chinensis HOM05D005346 ORTHO05D007051 2.0e-06 57.0 127 34.6
ATR0579G161 Amborella trichopoda HOM05D005346 ORTHO05D007051 2.6e-06 56.6 149 32.9
PSO782G1275 Papaver somniferum HOM05D005346 ORTHO05D007051 2.6e-06 56.6 122 32.0
HPP92_003521 Vanilla planifolia HOM05D005346 ORTHO05D007051 2.6e-06 56.6 149 30.9
arahy.Tifrunner.gnm1.ann1.FP1HKG Arachis hypogaea HOM05D005346 ORTHO05D007051 3.4e-06 56.2 141 33.3
SGA_v2.0_scaffold196G40944 Striga asiatica HOM05D005346 ORTHO05D007051 4.4e-06 55.8 143 34.3
Gorai.011G192800 Gossypium raimondii HOM05D005346 ORTHO05D007051 5.7e-06 55.5 123 32.5
CANSAT21G2498 Cannabis sativa HOM05D005346 ORTHO05D007051 9.8e-06 54.7 193 30.6
AUR62017389 Chenopodium quinoa HOM05D005346 ORTHO05D007051 9.8e-06 54.7 147 32.0
Gorai.002G177500 Gossypium raimondii HOM05D005346 ORTHO05D007051 9.8e-06 54.7 123 31.7
Lj8A255T54 Lonicera japonica HOM05D005346 ORTHO05D007051 9.8e-06 54.7 199 31.2


User provided reference genes

Program Settings